BLASTX nr result

ID: Dioscorea21_contig00023040 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00023040
         (413 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EAY74500.1| hypothetical protein OsI_02392 [Oryza sativa Indi...    75   5e-12
ref|NP_001044175.1| Os01g0736500 [Oryza sativa Japonica Group] g...    75   5e-12
ref|XP_003567090.1| PREDICTED: uncharacterized protein LOC100841...    74   2e-11
ref|XP_002456318.1| hypothetical protein SORBIDRAFT_03g033900 [S...    73   2e-11
tpg|DAA57751.1| TPA: harpin-induced protein [Zea mays]                 71   1e-10

>gb|EAY74500.1| hypothetical protein OsI_02392 [Oryza sativa Indica Group]
          Length = 251

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 40/85 (47%), Positives = 60/85 (70%), Gaps = 2/85 (2%)
 Frame = -1

Query: 413 GSHSTARMNVTVDVLADQVAKTRFNFSFV-GTSVNLTSFTDINGRVNVWGIYKRDIEILL 237
           G+ ST RMNVT+DVLAD+++        + G   NLTS+T+I+GRVNV GIYKR+++I +
Sbjct: 166 GADSTVRMNVTLDVLADRISPNVNATDLIFGQDYNLTSYTEISGRVNVLGIYKRNLDIKM 225

Query: 236 NCSMTVDLSIVGQ-DVKNKVCQANV 165
           NCS+T+++S +     K+  C A+V
Sbjct: 226 NCSITLEVSALSTVQSKSTNCVASV 250


>ref|NP_001044175.1| Os01g0736500 [Oryza sativa Japonica Group]
           gi|15624041|dbj|BAB68095.1| unknown protein [Oryza
           sativa Japonica Group] gi|20160499|dbj|BAB89450.1|
           unknown protein [Oryza sativa Japonica Group]
           gi|113533706|dbj|BAF06089.1| Os01g0736500 [Oryza sativa
           Japonica Group] gi|215767000|dbj|BAG99228.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|222619217|gb|EEE55349.1| hypothetical protein
           OsJ_03374 [Oryza sativa Japonica Group]
          Length = 251

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 40/85 (47%), Positives = 60/85 (70%), Gaps = 2/85 (2%)
 Frame = -1

Query: 413 GSHSTARMNVTVDVLADQVAKTRFNFSFV-GTSVNLTSFTDINGRVNVWGIYKRDIEILL 237
           G+ ST RMNVT+DVLAD+++        + G   NLTS+T+I+GRVNV GIYKR+++I +
Sbjct: 166 GADSTVRMNVTLDVLADRISPNVNATDLIFGQGYNLTSYTEISGRVNVLGIYKRNLDIKM 225

Query: 236 NCSMTVDLSIVGQ-DVKNKVCQANV 165
           NCS+T+++S +     K+  C A+V
Sbjct: 226 NCSITLEVSALSTVQSKSTNCVASV 250


>ref|XP_003567090.1| PREDICTED: uncharacterized protein LOC100841021 [Brachypodium
           distachyon]
          Length = 261

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 39/86 (45%), Positives = 57/86 (66%), Gaps = 2/86 (2%)
 Frame = -1

Query: 413 GSHSTARMNVTVDVLADQVAK-TRFNFSFVGTSVNLTSFTDINGRVNVWGIYKRDIEILL 237
           G+  T RMNVT+D LAD+++    F     G   +LTS+T+I+G+VNV GIYKRD+ I +
Sbjct: 176 GAGQTLRMNVTLDALADRISPHVNFTDLIFGQDYDLTSYTEISGKVNVLGIYKRDLYIKV 235

Query: 236 NCSMTVDLSIVGQ-DVKNKVCQANVR 162
           NCS+T+++S+      K   C A+VR
Sbjct: 236 NCSITLEVSVFNSVQSKTTDCVADVR 261


>ref|XP_002456318.1| hypothetical protein SORBIDRAFT_03g033900 [Sorghum bicolor]
           gi|241928293|gb|EES01438.1| hypothetical protein
           SORBIDRAFT_03g033900 [Sorghum bicolor]
          Length = 257

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 40/86 (46%), Positives = 60/86 (69%), Gaps = 3/86 (3%)
 Frame = -1

Query: 413 GSHSTARMNVTVDVLADQVAKTRFNFSFV-GTSVNLTSFTDINGRVNVWGIYKRDIEILL 237
           G+  TARMNVT+DVLAD+V+      + + G   N+TS+T+INGRV+V GIYKRD++I +
Sbjct: 172 GADRTARMNVTLDVLADRVSPNANTTALIFGQVYNITSYTEINGRVDVLGIYKRDLDIKM 231

Query: 236 NCSMTVDLSIVGQDVKNKV--CQANV 165
           NC++ +++      V++K   C ANV
Sbjct: 232 NCTIMLEVGAF-SSVQSKATNCVANV 256


>tpg|DAA57751.1| TPA: harpin-induced protein [Zea mays]
          Length = 253

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 39/85 (45%), Positives = 57/85 (67%), Gaps = 2/85 (2%)
 Frame = -1

Query: 413 GSHSTARMNVTVDVLADQVAKTRFNFSFV-GTSVNLTSFTDINGRVNVWGIYKRDIEILL 237
           G+  T RMNVT+DVLAD+V+ +      + G   NLTS+T+I GR++V GIYKRD++I +
Sbjct: 168 GADRTVRMNVTLDVLADRVSPSVNATDLIFGKEYNLTSYTEIAGRISVLGIYKRDLDIKM 227

Query: 236 NCSMTVDL-SIVGQDVKNKVCQANV 165
           NCS+T+++ +      K   C ANV
Sbjct: 228 NCSITLEVGAFTTVQSKATDCVANV 252


Top