BLASTX nr result

ID: Dioscorea21_contig00023062 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00023062
         (285 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278289.1| PREDICTED: cytoplasmic tRNA 2-thiolation pro...    92   4e-17
emb|CAN82223.1| hypothetical protein VITISV_011871 [Vitis vinifera]    92   4e-17
ref|NP_001145697.1| uncharacterized protein LOC100279201 [Zea ma...    87   1e-15
ref|XP_002443457.1| hypothetical protein SORBIDRAFT_08g019770 [S...    87   2e-15
gb|ACG36883.1| hypothetical protein [Zea mays]                         86   2e-15

>ref|XP_002278289.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 2 [Vitis vinifera]
           gi|297739656|emb|CBI29838.3| unnamed protein product
           [Vitis vinifera]
          Length = 468

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 47/77 (61%), Positives = 55/77 (71%), Gaps = 11/77 (14%)
 Frame = +2

Query: 86  CSKCGAEERFYSS-----------MCAVCFRGHVFGKFKLAVTNNAMISPSDNLLVAFSG 232
           C KC   E   SS            C  CFRG++FGKFKLAVT+NAMISP+DN+LVAFSG
Sbjct: 47  CLKCKVNETLASSGTVSVDGDIGRFCFDCFRGNLFGKFKLAVTSNAMISPTDNVLVAFSG 106

Query: 233 GHASRVALQFIHEMQYK 283
           G +SRVALQF+HEMQ+K
Sbjct: 107 GPSSRVALQFVHEMQHK 123


>emb|CAN82223.1| hypothetical protein VITISV_011871 [Vitis vinifera]
          Length = 747

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 47/77 (61%), Positives = 55/77 (71%), Gaps = 11/77 (14%)
 Frame = +2

Query: 86  CSKCGAEERFYSS-----------MCAVCFRGHVFGKFKLAVTNNAMISPSDNLLVAFSG 232
           C KC   E   SS            C  CFRG++FGKFKLAVT+NAMISP+DN+LVAFSG
Sbjct: 47  CLKCKVNETLASSGTVSVDGDIGRFCFDCFRGNLFGKFKLAVTSNAMISPTDNVLVAFSG 106

Query: 233 GHASRVALQFIHEMQYK 283
           G +SRVALQF+HEMQ+K
Sbjct: 107 GPSSRVALQFVHEMQHK 123


>ref|NP_001145697.1| uncharacterized protein LOC100279201 [Zea mays]
           gi|219884057|gb|ACL52403.1| unknown [Zea mays]
           gi|414877867|tpg|DAA54998.1| TPA: hypothetical protein
           ZEAMMB73_001329 [Zea mays]
          Length = 460

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 44/73 (60%), Positives = 52/73 (71%), Gaps = 5/73 (6%)
 Frame = +2

Query: 80  APCSKCGAEERFYS-----SMCAVCFRGHVFGKFKLAVTNNAMISPSDNLLVAFSGGHAS 244
           A C KC       +      MCA CFR H+FGKFKL+VT+NAM+ P+D +L+AFSGG AS
Sbjct: 40  AACGKCDGGGAAVAVAGGVGMCAGCFRAHLFGKFKLSVTSNAMVRPTDAVLLAFSGGPAS 99

Query: 245 RVALQFIHEMQYK 283
           RVALQFIHEMQ K
Sbjct: 100 RVALQFIHEMQSK 112


>ref|XP_002443457.1| hypothetical protein SORBIDRAFT_08g019770 [Sorghum bicolor]
           gi|241944150|gb|EES17295.1| hypothetical protein
           SORBIDRAFT_08g019770 [Sorghum bicolor]
          Length = 463

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 44/73 (60%), Positives = 51/73 (69%), Gaps = 5/73 (6%)
 Frame = +2

Query: 80  APCSKCGAEERFYS-----SMCAVCFRGHVFGKFKLAVTNNAMISPSDNLLVAFSGGHAS 244
           A C KC       +      MC  CFR H+FGKFKLAVT+NAM+ P+D +L+AFSGG AS
Sbjct: 45  ATCGKCDGGGAAVAVAGGVGMCVDCFRAHLFGKFKLAVTSNAMVRPTDAVLLAFSGGPAS 104

Query: 245 RVALQFIHEMQYK 283
           RVALQFIHEMQ K
Sbjct: 105 RVALQFIHEMQSK 117


>gb|ACG36883.1| hypothetical protein [Zea mays]
          Length = 462

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 44/73 (60%), Positives = 52/73 (71%), Gaps = 5/73 (6%)
 Frame = +2

Query: 80  APCSKCGAEERFYS-----SMCAVCFRGHVFGKFKLAVTNNAMISPSDNLLVAFSGGHAS 244
           A C KC       +      MCA CFR H+FGKFKL+VT+NAM+ P+D +L+AFSGG AS
Sbjct: 42  AACGKCDGGGAAVAVAGGVGMCAGCFRTHLFGKFKLSVTSNAMVRPTDAVLLAFSGGPAS 101

Query: 245 RVALQFIHEMQYK 283
           RVALQFIHEMQ K
Sbjct: 102 RVALQFIHEMQSK 114


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