BLASTX nr result

ID: Dioscorea21_contig00023035 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00023035
         (738 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002446004.1| hypothetical protein SORBIDRAFT_06g000420 [S...    59   8e-07
ref|XP_003568192.1| PREDICTED: uncharacterized protein LOC100832...    59   1e-06
ref|NP_001046932.1| Os02g0510300 [Oryza sativa Japonica Group] g...    57   4e-06
gb|EEE57061.1| hypothetical protein OsJ_06871 [Oryza sativa Japo...    57   4e-06
gb|EAY86004.1| hypothetical protein OsI_07365 [Oryza sativa Indi...    57   5e-06

>ref|XP_002446004.1| hypothetical protein SORBIDRAFT_06g000420 [Sorghum bicolor]
           gi|241937187|gb|EES10332.1| hypothetical protein
           SORBIDRAFT_06g000420 [Sorghum bicolor]
          Length = 316

 Score = 59.3 bits (142), Expect = 8e-07
 Identities = 56/194 (28%), Positives = 75/194 (38%), Gaps = 17/194 (8%)
 Frame = +2

Query: 53  NLQMHYPPHTPIQQFHVNQSPNQSSQMYYPPGGS-WRHPGQF----GAXXXXXXXXXXXX 217
           N   +YPP    QQ   +Q  + S      PG S WR P QF                  
Sbjct: 106 NYGSNYPPR---QQHIPSQVHSPSLMPQDAPGNSPWRSPMQFQDPMSGYQGAPPRAPPSW 162

Query: 218 XXXXXXXXXXXXFTSPTWG----SSGRGRNPMGYSGRGR-FHSIHESRHTNXXXXXXXXX 382
                         SP +G    + GRG +PM Y  RG  + S    R  N         
Sbjct: 163 GSHCGPRGRGPYSNSPNFGFRHPNPGRGGSPMNYGPRGGPYSSYGRGREPNYFGNPGSRG 222

Query: 383 XXXXXXXXAQR----ETEQLYNKSMLVDPWQNLKPVVGNILVPLAGPD---FWLPKSLQA 541
                    Q     +    +NKSML DPW +L+P VGNIL+P A  D    WLP+SL+ 
Sbjct: 223 RGGRGGVGFQNHPGWQGRSYFNKSMLDDPWLDLQPAVGNILIPRAEYDSNKSWLPESLRK 282

Query: 542 KKAKVVESGTETSN 583
           +K    +   +T++
Sbjct: 283 RKETPAQGQIKTTS 296


>ref|XP_003568192.1| PREDICTED: uncharacterized protein LOC100832764 [Brachypodium
           distachyon]
          Length = 305

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 56/202 (27%), Positives = 80/202 (39%), Gaps = 24/202 (11%)
 Frame = +2

Query: 14  PAQQFQVNQSPNQNLQMHYPP---------HTPIQQFHVNQSPNQSSQMYYP--PGGS-W 157
           P   F    +P++    H PP         + P  Q H+ +SP  S     P  PG S W
Sbjct: 73  PGAAFSSAAAPHKRKSAHSPPPGSGNYGNNYPPPHQQHMPRSPIHSPFPMAPGTPGNSQW 132

Query: 158 RHPGQFGAXXXXXXXXXXXXXXXXXXXXXXXXFT----SPTWG----SSGRGRNPMGYSG 313
           +   QF                                 P++G    + GRG  PM +  
Sbjct: 133 QSHMQFQTPMSGYRGTHPGPPPQWNPHSASPAQVYHPHPPSYGFRGPNVGRGGTPMNFVP 192

Query: 314 RGR-FHSIHESRHTNXXXXXXXXXXXXXXXXXAQ--RETEQLYNKSMLVDPWQNLKPVVG 484
           RG  + S  + R  N                     ++    Y+KSM+ DPWQ+L+P+VG
Sbjct: 193 RGSPYPSPGQGRGGNYYSNPGSRGKGGRGFQNHSGWQDRRNYYSKSMVDDPWQDLQPIVG 252

Query: 485 NILVPL-AGPDFWLPKSLQAKK 547
           NI++P+ A    WLPKSL+AKK
Sbjct: 253 NIMIPVGAASQSWLPKSLRAKK 274


>ref|NP_001046932.1| Os02g0510300 [Oryza sativa Japonica Group]
           gi|48716468|dbj|BAD23074.1| unknown protein [Oryza
           sativa Japonica Group] gi|48716976|dbj|BAD23669.1|
           unknown protein [Oryza sativa Japonica Group]
           gi|113536463|dbj|BAF08846.1| Os02g0510300 [Oryza sativa
           Japonica Group] gi|215695493|dbj|BAG90684.1| unnamed
           protein product [Oryza sativa Japonica Group]
          Length = 320

 Score = 57.0 bits (136), Expect = 4e-06
 Identities = 49/181 (27%), Positives = 73/181 (40%), Gaps = 13/181 (7%)
 Frame = +2

Query: 44  PNQNLQMHYPPHTPIQQFHVNQ--SPNQSSQMYYPPGGSWRHPGQFGAXXXXXXXXXXXX 217
           P+Q+     P HTP +  H +   SP +S   +  P   +R P                 
Sbjct: 109 PHQHHMAPPPIHTPSRLSHDSPGGSPWRSPMQFQAPMSGYRGPPPGAPPPWSPHSGVPPP 168

Query: 218 XXXXXXXXXXXXFTSP-TWG----SSGRGRNPMGYSGRGRFHSIH-ESRHTNXXXXXXXX 379
                       +  P ++G    + G+G   M Y  RGR  S +   R  N        
Sbjct: 169 WNPHSAPPSQGLYPHPPSYGPRNYNPGQGGGRMNYGPRGRPDSPYGRGRGQNNYNNPGSR 228

Query: 380 XXXXXXXXXAQ-----RETEQLYNKSMLVDPWQNLKPVVGNILVPLAGPDFWLPKSLQAK 544
                     Q     ++    Y+KSM  DPW++L+P+VGNI++P  G   WLP+SL+AK
Sbjct: 229 GRGGRDGSGTQNYSGWQDGRVRYHKSMTDDPWRDLQPIVGNIMIPRDGSKSWLPESLRAK 288

Query: 545 K 547
           K
Sbjct: 289 K 289


>gb|EEE57061.1| hypothetical protein OsJ_06871 [Oryza sativa Japonica Group]
          Length = 356

 Score = 57.0 bits (136), Expect = 4e-06
 Identities = 49/181 (27%), Positives = 73/181 (40%), Gaps = 13/181 (7%)
 Frame = +2

Query: 44  PNQNLQMHYPPHTPIQQFHVNQ--SPNQSSQMYYPPGGSWRHPGQFGAXXXXXXXXXXXX 217
           P+Q+     P HTP +  H +   SP +S   +  P   +R P                 
Sbjct: 145 PHQHHMAPPPIHTPSRLSHDSPGGSPWRSPMQFQAPMSGYRGPPPGAPPPWSPHSGVPPP 204

Query: 218 XXXXXXXXXXXXFTSP-TWG----SSGRGRNPMGYSGRGRFHSIH-ESRHTNXXXXXXXX 379
                       +  P ++G    + G+G   M Y  RGR  S +   R  N        
Sbjct: 205 WNPHSAPPSQGLYPHPPSYGPRNYNPGQGGGRMNYGPRGRPDSPYGRGRGQNNYNNPGSR 264

Query: 380 XXXXXXXXXAQ-----RETEQLYNKSMLVDPWQNLKPVVGNILVPLAGPDFWLPKSLQAK 544
                     Q     ++    Y+KSM  DPW++L+P+VGNI++P  G   WLP+SL+AK
Sbjct: 265 GRGGRDGSGTQNYSGWQDGRVRYHKSMTDDPWRDLQPIVGNIMIPRDGSKSWLPESLRAK 324

Query: 545 K 547
           K
Sbjct: 325 K 325


>gb|EAY86004.1| hypothetical protein OsI_07365 [Oryza sativa Indica Group]
          Length = 320

 Score = 56.6 bits (135), Expect = 5e-06
 Identities = 23/39 (58%), Positives = 32/39 (82%)
 Frame = +2

Query: 431 YNKSMLVDPWQNLKPVVGNILVPLAGPDFWLPKSLQAKK 547
           Y+KSM  DPW++L+P+VGNI++P  G   WLP+SL+AKK
Sbjct: 251 YHKSMTDDPWRDLQPIVGNIMIPRDGSKSWLPESLRAKK 289


Top