BLASTX nr result

ID: Dioscorea21_contig00023152 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00023152
         (857 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263207.2| PREDICTED: DEAD-box ATP-dependent RNA helica...   331   1e-88
emb|CAN65105.1| hypothetical protein VITISV_021046 [Vitis vinifera]   331   1e-88
ref|XP_004139902.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   325   8e-87
ref|XP_002513358.1| dead box ATP-dependent RNA helicase, putativ...   324   1e-86
ref|XP_002311293.1| predicted protein [Populus trichocarpa] gi|2...   320   2e-85

>ref|XP_002263207.2| PREDICTED: DEAD-box ATP-dependent RNA helicase 36-like [Vitis
           vinifera] gi|297736137|emb|CBI24175.3| unnamed protein
           product [Vitis vinifera]
          Length = 489

 Score =  331 bits (848), Expect = 1e-88
 Identities = 155/220 (70%), Positives = 191/220 (86%)
 Frame = -1

Query: 665 FSDLGLSQWATSTCRELGMRCPTDVQRYCIPRILSGSNVTAVALTGSGKTAAFALPILHR 486
           F+DLGL++WA   C+ELGMR PT VQ +CIPRIL+G +V  +A TGSGKTAAFALPILHR
Sbjct: 53  FADLGLAEWAVQACKELGMRRPTPVQHHCIPRILAGDDVLGLAQTGSGKTAAFALPILHR 112

Query: 485 LAEDPFGVYALVLTPTRELAFQLAEQFRALGSSLNVRCTVVVGGMDMTGQARALAQRPHI 306
           LAEDPFGV+ALV+TPTRELA+QLAEQFRALGS L++RC VVVGGMDM  QA+ L QRPH+
Sbjct: 113 LAEDPFGVFALVVTPTRELAYQLAEQFRALGSCLHLRCAVVVGGMDMINQAQTLMQRPHV 172

Query: 305 VVATPGRIKVLLENDPDLPAVFSKAKFLVLDEADRVLDAGFAEELKVIYRCLPRDRQTLL 126
           V+ATPGR+KVLLE +PD+PAVF++ KFLVLDEADRVLD GF EEL+V+++CLP++RQTLL
Sbjct: 173 VIATPGRVKVLLEQNPDIPAVFARTKFLVLDEADRVLDVGFEEELRVVFQCLPKNRQTLL 232

Query: 125 FSATLTDDMEALNEISGDRSYFYRGYKGFNTVDSLNQHYI 6
           FSAT+T D++ L E+S +++YFY  Y+GF TV+SL Q YI
Sbjct: 233 FSATMTSDLQTLLELSSNKAYFYEAYEGFKTVESLKQQYI 272


>emb|CAN65105.1| hypothetical protein VITISV_021046 [Vitis vinifera]
          Length = 592

 Score =  331 bits (848), Expect = 1e-88
 Identities = 155/220 (70%), Positives = 191/220 (86%)
 Frame = -1

Query: 665 FSDLGLSQWATSTCRELGMRCPTDVQRYCIPRILSGSNVTAVALTGSGKTAAFALPILHR 486
           F+DLGL++WA   C+ELGMR PT VQ +CIPRIL+G +V  +A TGSGKTAAFALPILHR
Sbjct: 156 FADLGLAEWAVQACKELGMRRPTPVQHHCIPRILAGDDVLGLAQTGSGKTAAFALPILHR 215

Query: 485 LAEDPFGVYALVLTPTRELAFQLAEQFRALGSSLNVRCTVVVGGMDMTGQARALAQRPHI 306
           LAEDPFGV+ALV+TPTRELA+QLAEQFRALGS L++RC VVVGGMDM  QA+ L QRPH+
Sbjct: 216 LAEDPFGVFALVVTPTRELAYQLAEQFRALGSCLHLRCAVVVGGMDMINQAQTLMQRPHV 275

Query: 305 VVATPGRIKVLLENDPDLPAVFSKAKFLVLDEADRVLDAGFAEELKVIYRCLPRDRQTLL 126
           V+ATPGR+KVLLE +PD+PAVF++ KFLVLDEADRVLD GF EEL+V+++CLP++RQTLL
Sbjct: 276 VIATPGRVKVLLEQNPDIPAVFARTKFLVLDEADRVLDVGFEEELRVVFQCLPKNRQTLL 335

Query: 125 FSATLTDDMEALNEISGDRSYFYRGYKGFNTVDSLNQHYI 6
           FSAT+T D++ L E+S +++YFY  Y+GF TV+SL Q YI
Sbjct: 336 FSATMTSDLQTLLELSSNKAYFYEAYEGFKTVESLKQQYI 375


>ref|XP_004139902.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 36-like [Cucumis
           sativus] gi|449475871|ref|XP_004154575.1| PREDICTED:
           DEAD-box ATP-dependent RNA helicase 36-like [Cucumis
           sativus]
          Length = 491

 Score =  325 bits (833), Expect = 8e-87
 Identities = 156/225 (69%), Positives = 191/225 (84%)
 Frame = -1

Query: 680 TATIAFSDLGLSQWATSTCRELGMRCPTDVQRYCIPRILSGSNVTAVALTGSGKTAAFAL 501
           T  I F+DLGLS+W   TC+EL M+ PT VQ +CIP+IL+G +V  +A TGSGKTAAFAL
Sbjct: 53  TNNITFADLGLSEWIIQTCKELVMKKPTAVQTHCIPKILAGLDVLGIAQTGSGKTAAFAL 112

Query: 500 PILHRLAEDPFGVYALVLTPTRELAFQLAEQFRALGSSLNVRCTVVVGGMDMTGQARALA 321
           PIL RL+E PFGV+ALV+TPTRELA+QLAEQFRALGS LN+RC+VVVGGMDM  Q ++L 
Sbjct: 113 PILQRLSETPFGVFALVVTPTRELAYQLAEQFRALGSCLNLRCSVVVGGMDMLNQTQSLL 172

Query: 320 QRPHIVVATPGRIKVLLENDPDLPAVFSKAKFLVLDEADRVLDAGFAEELKVIYRCLPRD 141
           +RPHIV+ATPGRIKVLLE++PD+P VFSK KFLVLDEADRVLD GF EELKVI++CLPR+
Sbjct: 173 KRPHIVIATPGRIKVLLEDNPDIPVVFSKTKFLVLDEADRVLDVGFEEELKVIFQCLPRN 232

Query: 140 RQTLLFSATLTDDMEALNEISGDRSYFYRGYKGFNTVDSLNQHYI 6
           RQTLLFSAT+T D+E L+++S +++YFY  Y+GF TVD L Q Y+
Sbjct: 233 RQTLLFSATMTKDLETLHKLSANKAYFYEAYEGFKTVDMLKQQYV 277


>ref|XP_002513358.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223547266|gb|EEF48761.1| dead box ATP-dependent RNA
           helicase, putative [Ricinus communis]
          Length = 502

 Score =  324 bits (831), Expect = 1e-86
 Identities = 150/224 (66%), Positives = 192/224 (85%)
 Frame = -1

Query: 674 TIAFSDLGLSQWATSTCRELGMRCPTDVQRYCIPRILSGSNVTAVALTGSGKTAAFALPI 495
           T  FS+LGL++WA  TC+ELGM+ PT VQ +CIP+IL G +V  +A TGSGKTA FALPI
Sbjct: 62  TSLFSNLGLAEWAVRTCKELGMKRPTPVQAHCIPKILEGKDVLGLAQTGSGKTATFALPI 121

Query: 494 LHRLAEDPFGVYALVLTPTRELAFQLAEQFRALGSSLNVRCTVVVGGMDMTGQARALAQR 315
           LHRLAEDP+G++ALV+TPTRELA+QLAEQFRALGS LN+RC VVVGGMD   QA+ L  R
Sbjct: 122 LHRLAEDPYGIFALVITPTRELAYQLAEQFRALGSCLNLRCAVVVGGMDKLTQAKTLMAR 181

Query: 314 PHIVVATPGRIKVLLENDPDLPAVFSKAKFLVLDEADRVLDAGFAEELKVIYRCLPRDRQ 135
           PH+V+ATPGR+KVLLE++PD+P+VFSK KFLVLDEADRVLD GF +EL+V+++CLP++RQ
Sbjct: 182 PHVVIATPGRVKVLLEDNPDIPSVFSKTKFLVLDEADRVLDVGFEDELRVVFQCLPKNRQ 241

Query: 134 TLLFSATLTDDMEALNEISGDRSYFYRGYKGFNTVDSLNQHYIV 3
           TLLFSAT+T ++E+L E+S +++YFY  Y+GF TVD+L Q Y++
Sbjct: 242 TLLFSATMTSNLESLLEVSANKAYFYEAYEGFKTVDTLKQQYVL 285


>ref|XP_002311293.1| predicted protein [Populus trichocarpa] gi|222851113|gb|EEE88660.1|
           predicted protein [Populus trichocarpa]
          Length = 496

 Score =  320 bits (821), Expect = 2e-85
 Identities = 154/223 (69%), Positives = 189/223 (84%)
 Frame = -1

Query: 674 TIAFSDLGLSQWATSTCRELGMRCPTDVQRYCIPRILSGSNVTAVALTGSGKTAAFALPI 495
           T  FSDLGLS+WA  TC+ELGM+ PT VQ +CIP+ILSG +V  +A TGSGKTAAFALPI
Sbjct: 61  TTLFSDLGLSEWALQTCKELGMKNPTQVQSHCIPKILSGRDVLGLAQTGSGKTAAFALPI 120

Query: 494 LHRLAEDPFGVYALVLTPTRELAFQLAEQFRALGSSLNVRCTVVVGGMDMTGQARALAQR 315
           LHRLAEDPFGV+ALV+TPTRELA+QLAEQFRA GS L++RC VVVGGMD+  QA+ L  R
Sbjct: 121 LHRLAEDPFGVFALVITPTRELAYQLAEQFRAFGSCLHLRCAVVVGGMDLLTQAKTLMGR 180

Query: 314 PHIVVATPGRIKVLLENDPDLPAVFSKAKFLVLDEADRVLDAGFAEELKVIYRCLPRDRQ 135
           PH+V+ATPGRIKVLLEN PD+  VFS+ KFLVLDEADR++D GF EEL+V+++CLP+ RQ
Sbjct: 181 PHVVIATPGRIKVLLEN-PDISPVFSRTKFLVLDEADRLIDVGFQEELRVVFKCLPKSRQ 239

Query: 134 TLLFSATLTDDMEALNEISGDRSYFYRGYKGFNTVDSLNQHYI 6
           TLLFSAT+T +++ L E+S +++YFY  Y+GF TVD+LNQ YI
Sbjct: 240 TLLFSATMTSELQTLLELSENKAYFYEEYEGFKTVDTLNQQYI 282


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