BLASTX nr result

ID: Dioscorea21_contig00023105 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00023105
         (436 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAE79384.1| unnamed protein product [Ipomoea batatas]              88   6e-16
dbj|BAE79383.1| unnamed protein product [Ipomoea batatas]              88   6e-16
dbj|BAE79381.1| unnamed protein product [Ipomoea batatas]              88   6e-16
gb|AAD37019.2| putative non-LTR retrolelement reverse transcript...    82   6e-14
ref|XP_003630108.1| hypothetical protein MTR_8g091870 [Medicago ...    80   2e-13

>dbj|BAE79384.1| unnamed protein product [Ipomoea batatas]
          Length = 1898

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 44/136 (32%), Positives = 72/136 (52%)
 Frame = -2

Query: 429 FQPVSARLATAAVWIQLHHLPIELWEGETLECLVSNFGKILKIDDQTLNLSRAKFARVCI 250
           F+P +A+    AVW++L  L +E +  +T++ ++ N GK L +D  T+   R +FAR  +
Sbjct: 177 FKPRTAKFQKMAVWVRLSELSMEYFRDDTIKAILENIGKPLGLDRTTMARERGRFARAAV 236

Query: 249 ELDLTLPLRRGFWTGDDEHKIFVVIQYERLPTFCYKCGIIGHGEASCPSKAAHPSSSSFP 70
           E+DL  PL    W   D  K    ++YE L   C+ CG++GH E +C            P
Sbjct: 237 EIDLDKPLVSEIWVMGDVQK----VEYEGLHVVCFGCGVVGHREQAC------------P 280

Query: 69  VHRPPPPKSTVSGSGS 22
           + RP  P++  +GS +
Sbjct: 281 LARPTAPETMATGSNT 296


>dbj|BAE79383.1| unnamed protein product [Ipomoea batatas]
          Length = 532

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 43/136 (31%), Positives = 73/136 (53%)
 Frame = -2

Query: 429 FQPVSARLATAAVWIQLHHLPIELWEGETLECLVSNFGKILKIDDQTLNLSRAKFARVCI 250
           F+P +A+    AVW++L  L +E +  +T++ ++ N GK L++D  T+   + +FAR  +
Sbjct: 177 FEPRTAKFQKMAVWVRLPELSMEYFRDDTIKAILENIGKPLRLDRTTMAREKGRFARAAV 236

Query: 249 ELDLTLPLRRGFWTGDDEHKIFVVIQYERLPTFCYKCGIIGHGEASCPSKAAHPSSSSFP 70
           E+DL  PL    W   D  K    ++YE L   C+ CG++GH E +C            P
Sbjct: 237 EIDLGKPLVSEIWVMGDVQK----VEYEGLHVVCFGCGVVGHREQAC------------P 280

Query: 69  VHRPPPPKSTVSGSGS 22
           + RP  P++  +GS +
Sbjct: 281 LARPTAPETMATGSNT 296


>dbj|BAE79381.1| unnamed protein product [Ipomoea batatas]
          Length = 532

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 43/136 (31%), Positives = 73/136 (53%)
 Frame = -2

Query: 429 FQPVSARLATAAVWIQLHHLPIELWEGETLECLVSNFGKILKIDDQTLNLSRAKFARVCI 250
           F+P +A+    AVW++L  L +E +  +T++ ++ N GK L++D  T+   + +FAR  +
Sbjct: 177 FKPRTAKFQKMAVWVRLPELSMEYFRDDTIKAILENIGKPLRLDRTTMAREKGRFARAAV 236

Query: 249 ELDLTLPLRRGFWTGDDEHKIFVVIQYERLPTFCYKCGIIGHGEASCPSKAAHPSSSSFP 70
           E+DL  PL    W   D  K    ++YE L   C+ CG++GH E +C            P
Sbjct: 237 EIDLDKPLVSEIWVMGDVQK----VEYEGLHVVCFGCGVVGHREQAC------------P 280

Query: 69  VHRPPPPKSTVSGSGS 22
           + RP  P++  +GS +
Sbjct: 281 LARPTAPETMATGSNT 296


>gb|AAD37019.2| putative non-LTR retrolelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 855

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 41/125 (32%), Positives = 68/125 (54%), Gaps = 4/125 (3%)
 Frame = -2

Query: 429 FQPVSARLATAAVWIQLHHLPIELWEGETLECLVSNFGKILKIDDQTLNLSRAKFARVCI 250
           F P+   + T  +W++L ++P+ L+    L  +  + GK +K+D  TL++ RA+FAR+CI
Sbjct: 129 FDPLRDEITTTPIWVRLMNIPLSLYHTSILMGIAGSLGKPVKVDMTTLHVERARFARMCI 188

Query: 249 ELDLTLPLRRGFWTGDDEHKIFVVIQYERLPTFCYKCGIIGHGEASCP----SKAAHPSS 82
           E+DL  PL+       + +     + YE L   C +CG+ GH   +CP     K  + +S
Sbjct: 189 EVDLAKPLKGTLLLNGERY----FVSYEGLANICSRCGMYGHLIHTCPQTIAEKEVNAAS 244

Query: 81  SSFPV 67
            S PV
Sbjct: 245 QSAPV 249


>ref|XP_003630108.1| hypothetical protein MTR_8g091870 [Medicago truncatula]
           gi|355524130|gb|AET04584.1| hypothetical protein
           MTR_8g091870 [Medicago truncatula]
          Length = 423

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 43/130 (33%), Positives = 64/130 (49%)
 Frame = -2

Query: 429 FQPVSARLATAAVWIQLHHLPIELWEGETLECLVSNFGKILKIDDQTLNLSRAKFARVCI 250
           F   +A++    VW++   L +  ++   L  + S  G+ +K+D  TLN+ R KFARVC+
Sbjct: 112 FASPNAKVERTVVWVRFPGLNLVYYDENFLLAMASAIGRPIKVDTNTLNVERGKFARVCV 171

Query: 249 ELDLTLPLRRGFWTGDDEHKIFVVIQYERLPTFCYKCGIIGHGEASCPSKAAHPSSSSFP 70
           E+DLT P+    W     +K    IQYE L   C  CG  GH   +C  K+     ++  
Sbjct: 172 EIDLTAPVVGKIWVNGHWYK----IQYEWLHLICTNCGCCGHLRRNCSQKSTTLHQAAAT 227

Query: 69  VHRPPPPKST 40
                PP ST
Sbjct: 228 QGSSHPPVST 237


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