BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00023077
         (1090 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga...   201   3e-49
emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulga...   189   1e-45
gb|ABA98491.1| retrotransposon protein, putative, unclassified [...   184   3e-44
emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulga...   182   1e-43
gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa ...   176   9e-42

>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1369

 Score =  201 bits (511), Expect = 3e-49
 Identities = 115/363 (31%), Positives = 185/363 (50%), Gaps = 5/363 (1%)
 Frame = -3

Query: 1076 RLDRFLANAPWFSTFNNFRINHLARTSSDHCPLFLKSFGASHSNSRI-----FRFDNFWL 912
            RLDRF+AN  W   F    ++HL +  SDH P+     GA  + +R      FRF+  WL
Sbjct: 200  RLDRFVANDLWKIKFPGSFVSHLPKRKSDHVPIVASVKGAQSAATRTKKSKRFRFEAMWL 259

Query: 911  DYDGCHNSVLKAWNIDSSSSHLHAFTHSVARTKHNLIKWRTNGLSSIDTELQNVEKEISV 732
                    V + W   + +        ++ART + L+ W       +  E++  + ++ V
Sbjct: 260  REGESDEVVKETWMRGTDAGI------NLARTANKLLSWSKQKFGHVAKEIRMCQHQMKV 313

Query: 731  IEASISSTAAPDQWNLMWLRSLYNRHKALMRQNAIFWAQRAKTQWLGHGDQNSKFFHNSV 552
            +  S      P + N+M +R+L  R   L ++  ++W QR++  W+  GD+N+KFFH   
Sbjct: 314  LMES-----EPSEDNIMHMRALDARMDELEKREEVYWHQRSRQDWIKSGDKNTKFFHQKA 368

Query: 551  KIKQHRNRISGIKDRSGMYFNDPVGVEGCFLNFYKTLWASSSSLSVDFIFHALPDDFATI 372
              ++ RN +  I++ +G +F D   V  CF ++++ L+ S ++  +D I + +      I
Sbjct: 369  SHREQRNNVRRIRNEAGEWFEDEDDVTECFAHYFENLFQSGNNCEMDPILNIVKPQ---I 425

Query: 371  SDEDGAGLISPVSKREVFLALKSMPRGKSPGPDGLTVEFYVFYWNVIGXXXXXXXXXXXX 192
            +DE G  L +P  + EV  AL  M   K+PGPDG+   FY  +W+ IG            
Sbjct: 426  TDELGTQLDAPFRREEVSAALAQMHPNKAPGPDGMNALFYQHFWDTIGEDVTTKVLNMLN 485

Query: 191  XXXLPNSWGKTYVVLIPKINSPNSVSDFRPISLCNVCYKIISKILSFRLKKILPNLISPE 12
                  +  +T++VLIPK     S  DFRPISLCNV YKI++K+L+ R+K +LP +I   
Sbjct: 486  NVDNIGAVNQTHIVLIPKKKHCESPVDFRPISLCNVLYKIVAKVLANRMKMVLPMVIHES 545

Query: 11   QCG 3
            Q G
Sbjct: 546  QSG 548


>emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1378

 Score =  189 bits (480), Expect = 1e-45
 Identities = 121/362 (33%), Positives = 192/362 (53%), Gaps = 4/362 (1%)
 Frame = -3

Query: 1079 ARLDRFLANAPWFSTFNNFRINHLARTSSDHCPLFLKSFGASHSNSRI--FRFDNFWLDY 906
            ARLDR LAN+ W   F    + +L ++ SDHCP+ + + G +     I  FRF   WL++
Sbjct: 196  ARLDRGLANSEWKLKFTEGVVRNLPKSQSDHCPILISTSGFAPVPRIIKPFRFQAAWLNH 255

Query: 905  DGCHNSVLKAWNIDSSSSHLHAFTHSVARTKHNLIKWRTNGLSSIDTELQNVEKEISVIE 726
                  V K WN D+    +  F  S A     L KW      +I  +   +   IS ++
Sbjct: 256  QVFCEFVRKNWNADAP---IVPFLKSFA---DKLNKWNKEEFYNIFRKKSELWARISGVQ 309

Query: 725  ASISSTAAPDQWNLMWLRSLYNRHKALMRQNA-IFWAQRAKTQWLGHGDQNSKFFHNSVK 549
            A +S+     Q +L+ L +   R   ++  +    W Q+++ + +  GD+N+++FH S  
Sbjct: 310  ALLSTGR---QNHLIKLEAKLRREMDIVLDDEETLWFQKSRMEAICDGDRNTRYFHLSTV 366

Query: 548  IKQHRNRISGIKDRSGMYFNDPVGVEGCFLNFYKTLWASSSSLSVDFIFHALPDDF-ATI 372
            I++ RNRI  +++  G + ++P+ V+   L ++K L++  S   V   F  LP DF   I
Sbjct: 367  IRRSRNRIDMLQNNDGEWISNPMEVKAMVLGYWKHLFSEDS---VQSNFCHLPRDFFPQI 423

Query: 371  SDEDGAGLISPVSKREVFLALKSMPRGKSPGPDGLTVEFYVFYWNVIGXXXXXXXXXXXX 192
            + +D   ++ P+S+ EV LALKSM   K+PGPDG    FY  +W+++             
Sbjct: 424  TADDFEKMMRPLSEVEVTLALKSMKPFKAPGPDGFQPLFYQRFWDLVKPNVMHLVSEILS 483

Query: 191  XXXLPNSWGKTYVVLIPKINSPNSVSDFRPISLCNVCYKIISKILSFRLKKILPNLISPE 12
                P  +  T++VLIPK++ P     FRPI LCN+ YKI++K++  RLK ILP+LISP 
Sbjct: 484  GRDFPEGFNDTFIVLIPKMDIPQLAKHFRPIGLCNIVYKIVTKVIINRLKPILPSLISPT 543

Query: 11   QC 6
            QC
Sbjct: 544  QC 545


>gb|ABA98491.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1621

 Score =  184 bits (467), Expect = 3e-44
 Identities = 114/361 (31%), Positives = 180/361 (49%), Gaps = 5/361 (1%)
 Frame = -3

Query: 1076 RLDRFLANAPWFSTFNNFRINHLARTSSDHCPLFLKSFGAS-----HSNSRIFRFDNFWL 912
            RLDR +AN  W + F   R+ +     SDH P+ ++  G +      +    FRF+  WL
Sbjct: 442  RLDRAVANPEWRAMFPAARVINGDPRHSDHRPVIIELEGKNKGVRGRNGHNDFRFEAAWL 501

Query: 911  DYDGCHNSVLKAWNIDSSSSHLHAFTHSVARTKHNLIKWRTNGLSSIDTELQNVEKEISV 732
            + +     V +AW++ +    L     S+A     L  W +N L  ++  ++ V+KE+  
Sbjct: 502  EEEKFKEVVKEAWDVSAGLQGLPVHA-SLAGVAAGLSSWSSNVLGDLEKRVKKVKKEL-- 558

Query: 731  IEASISSTAAPDQWNLMWLRSLYNRHKALMRQNAIFWAQRAKTQWLGHGDQNSKFFHNSV 552
             E       + DQ  ++    L  R + L +Q  I+W QRA T WL  GD+N+ FFH S 
Sbjct: 559  -ETCRRQPISRDQ--VVREEVLRYRLEKLEQQVDIYWKQRAHTNWLNKGDRNTSFFHASC 615

Query: 551  KIKQHRNRISGIKDRSGMYFNDPVGVEGCFLNFYKTLWASSSSLSVDFIFHALPDDFATI 372
              ++ RNRI+ ++   G +           + F+K L+ S+   +   +   +    +  
Sbjct: 616  SERRRRNRINKLRREDGSWVEREEDKRAMIIEFFKQLFTSNGGQNSQKLLDVVDRKVSGA 675

Query: 371  SDEDGAGLISPVSKREVFLALKSMPRGKSPGPDGLTVEFYVFYWNVIGXXXXXXXXXXXX 192
             +E    L +  ++ EV  AL ++   K+PGPDG+   FY   W+V+G            
Sbjct: 676  MNES---LRAEFTREEVKEALDAIGDLKAPGPDGMPAGFYKACWDVVGEKVTDEVLEVLR 732

Query: 191  XXXLPNSWGKTYVVLIPKINSPNSVSDFRPISLCNVCYKIISKILSFRLKKILPNLISPE 12
               +P  W    +VLIPK+  P  + D RPISLCNVCYK++SK+L+ RLKKILP++ISP 
Sbjct: 733  GGAIPEGWNDITIVLIPKVKKPELIKDLRPISLCNVCYKLVSKVLANRLKKILPDVISPA 792

Query: 11   Q 9
            Q
Sbjct: 793  Q 793


>emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1355

 Score =  182 bits (463), Expect = 1e-43
 Identities = 107/362 (29%), Positives = 182/362 (50%), Gaps = 6/362 (1%)
 Frame = -3

Query: 1076 RLDRFLANAPWFSTFNNFRINHLARTSSDHCPLFLKS--FGASHSNSRIFRFDNFWLDYD 903
            RLDR+L +  W   + +    H  R  SDH  + L+S   G     +R   F+  WL  D
Sbjct: 194  RLDRYLCSNSWLDLYPDSVPEHTIRYKSDHSAIVLRSQRAGRPRGKTRRLHFETSWLLDD 253

Query: 902  GCHNSVLKAWNIDSSSSHLHAFTHSVARTKHNLIKWRTNGLSSIDTELQNVEKEISVIEA 723
             C   V ++W     +S     T  VA     L++W T    ++  +++  EK +SV + 
Sbjct: 254  ECEAVVRESWE----NSEGEVMTGRVASMGQCLVRWSTKKFKNLSKQIETAEKALSVAQN 309

Query: 722  SISSTAAPDQWNLMW--LRSLYNRHKALMRQNAIFWAQRAKTQWLGHGDQNSKFFHNSVK 549
            +  S +A  +  L+   L  L+ +H+A       +W  R++   +  GD+N+K+FH+   
Sbjct: 310  NPISESACQECVLLEKKLDELHAKHEA-------YWYLRSRVAEVKDGDKNTKYFHHKAS 362

Query: 548  IKQHRNRISGIKDRSGMYFNDPVGVEGCFLNFYKTLWASS--SSLSVDFIFHALPDDFAT 375
             ++ RN + G+ D  G +  +   +E  F +++ +++ SS  S LS++ +   +      
Sbjct: 363  QRKKRNFVKGLFDGLGTWREEADHIENIFTSYFSSIFTSSNPSDLSLEAVMSVIEP---V 419

Query: 374  ISDEDGAGLISPVSKREVFLALKSMPRGKSPGPDGLTVEFYVFYWNVIGXXXXXXXXXXX 195
            +++E    L+ P SK E+  AL+ M   K+PGPDG+ V FY  +W+++G           
Sbjct: 420  VTEEHNLKLLEPFSKDEILAALQQMHPCKAPGPDGMHVIFYQRFWHIVGDDVTSFISNIL 479

Query: 194  XXXXLPNSWGKTYVVLIPKINSPNSVSDFRPISLCNVCYKIISKILSFRLKKILPNLISP 15
                 P+    T + LIPK+ +P   ++FRPI+LCNV YK++SK +  RLK  LP +IS 
Sbjct: 480  HGHSSPSCVNNTNIALIPKVKNPTKAAEFRPIALCNVLYKLMSKAIVMRLKSFLPEIISE 539

Query: 14   EQ 9
             Q
Sbjct: 540  NQ 541


>gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
          Length = 1747

 Score =  176 bits (446), Expect = 9e-42
 Identities = 102/362 (28%), Positives = 171/362 (47%), Gaps = 6/362 (1%)
 Frame = -3

Query: 1076 RLDRFLANAPWFSTFNNFRINHLARTSSDHCPLFLK-----SFGASHSNSRIFRFDNFWL 912
            RLDR   N      +     +HL   SSDHCPL  +     S G +    R F F++ WL
Sbjct: 478  RLDRGFGNLALIQQWGGISCHHLVSMSSDHCPLLFENDPPMSRGGNWRRKRRFLFEDMWL 537

Query: 911  DYDGCHNSVLKAWNIDSSSSHLHAFTHSVARTKHNLIKWRTNGLSSIDTELQNVEKEISV 732
             ++GC   V + W    +S         + +    L +W      S+  ++ ++ +E+ V
Sbjct: 538  THEGCRGVVERQWLFGVNS-----VVGKLEQVAGGLKRWNQETFGSVKKKVASLREELDV 592

Query: 731  IEASISSTAAPDQWNLMWLRSLYN-RHKALMRQNAIFWAQRAKTQWLGHGDQNSKFFHNS 555
            ++        P   N++  R+        ++ +  + W QRA+  W   GD+N++FFH +
Sbjct: 593  LQRQ------PPTSNIICKRNEVECLLDGVLEREELLWKQRARVSWFKCGDRNTQFFHQT 646

Query: 554  VKIKQHRNRISGIKDRSGMYFNDPVGVEGCFLNFYKTLWASSSSLSVDFIFHALPDDFAT 375
             K +   NRI GI      + +D   +   F+++++ L+ +      + IF A+      
Sbjct: 647  AKQRGRSNRICGILGEDNRWRSDVTDIGCVFVSYFRNLFTAGGGSMDETIFEAVTSRVDA 706

Query: 374  ISDEDGAGLISPVSKREVFLALKSMPRGKSPGPDGLTVEFYVFYWNVIGXXXXXXXXXXX 195
             S +    L     + E+ LALK M   KSPG DG+   F+  +WN+IG           
Sbjct: 707  TSKKS---LDQVYRREEIELALKDMNPSKSPGSDGMPARFFQKFWNIIGNDVVDVCLRFL 763

Query: 194  XXXXLPNSWGKTYVVLIPKINSPNSVSDFRPISLCNVCYKIISKILSFRLKKILPNLISP 15
                    +  + + LIPK+ +P  V+++RPISLCNV YK++SK+L+ RLK +LP +I+ 
Sbjct: 764  NGDGSIADFNHSLIALIPKVQNPKKVTEYRPISLCNVVYKLVSKVLANRLKSVLPEVIAE 823

Query: 14   EQ 9
             Q
Sbjct: 824  NQ 825