BLASTX nr result

ID: Dioscorea21_contig00023027 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00023027
         (272 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EAZ03703.1| hypothetical protein OsI_25836 [Oryza sativa Indi...    66   3e-09
ref|NP_001059535.1| Os07g0446100 [Oryza sativa Japonica Group] g...    65   6e-09
gb|EAZ39648.1| hypothetical protein OsJ_24077 [Oryza sativa Japo...    65   6e-09
ref|XP_003563184.1| PREDICTED: probable E3 ubiquitin-protein lig...    62   6e-08
dbj|BAJ95071.1| predicted protein [Hordeum vulgare subsp. vulgare]     62   6e-08

>gb|EAZ03703.1| hypothetical protein OsI_25836 [Oryza sativa Indica Group]
          Length = 493

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 38/86 (44%), Positives = 53/86 (61%)
 Frame = -2

Query: 271 KFRLSSGVEGDRQQLLLFYNACRGIPRTSINVPAAPVISAAPMPTTAQINPQXXXXXXXX 92
           +++L    EGD+QQL  FY+AC GIP+ +  VPA P  +  P P++A   P         
Sbjct: 204 RYKLLPVCEGDKQQLQWFYSACCGIPQVASMVPAQPANAPLPNPSSASSLPS------VI 257

Query: 91  XXXSREDDEISMAIHASIQSAMAEGV 14
              S+ED E++M I+ASIQSA+AEGV
Sbjct: 258 STPSKEDAELAMVINASIQSAIAEGV 283


>ref|NP_001059535.1| Os07g0446100 [Oryza sativa Japonica Group]
           gi|75327171|sp|Q7XI08.1|XB34_ORYSJ RecName:
           Full=Probable E3 ubiquitin-protein ligase XBOS34;
           AltName: Full=Ankyrin repeat domain and RING
           finger-containing protein XBOS34; AltName: Full=XB3
           protein homolog 4 gi|33146928|dbj|BAC79949.1|
           auxin-regulated protein-like protein [Oryza sativa
           Japonica Group] gi|113611071|dbj|BAF21449.1|
           Os07g0446100 [Oryza sativa Japonica Group]
          Length = 513

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 38/86 (44%), Positives = 53/86 (61%)
 Frame = -2

Query: 271 KFRLSSGVEGDRQQLLLFYNACRGIPRTSINVPAAPVISAAPMPTTAQINPQXXXXXXXX 92
           +++L    EGD+QQL  FY+AC GIP+ +  VPA P  +  P P++A   P         
Sbjct: 224 RYKLLPVCEGDKQQLQWFYSACCGIPQVASMVPAQPANAPLPNPSSASSLPS------VI 277

Query: 91  XXXSREDDEISMAIHASIQSAMAEGV 14
              S+ED E++MAI+ASI SA+AEGV
Sbjct: 278 STPSKEDAELAMAINASILSAIAEGV 303


>gb|EAZ39648.1| hypothetical protein OsJ_24077 [Oryza sativa Japonica Group]
          Length = 493

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 38/86 (44%), Positives = 53/86 (61%)
 Frame = -2

Query: 271 KFRLSSGVEGDRQQLLLFYNACRGIPRTSINVPAAPVISAAPMPTTAQINPQXXXXXXXX 92
           +++L    EGD+QQL  FY+AC GIP+ +  VPA P  +  P P++A   P         
Sbjct: 204 RYKLLPVCEGDKQQLQWFYSACCGIPQVASMVPAQPANAPLPNPSSASSLPS------VI 257

Query: 91  XXXSREDDEISMAIHASIQSAMAEGV 14
              S+ED E++MAI+ASI SA+AEGV
Sbjct: 258 STPSKEDAELAMAINASILSAIAEGV 283


>ref|XP_003563184.1| PREDICTED: probable E3 ubiquitin-protein ligase XBOS34-like
           [Brachypodium distachyon]
          Length = 515

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 37/86 (43%), Positives = 53/86 (61%)
 Frame = -2

Query: 271 KFRLSSGVEGDRQQLLLFYNACRGIPRTSINVPAAPVISAAPMPTTAQINPQXXXXXXXX 92
           ++++ S  EGD+QQ+  FY+AC G+ +    VPA P  + AP+P    IN          
Sbjct: 224 RYKILSAFEGDKQQIRSFYSACCGMAQVVSMVPARP--ANAPVPNPLPINTS--STPSVL 279

Query: 91  XXXSREDDEISMAIHASIQSAMAEGV 14
              S+ED E++MAI+ASIQSA+AEGV
Sbjct: 280 STPSKEDVELAMAINASIQSAIAEGV 305


>dbj|BAJ95071.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 439

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 36/86 (41%), Positives = 50/86 (58%)
 Frame = -2

Query: 271 KFRLSSGVEGDRQQLLLFYNACRGIPRTSINVPAAPVISAAPMPTTAQINPQXXXXXXXX 92
           +++L    EGD+QQL  FY+AC G+ + +  VP  PV +  P P      P         
Sbjct: 139 RYKLLPAYEGDKQQLRSFYSACCGMAQVASMVPTRPVNAPNPNPA-----PNPSSAPSVE 193

Query: 91  XXXSREDDEISMAIHASIQSAMAEGV 14
              S+ED E++MAI+ASIQSA+AEGV
Sbjct: 194 STPSKEDVELAMAINASIQSAIAEGV 219


Top