BLASTX nr result

ID: Dioscorea21_contig00023047 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00023047
         (264 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527150.1| pentatricopeptide repeat-containing protein,...    60   2e-07
ref|XP_003630933.1| Tau class glutathione S-transferase [Medicag...    59   3e-07
gb|AAP86200.1| pentatricopeptide repeat-containing protein [Raph...    59   5e-07
dbj|BAK04455.1| predicted protein [Hordeum vulgare subsp. vulgare]     58   7e-07
emb|CAZ44330.1| homologue to restoring pentatricopeptide repeat ...    58   7e-07

>ref|XP_002527150.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223533489|gb|EEF35232.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 874

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 25/88 (28%), Positives = 50/88 (56%)
 Frame = -1

Query: 264 LSHGYFKSAECCDVETLLHHIADNEIEPDALTNACMLHGYHRTGQLREAQNIVRRMAEKK 85
           L HGY    +  +   LLH +  N   P+  T   +LH   + G++ EA+N++++M EK 
Sbjct: 402 LLHGYCSKGKVFEANNLLHEMISNNCSPNTYTCNVLLHSLWKEGRISEAENLLQKMNEKG 461

Query: 84  FCTNVIYYNAMLLGLCINGEIKESIKLI 1
           +  + +  N ++  LC NG++ ++I+++
Sbjct: 462 YGVDTVTCNIIINALCNNGQLDKAIEIV 489


>ref|XP_003630933.1| Tau class glutathione S-transferase [Medicago truncatula]
           gi|355524955|gb|AET05409.1| Tau class glutathione
           S-transferase [Medicago truncatula]
          Length = 1320

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 27/86 (31%), Positives = 49/86 (56%)
 Frame = -1

Query: 258 HGYFKSAECCDVETLLHHIADNEIEPDALTNACMLHGYHRTGQLREAQNIVRRMAEKKFC 79
           HG  KS +  +   + + +    +EPD +T   ++ GY + G+++EA ++  +M +K   
Sbjct: 390 HGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLT 449

Query: 78  TNVIYYNAMLLGLCINGEIKESIKLI 1
            NV+ Y A+  GLC NGEI  + +L+
Sbjct: 450 PNVVTYTALADGLCKNGEIDVANELL 475


>gb|AAP86200.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
          Length = 654

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 25/84 (29%), Positives = 49/84 (58%)
 Frame = -1

Query: 255 GYFKSAECCDVETLLHHIADNEIEPDALTNACMLHGYHRTGQLREAQNIVRRMAEKKFCT 76
           GY ++    D   LLH + +  +  + +T   ++HG+ + G L  AQ++++ M     C 
Sbjct: 370 GYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCP 429

Query: 75  NVIYYNAMLLGLCINGEIKESIKL 4
           NV+  N +L GLC NG++K+++++
Sbjct: 430 NVVTCNTLLDGLCDNGKLKDALEM 453


>dbj|BAK04455.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 860

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 25/73 (34%), Positives = 42/73 (57%)
 Frame = -1

Query: 222 ETLLHHIADNEIEPDALTNACMLHGYHRTGQLREAQNIVRRMAEKKFCTNVIYYNAMLLG 43
           E +L  +  N  +PD +T  CM+HGY   G+L+EA  + R+M  +    N++  N+ L  
Sbjct: 320 ELVLRQMTTNGAQPDTVTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLAS 379

Query: 42  LCINGEIKESIKL 4
           LC +G  KE+ ++
Sbjct: 380 LCKHGRSKEAAEI 392


>emb|CAZ44330.1| homologue to restoring pentatricopeptide repeat protein [Raphanus
           sativus]
          Length = 686

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 25/84 (29%), Positives = 49/84 (58%)
 Frame = -1

Query: 255 GYFKSAECCDVETLLHHIADNEIEPDALTNACMLHGYHRTGQLREAQNIVRRMAEKKFCT 76
           GY ++    D   LLH + +  +  + +T   ++HG+ + G L  AQ++++ M     C 
Sbjct: 402 GYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCP 461

Query: 75  NVIYYNAMLLGLCINGEIKESIKL 4
           NV+  N +L GLC NG++K+++++
Sbjct: 462 NVVTCNTLLDGLCDNGKLKDALEM 485


Top