BLASTX nr result

ID: Dioscorea21_contig00023251 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00023251
         (839 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003527725.1| PREDICTED: F-box-like/WD repeat-containing p...   271   2e-70
ref|XP_003523986.1| PREDICTED: F-box-like/WD repeat-containing p...   269   5e-70
ref|XP_001774815.1| predicted protein [Physcomitrella patens sub...   266   6e-69
ref|XP_003557306.1| PREDICTED: F-box-like/WD repeat-containing p...   258   9e-67
ref|NP_001059429.1| Os07g0405100 [Oryza sativa Japonica Group] g...   258   9e-67

>ref|XP_003527725.1| PREDICTED: F-box-like/WD repeat-containing protein TBL1XR1-like
           [Glycine max]
          Length = 565

 Score =  271 bits (692), Expect = 2e-70
 Identities = 125/197 (63%), Positives = 158/197 (80%)
 Frame = +3

Query: 3   NNTAFATCSEGKMIYICSFGESQPVYAFSEHQDEINAIQWDPTGTLLASCSDDRSVKIWS 182
           NN +FATCS  KMI++C  GE++P+  FS HQDE+NAI+WDP+G+LLASCSDD + KIWS
Sbjct: 369 NNVSFATCSTDKMIHVCKIGENRPIKTFSGHQDEVNAIKWDPSGSLLASCSDDHTAKIWS 428

Query: 183 LELGMCLHDLQGHNEAVYTIKWSPTGPGTINPNKQLVLASA*GDSTIKLWDAHKGHLLRT 362
           L+    LHDL+ H + +YTI+WSPTGPGT +PN+QLVLASA  DSTIKLWD   G++L +
Sbjct: 429 LKQDNFLHDLKEHVKGIYTIRWSPTGPGTNSPNQQLVLASASFDSTIKLWDVELGNVLYS 488

Query: 363 LNGHREAVYSIAFSPNGNYLASGSRDRHLHIWSVKDGSILKTYSRGGAIIYHVSWNREND 542
           LNGHR+ VYS+AFSPNG YLASGS DR+LHIWSVK+G I+KTY+  G  I+ V+WN++ D
Sbjct: 489 LNGHRDPVYSVAFSPNGEYLASGSMDRYLHIWSVKEGKIVKTYTGKGG-IFEVNWNKDGD 547

Query: 543 KVVAGFGNGIVTLIDFR 593
           KV A F N IV ++DFR
Sbjct: 548 KVAACFSNNIVCVLDFR 564



 Score = 68.9 bits (167), Expect = 1e-09
 Identities = 42/135 (31%), Positives = 66/135 (48%), Gaps = 10/135 (7%)
 Frame = +3

Query: 93  HQDEINAIQWDPTGTLLASCSDDRSVKIWSLELGMCLHDLQGHNEAVYTIKWSPTGPGTI 272
           H  E+ A  W+P+  LLAS S D + +IW +  G C   +Q  NE V  +        T 
Sbjct: 216 HTSEVFACAWNPSAPLLASGSGDSTARIWKIADGACDSSVQ--NEPVNVVVLQHFKESTN 273

Query: 273 NPNKQLVLASA*GDSTI----------KLWDAHKGHLLRTLNGHREAVYSIAFSPNGNYL 422
             +K +      GD T+          ++W +  G L  TLN HR  ++S+ ++  G+YL
Sbjct: 274 EKSKDVTTLDWNGDGTLLATGSYDGQARIW-SRDGELNCTLNKHRGPIFSLKWNKKGDYL 332

Query: 423 ASGSRDRHLHIWSVK 467
            SGS D+   +W++K
Sbjct: 333 LSGSVDKTAIVWNIK 347



 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 36/133 (27%), Positives = 62/133 (46%), Gaps = 17/133 (12%)
 Frame = +3

Query: 210 LQGHNEAVYTIKWSPTGPGTINPNKQLVLASA*GDSTIKLWDAHKG-------------- 347
           L+GH   V+   W+P+ P         +LAS  GDST ++W    G              
Sbjct: 213 LKGHTSEVFACAWNPSAP---------LLASGSGDSTARIWKIADGACDSSVQNEPVNVV 263

Query: 348 ---HLLRTLNGHREAVYSIAFSPNGNYLASGSRDRHLHIWSVKDGSILKTYSRGGAIIYH 518
              H   + N   + V ++ ++ +G  LA+GS D    IWS +DG +  T ++    I+ 
Sbjct: 264 VLQHFKESTNEKSKDVTTLDWNGDGTLLATGSYDGQARIWS-RDGELNCTLNKHRGPIFS 322

Query: 519 VSWNRENDKVVAG 557
           + WN++ D +++G
Sbjct: 323 LKWNKKGDYLLSG 335


>ref|XP_003523986.1| PREDICTED: F-box-like/WD repeat-containing protein TBL1XR1-like
           [Glycine max]
          Length = 568

 Score =  269 bits (688), Expect = 5e-70
 Identities = 125/197 (63%), Positives = 157/197 (79%)
 Frame = +3

Query: 3   NNTAFATCSEGKMIYICSFGESQPVYAFSEHQDEINAIQWDPTGTLLASCSDDRSVKIWS 182
           NN +FATCS  KMI++C  GE++P+  FS HQDE+NAI+WDP+G+LLASCSDD + KIWS
Sbjct: 372 NNVSFATCSTDKMIHVCKIGENRPIKTFSGHQDEVNAIKWDPSGSLLASCSDDHTAKIWS 431

Query: 183 LELGMCLHDLQGHNEAVYTIKWSPTGPGTINPNKQLVLASA*GDSTIKLWDAHKGHLLRT 362
           L+    LH+L+ H + +YTI+WSPTGPGT +PN+QLVLASA  DSTIKLWD   G +L T
Sbjct: 432 LKQDNFLHNLKEHVKGIYTIRWSPTGPGTNSPNQQLVLASASFDSTIKLWDVELGSVLYT 491

Query: 363 LNGHREAVYSIAFSPNGNYLASGSRDRHLHIWSVKDGSILKTYSRGGAIIYHVSWNREND 542
           LNGHR+ VYS+AFSPNG YLASGS DR+LHIWSVK+G I+KTY+  G  I+ V+WN++ D
Sbjct: 492 LNGHRDPVYSVAFSPNGEYLASGSMDRYLHIWSVKEGKIVKTYTGKGG-IFEVNWNKDGD 550

Query: 543 KVVAGFGNGIVTLIDFR 593
           KV A F N IV ++DFR
Sbjct: 551 KVAACFSNNIVCVMDFR 567



 Score = 70.5 bits (171), Expect = 5e-10
 Identities = 43/137 (31%), Positives = 67/137 (48%), Gaps = 10/137 (7%)
 Frame = +3

Query: 93  HQDEINAIQWDPTGTLLASCSDDRSVKIWSLELGMCLHDLQGHNEAVYTIKWSPTGPGTI 272
           H  E+ A  W+P+  LLAS S D + +IW +  G C   +Q  NE V  +        T 
Sbjct: 219 HTSEVFACAWNPSAPLLASGSGDSTARIWKIADGTCDSSVQ--NEPVNVVVLQHFKESTN 276

Query: 273 NPNKQLVLASA*GDSTI----------KLWDAHKGHLLRTLNGHREAVYSIAFSPNGNYL 422
             +K +      GD T+          ++W +  G L  TLN HR  ++S+ ++  G+YL
Sbjct: 277 EKSKDVTTLDWNGDGTLLATGSYDGQARIWSS-LGELNCTLNKHRGPIFSLKWNKKGDYL 335

Query: 423 ASGSRDRHLHIWSVKDG 473
            SGS D+   +W++K G
Sbjct: 336 LSGSVDKTAIVWNIKTG 352


>ref|XP_001774815.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162673839|gb|EDQ60356.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 523

 Score =  266 bits (679), Expect = 6e-69
 Identities = 126/197 (63%), Positives = 150/197 (76%)
 Frame = +3

Query: 3   NNTAFATCSEGKMIYICSFGESQPVYAFSEHQDEINAIQWDPTGTLLASCSDDRSVKIWS 182
           NN +FATCS  KMIY+C  G+++PV  F  HQDE+NAI+WDPTGTLLASCSDD + KIWS
Sbjct: 327 NNLSFATCSTDKMIYVCKLGDTRPVKVFQGHQDEVNAIKWDPTGTLLASCSDDFTAKIWS 386

Query: 183 LELGMCLHDLQGHNEAVYTIKWSPTGPGTINPNKQLVLASA*GDSTIKLWDAHKGHLLRT 362
           L+   CLHDL+ H + +YTIKWSPTG G+ NPN+ LVLASA  D+TIKLWD  +G  L +
Sbjct: 387 LKQDRCLHDLKEHTKEIYTIKWSPTGSGSANPNRDLVLASASFDATIKLWDVEQGSQLFS 446

Query: 363 LNGHREAVYSIAFSPNGNYLASGSRDRHLHIWSVKDGSILKTYSRGGAIIYHVSWNREND 542
           L  H E VYS+AFSPNG YLASGS D+ LHIWSVKDGS++KTY RG   I+ V WNRE D
Sbjct: 447 LTHHSEPVYSVAFSPNGEYLASGSFDKCLHIWSVKDGSLVKTY-RGSGGIFEVCWNREGD 505

Query: 543 KVVAGFGNGIVTLIDFR 593
           KV A F N  V ++DFR
Sbjct: 506 KVAACFSNNTVCVLDFR 522



 Score = 68.6 bits (166), Expect = 2e-09
 Identities = 47/160 (29%), Positives = 75/160 (46%), Gaps = 15/160 (9%)
 Frame = +3

Query: 93  HQDEINAIQWDPTGTLLASCSDDRSVKIWSLELG-----------MCLHDLQGH----NE 227
           H  E+    W P+G+LLAS S D + +IWS+  G           + L   +G     ++
Sbjct: 176 HTSEVFICAWSPSGSLLASGSGDSTARIWSISDGPSGNSAAASKPLVLKHFKGKTNEKSK 235

Query: 228 AVYTIKWSPTGPGTINPNKQLVLASA*GDSTIKLWDAHKGHLLRTLNGHREAVYSIAFSP 407
            V T+ W+  G GT+       LA+   D   ++W +  G L  TLN H+  ++S+ ++ 
Sbjct: 236 DVTTLDWN--GEGTL-------LATGSYDGQARIW-SKDGELKNTLNKHKGPIFSLKWNK 285

Query: 408 NGNYLASGSRDRHLHIWSVKDGSILKTYSRGGAIIYHVSW 527
            G+ L SGS D+   IW  K G + + +    A    V W
Sbjct: 286 KGDCLLSGSVDKTAIIWDAKTGDVKQQFEYHTAPTLDVDW 325



 Score = 60.8 bits (146), Expect = 4e-07
 Identities = 38/131 (29%), Positives = 60/131 (45%), Gaps = 15/131 (11%)
 Frame = +3

Query: 210 LQGHNEAVYTIKWSPTGPGTINPNKQLVLASA*GDSTIKLWDAHKG-------------- 347
           L+GH   V+   WSP+G          +LAS  GDST ++W    G              
Sbjct: 173 LEGHTSEVFICAWSPSGS---------LLASGSGDSTARIWSISDGPSGNSAAASKPLVL 223

Query: 348 -HLLRTLNGHREAVYSIAFSPNGNYLASGSRDRHLHIWSVKDGSILKTYSRGGAIIYHVS 524
            H     N   + V ++ ++  G  LA+GS D    IWS KDG +  T ++    I+ + 
Sbjct: 224 KHFKGKTNEKSKDVTTLDWNGEGTLLATGSYDGQARIWS-KDGELKNTLNKHKGPIFSLK 282

Query: 525 WNRENDKVVAG 557
           WN++ D +++G
Sbjct: 283 WNKKGDCLLSG 293


>ref|XP_003557306.1| PREDICTED: F-box-like/WD repeat-containing protein ebi-like isoform
           1 [Brachypodium distachyon]
          Length = 555

 Score =  258 bits (660), Expect = 9e-67
 Identities = 120/197 (60%), Positives = 151/197 (76%)
 Frame = +3

Query: 3   NNTAFATCSEGKMIYICSFGESQPVYAFSEHQDEINAIQWDPTGTLLASCSDDRSVKIWS 182
           NNT+FATCS   MIY+C  G+++PV +FS HQ E+NAI+WDPTG LLASCSDD + KIWS
Sbjct: 359 NNTSFATCSTDNMIYVCKIGDARPVKSFSGHQSEVNAIKWDPTGCLLASCSDDWTAKIWS 418

Query: 183 LELGMCLHDLQGHNEAVYTIKWSPTGPGTINPNKQLVLASA*GDSTIKLWDAHKGHLLRT 362
           L+   C++D + H + +YTI+WSPTGPGT NPN+QL+LASA  DS+IKLW+   G LL +
Sbjct: 419 LKQDKCVYDFKEHTKEIYTIRWSPTGPGTNNPNQQLLLASASFDSSIKLWEVEHGRLLYS 478

Query: 363 LNGHREAVYSIAFSPNGNYLASGSRDRHLHIWSVKDGSILKTYSRGGAIIYHVSWNREND 542
           L GHR+ VYS+AFSP+G YLASGS D+ LHIWSVK+G ILKTY RG   I+ V WN+E  
Sbjct: 479 LAGHRQPVYSVAFSPDGEYLASGSLDQSLHIWSVKEGRILKTY-RGSGGIFEVCWNKEGS 537

Query: 543 KVVAGFGNGIVTLIDFR 593
           K+ A F N  V ++DFR
Sbjct: 538 KIAACFSNNTVCVMDFR 554



 Score = 67.0 bits (162), Expect = 5e-09
 Identities = 49/185 (26%), Positives = 78/185 (42%), Gaps = 16/185 (8%)
 Frame = +3

Query: 66  SQPVYAFSEHQDEINAIQWDPTGTLLASCSDDRSVKIWSLELGMC------------LHD 209
           S  V     H  E+ A  W P G+LLAS S D + +IW++  G C            L  
Sbjct: 198 STDVTVLEGHSSEVFACAWSPAGSLLASGSGDSTARIWTIPDGPCGSIQSSPTSVHVLKH 257

Query: 210 LQGH----NEAVYTIKWSPTGPGTINPNKQLVLASA*GDSTIKLWDAHKGHLLRTLNGHR 377
            +G     ++ V T+ W+  G GT+       LA+   D   ++W +  G L +TL  H+
Sbjct: 258 FKGRTNEKSKDVTTLDWN--GEGTL-------LATGSYDGQARIW-SRDGELKQTLFKHK 307

Query: 378 EAVYSIAFSPNGNYLASGSRDRHLHIWSVKDGSILKTYSRGGAIIYHVSWNRENDKVVAG 557
             ++S+ ++  G++L SGS D+   +W  K     + +    A    V W          
Sbjct: 308 GPIFSLKWNKKGDFLLSGSVDKTAIVWDTKTWECKQQFEFHSAPTLDVDWRNNTSFATCS 367

Query: 558 FGNGI 572
             N I
Sbjct: 368 TDNMI 372


>ref|NP_001059429.1| Os07g0405100 [Oryza sativa Japonica Group]
           gi|113610965|dbj|BAF21343.1| Os07g0405100 [Oryza sativa
           Japonica Group] gi|215767231|dbj|BAG99459.1| unnamed
           protein product [Oryza sativa Japonica Group]
          Length = 555

 Score =  258 bits (660), Expect = 9e-67
 Identities = 120/197 (60%), Positives = 150/197 (76%)
 Frame = +3

Query: 3   NNTAFATCSEGKMIYICSFGESQPVYAFSEHQDEINAIQWDPTGTLLASCSDDRSVKIWS 182
           NN +FATCS   MIY+C  G+ +PV +FS HQ E+NAI+WDPTG+LLASCSDD + KIWS
Sbjct: 359 NNNSFATCSTDNMIYVCKIGDQRPVKSFSGHQSEVNAIKWDPTGSLLASCSDDWTAKIWS 418

Query: 183 LELGMCLHDLQGHNEAVYTIKWSPTGPGTINPNKQLVLASA*GDSTIKLWDAHKGHLLRT 362
           ++   C++D + H + +YTI+WSPTGPGT NPN+QL+LASA  DSTIKLW+  +G LL +
Sbjct: 419 MKQDKCVYDFKEHTKEIYTIRWSPTGPGTNNPNQQLLLASASFDSTIKLWEVEQGRLLYS 478

Query: 363 LNGHREAVYSIAFSPNGNYLASGSRDRHLHIWSVKDGSILKTYSRGGAIIYHVSWNREND 542
           L GHR+ VYS+AFSP G YLASGS D+ LHIWSVK+G ILKTY RG   I+ V WN+E  
Sbjct: 479 LAGHRQPVYSVAFSPGGEYLASGSLDQCLHIWSVKEGRILKTY-RGSGGIFEVCWNKEGS 537

Query: 543 KVVAGFGNGIVTLIDFR 593
           K+ A F N  V L+DFR
Sbjct: 538 KIAACFSNNTVCLMDFR 554



 Score = 69.3 bits (168), Expect = 1e-09
 Identities = 50/186 (26%), Positives = 80/186 (43%), Gaps = 17/186 (9%)
 Frame = +3

Query: 66  SQPVYAFSEHQDEINAIQWDPTGTLLASCSDDRSVKIWSLELGMC-------------LH 206
           S  V     H  E+ A  W P G+LLAS S D + +IW++  G C             L 
Sbjct: 197 SADVTVLEGHSSEVFACAWSPAGSLLASGSGDSTARIWTIPDGPCGSITQSSPPGVHVLK 256

Query: 207 DLQGH----NEAVYTIKWSPTGPGTINPNKQLVLASA*GDSTIKLWDAHKGHLLRTLNGH 374
             +G     ++ V T+ W+  G GT+       LA+   D   ++W++  G L +TL  H
Sbjct: 257 HFKGRTNEKSKDVTTLDWN--GEGTL-------LATGSYDGQARIWNS-DGELKQTLFKH 306

Query: 375 REAVYSIAFSPNGNYLASGSRDRHLHIWSVKDGSILKTYSRGGAIIYHVSWNRENDKVVA 554
           +  ++S+ ++  G++L SGS D+   +W  K     + +    A    V W   N     
Sbjct: 307 KGPIFSLKWNKKGDFLLSGSVDKTAIVWDTKTWECKQQFEFHSAPTLDVDWRNNNSFATC 366

Query: 555 GFGNGI 572
              N I
Sbjct: 367 STDNMI 372


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