BLASTX nr result
ID: Dioscorea21_contig00023037
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00023037 (266 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002282912.2| PREDICTED: pentatricopeptide repeat-containi... 78 7e-13 emb|CAN78822.1| hypothetical protein VITISV_006669 [Vitis vinifera] 78 9e-13 ref|XP_004154678.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 76 3e-12 ref|XP_004139112.1| PREDICTED: pentatricopeptide repeat-containi... 76 3e-12 ref|XP_003605160.1| Pentatricopeptide repeat-containing protein ... 73 2e-11 >ref|XP_002282912.2| PREDICTED: pentatricopeptide repeat-containing protein At2g22410, mitochondrial-like [Vitis vinifera] Length = 642 Score = 78.2 bits (191), Expect = 7e-13 Identities = 35/55 (63%), Positives = 46/55 (83%) Frame = +2 Query: 2 ADKVWELMKQKGVEKTPGCSLIEVDGMVHEFIVRDKSHQEGKEIYACLTQLAKQI 166 A K +LM+Q+GVEKTPGCS IEV+G+V+EFIVRDKSH + ++IY CL QL +Q+ Sbjct: 562 AGKARKLMRQRGVEKTPGCSSIEVNGIVYEFIVRDKSHPQSEQIYECLIQLTRQL 616 >emb|CAN78822.1| hypothetical protein VITISV_006669 [Vitis vinifera] Length = 599 Score = 77.8 bits (190), Expect = 9e-13 Identities = 35/55 (63%), Positives = 46/55 (83%) Frame = +2 Query: 2 ADKVWELMKQKGVEKTPGCSLIEVDGMVHEFIVRDKSHQEGKEIYACLTQLAKQI 166 A K +LM+Q+GVEKTPGCS IEV+G+V+EFIVRDKSH + ++IY CL QL +Q+ Sbjct: 519 AGKXRKLMRQRGVEKTPGCSSIEVNGIVYEFIVRDKSHPQSEQIYECLIQLTRQL 573 >ref|XP_004154678.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At2g22410, mitochondrial-like [Cucumis sativus] Length = 681 Score = 75.9 bits (185), Expect = 3e-12 Identities = 32/55 (58%), Positives = 48/55 (87%) Frame = +2 Query: 2 ADKVWELMKQKGVEKTPGCSLIEVDGMVHEFIVRDKSHQEGKEIYACLTQLAKQI 166 A KV ++M+++GVEKTPGCS IE++G+V++FI+RDKSH + ++IY CLT+L +QI Sbjct: 610 ARKVRKMMEERGVEKTPGCSSIEMNGLVYDFIIRDKSHPQSEKIYECLTRLTRQI 664 >ref|XP_004139112.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410, mitochondrial-like [Cucumis sativus] Length = 681 Score = 75.9 bits (185), Expect = 3e-12 Identities = 32/55 (58%), Positives = 48/55 (87%) Frame = +2 Query: 2 ADKVWELMKQKGVEKTPGCSLIEVDGMVHEFIVRDKSHQEGKEIYACLTQLAKQI 166 A KV ++M+++GVEKTPGCS IE++G+V++FI+RDKSH + ++IY CLT+L +QI Sbjct: 610 ARKVRKMMEERGVEKTPGCSSIEMNGLVYDFIIRDKSHPQSEKIYECLTRLTRQI 664 >ref|XP_003605160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula] gi|355506215|gb|AES87357.1| Pentatricopeptide repeat-containing protein [Medicago truncatula] Length = 1026 Score = 73.2 bits (178), Expect = 2e-11 Identities = 31/51 (60%), Positives = 41/51 (80%) Frame = +2 Query: 17 ELMKQKGVEKTPGCSLIEVDGMVHEFIVRDKSHQEGKEIYACLTQLAKQIN 169 +LM KGVEKTPGCSL+E++G+VHEF+VRD SH + + IY CL L KQ++ Sbjct: 618 KLMNDKGVEKTPGCSLVEINGIVHEFVVRDVSHPQSEWIYECLVTLTKQLD 668