BLASTX nr result

ID: Dioscorea21_contig00023102 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00023102
         (566 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633913.1| PREDICTED: rho GTPase-activating protein 4-l...    80   2e-13
dbj|BAJ95643.1| predicted protein [Hordeum vulgare subsp. vulgare]     72   8e-11
ref|XP_002301430.1| predicted protein [Populus trichocarpa] gi|2...    71   1e-10
emb|CAN84111.1| hypothetical protein VITISV_038805 [Vitis vinifera]    69   7e-10
ref|XP_003581556.1| PREDICTED: uncharacterized protein LOC100842...    67   3e-09

>ref|XP_003633913.1| PREDICTED: rho GTPase-activating protein 4-like [Vitis vinifera]
          Length = 474

 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 54/138 (39%), Positives = 72/138 (52%), Gaps = 5/138 (3%)
 Frame = +1

Query: 16  CLESPGDNDKVLSLRSTESIMGEYQQVAIDSSDYGKAALGNFLFSSE-HAFESDKEESFR 192
           C +SP   D   S  S  +I  E  Q      ++    + +FL        ESD EE F 
Sbjct: 339 CTDSPSSKDDPHSSNSNRNISCEQTQDGCAPEEH---TISDFLKPDALDRLESDIEEKFW 395

Query: 193 SFELKSEILEIHELASGKCSPMNGYKNTPQDDSKEDRC----DSGDVEGILDRLNFRRSV 360
           S + KSE  E ++  SG  SP+ G   T      ++RC    ++G+VEGILDRL+ R+ V
Sbjct: 396 SSQQKSEAEEEYQSISGSSSPVVGEAGT-----LKNRCTGEYENGEVEGILDRLSLRKGV 450

Query: 361 RKLCRHPVFQFSKTFKKT 414
           RKLCRHP+F  SK  KKT
Sbjct: 451 RKLCRHPIFHLSKPVKKT 468


>dbj|BAJ95643.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 470

 Score = 71.6 bits (174), Expect = 8e-11
 Identities = 43/136 (31%), Positives = 70/136 (51%), Gaps = 2/136 (1%)
 Frame = +1

Query: 25  SPGDNDKVLSLRSTESIMGEYQQVAIDSSDYGKAALGNFLFSSEHAFESDKEESFRSFEL 204
           SP D D   +L  +++ +    Q  ++      A L +FLFS E A   D + S    + 
Sbjct: 332 SPSDKDAPQALNHSDNPLNCPSQETVERPMISGATLDHFLFSVEQALHQDAQASIGEPK- 390

Query: 205 KSEILEIHELASGKCSPMNGYKNTPQDD--SKEDRCDSGDVEGILDRLNFRRSVRKLCRH 378
           K +    H+  + + SP++   +T   D  S  ++  +  VEG+ DR  FR+ V +LCRH
Sbjct: 391 KCDTGTAHDKYNNEFSPVDSDFSTSNQDGSSSGNKFSNESVEGLFDRFKFRKGVGRLCRH 450

Query: 379 PVFQFSKTFKKTGDFG 426
           PVFQ S++ KK+ + G
Sbjct: 451 PVFQLSRSMKKSDEAG 466


>ref|XP_002301430.1| predicted protein [Populus trichocarpa] gi|222843156|gb|EEE80703.1|
           predicted protein [Populus trichocarpa]
          Length = 419

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 55/149 (36%), Positives = 75/149 (50%), Gaps = 1/149 (0%)
 Frame = +1

Query: 16  CLESPGD-NDKVLSLRSTESIMGEYQQVAIDSSDYGKAALGNFLFSSEHAFESDKEESFR 192
           C  SP D +D   +L S ES        A +    GK +      ++ +  ES+ EE + 
Sbjct: 282 CAASPSDKSDCHSNLNSKESCKISLNARAPEIPTTGKFSRS----ATVNRVESNAEEKYW 337

Query: 193 SFELKSEILEIHELASGKCSPMNGYKNTPQDDSKEDRCDSGDVEGILDRLNFRRSVRKLC 372
           SF+ KS+  E  + AS    P   Y+    D   +   DSGD       L+F + VR+LC
Sbjct: 338 SFQKKSDGEEEFKSASSSSPPF--YEMDSLDSGCKGENDSGDW------LSFSKGVRRLC 389

Query: 373 RHPVFQFSKTFKKTGDFGILNSKGGRREA 459
           RHPVFQ SK  KKT D GI+N++GG  EA
Sbjct: 390 RHPVFQLSKPVKKTRDPGIVNTRGGGGEA 418


>emb|CAN84111.1| hypothetical protein VITISV_038805 [Vitis vinifera]
          Length = 546

 Score = 68.6 bits (166), Expect = 7e-10
 Identities = 39/81 (48%), Positives = 51/81 (62%), Gaps = 4/81 (4%)
 Frame = +1

Query: 166 ESDKEESFRSFELKSEILEIHELASGKCSPMNGYKNTPQDDSKEDRC----DSGDVEGIL 333
           ESD EE F S + KSE  E ++  SG  SP+ G   T      ++RC    ++G+VEGIL
Sbjct: 379 ESDIEEKFWSSQQKSEAEEEYQSISGSSSPVVGEAGT-----LKNRCTGEYENGEVEGIL 433

Query: 334 DRLNFRRSVRKLCRHPVFQFS 396
           DRL+ R+ VRKLCRHP+F  S
Sbjct: 434 DRLSLRKGVRKLCRHPIFHLS 454


>ref|XP_003581556.1| PREDICTED: uncharacterized protein LOC100842108 [Brachypodium
           distachyon]
          Length = 559

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 47/150 (31%), Positives = 67/150 (44%)
 Frame = +1

Query: 10  QFCLESPGDNDKVLSLRSTESIMGEYQQVAIDSSDYGKAALGNFLFSSEHAFESDKEESF 189
           Q C +SP D ++       E       Q + D     KA     LF +E     D   S 
Sbjct: 412 QSCSDSPNDQEEPQMPEHLEKPFSCSNQESTDHPMIDKATSEKLLFEAEQVLHHD---SR 468

Query: 190 RSFELKSEILEIHELASGKCSPMNGYKNTPQDDSKEDRCDSGDVEGILDRLNFRRSVRKL 369
             FE + +    H+      SP+    N  Q +S      S + EG+ DR +FR+ V +L
Sbjct: 469 HGFEGQDKCDMDHKKCHSGVSPLGDEANN-QVNSSGKEFGSRNAEGLFDRFSFRKGVERL 527

Query: 370 CRHPVFQFSKTFKKTGDFGILNSKGGRREA 459
           CRHPVFQ S++ KK+ D  + +   G REA
Sbjct: 528 CRHPVFQLSRSMKKSPDVVVFD---GTREA 554


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