BLASTX nr result

ID: Dioscorea21_contig00023025 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00023025
         (551 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003576338.1| PREDICTED: pentatricopeptide repeat-containi...   240   1e-61
gb|ACG25310.1| EMB2748 [Zea mays]                                     238   6e-61
gb|ACF87576.1| unknown [Zea mays] gi|413915962|gb|AFW55894.1| EM...   238   6e-61
ref|XP_002441762.1| hypothetical protein SORBIDRAFT_08g002000 [S...   236   1e-60
emb|CBI39461.3| unnamed protein product [Vitis vinifera]              235   4e-60

>ref|XP_003576338.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21190-like [Brachypodium distachyon]
          Length = 316

 Score =  240 bits (612), Expect = 1e-61
 Identities = 113/175 (64%), Positives = 139/175 (79%)
 Frame = -1

Query: 530 KNQLELKPMSSELDTEAVDQHSKGNAEPLPQQRIGRNVSSLDKRKFLVNTLLDLKDSKEA 351
           + + EL P ++  D +AV    + +   L +  +G  +SS +KRKFL+NTLLDL+DSKEA
Sbjct: 55  QTRTELNPSTAMKDNDAVIDRIQKSTRELKRGPVGHTLSSAEKRKFLINTLLDLEDSKEA 114

Query: 350 VYGTLDAWVAWEQEFPLAMLKRALLVLEKEEQWHRVVQVLKWMLSKGQGTTMGTYEQLIR 171
           VY TLDAWVA+EQEFPLA +K+A+  LEKEEQWHR+VQV+KWMLSKGQG T+ TYEQL+R
Sbjct: 115 VYSTLDAWVAFEQEFPLASIKQAIEALEKEEQWHRIVQVIKWMLSKGQGNTIRTYEQLVR 174

Query: 170 ALEKDGRPEEAHNIWVKKVSHDLHSVPWRVCDLMISIYYRNNMLERLVKLFKGLE 6
           ALEKD R EEAH IW KK+SHDLHSVPWR C LM++IYYRNN L+RL+KLF  LE
Sbjct: 175 ALEKDNRAEEAHRIWEKKISHDLHSVPWRFCGLMLAIYYRNNKLDRLIKLFHNLE 229


>gb|ACG25310.1| EMB2748 [Zea mays]
          Length = 322

 Score =  238 bits (606), Expect = 6e-61
 Identities = 116/173 (67%), Positives = 137/173 (79%)
 Frame = -1

Query: 524 QLELKPMSSELDTEAVDQHSKGNAEPLPQQRIGRNVSSLDKRKFLVNTLLDLKDSKEAVY 345
           Q EL+P +   DT+ +    + +   L +  +G+N+SS +KRKFLVNTLL L+DS+EAVY
Sbjct: 58  QNELEPTTPVKDTDIIIDRIRKSTRKLEEGPVGKNLSSAEKRKFLVNTLLSLEDSREAVY 117

Query: 344 GTLDAWVAWEQEFPLAMLKRALLVLEKEEQWHRVVQVLKWMLSKGQGTTMGTYEQLIRAL 165
           GTLDAWVA+EQ+FPLA LK+AL VLEKEEQWHR+VQV+KWMLSKGQG TM TYE L  AL
Sbjct: 118 GTLDAWVAFEQDFPLASLKQALSVLEKEEQWHRIVQVIKWMLSKGQGNTMRTYELLACAL 177

Query: 164 EKDGRPEEAHNIWVKKVSHDLHSVPWRVCDLMISIYYRNNMLERLVKLFKGLE 6
           EKD R EEAH IW  KV HDLHSVPWR C LM++IYYRNN L+RLVKLFK LE
Sbjct: 178 EKDNRAEEAHRIWQNKVGHDLHSVPWRFCRLMLAIYYRNNRLDRLVKLFKELE 230


>gb|ACF87576.1| unknown [Zea mays] gi|413915962|gb|AFW55894.1| EMB2748 [Zea mays]
          Length = 322

 Score =  238 bits (606), Expect = 6e-61
 Identities = 116/173 (67%), Positives = 137/173 (79%)
 Frame = -1

Query: 524 QLELKPMSSELDTEAVDQHSKGNAEPLPQQRIGRNVSSLDKRKFLVNTLLDLKDSKEAVY 345
           Q EL+P +   DT+ +    + +   L +  +G+N+SS +KRKFLVNTLL L+DS+EAVY
Sbjct: 58  QNELEPTTPVKDTDIIIDRIRKSTRKLEEGPVGKNLSSAEKRKFLVNTLLSLEDSREAVY 117

Query: 344 GTLDAWVAWEQEFPLAMLKRALLVLEKEEQWHRVVQVLKWMLSKGQGTTMGTYEQLIRAL 165
           GTLDAWVA+EQ+FPLA LK+AL VLEKEEQWHR+VQV+KWMLSKGQG TM TYE L  AL
Sbjct: 118 GTLDAWVAFEQDFPLASLKQALSVLEKEEQWHRIVQVIKWMLSKGQGNTMRTYELLACAL 177

Query: 164 EKDGRPEEAHNIWVKKVSHDLHSVPWRVCDLMISIYYRNNMLERLVKLFKGLE 6
           EKD R EEAH IW  KV HDLHSVPWR C LM++IYYRNN L+RLVKLFK LE
Sbjct: 178 EKDNRAEEAHRIWQNKVGHDLHSVPWRFCRLMLAIYYRNNRLDRLVKLFKELE 230


>ref|XP_002441762.1| hypothetical protein SORBIDRAFT_08g002000 [Sorghum bicolor]
           gi|241942455|gb|EES15600.1| hypothetical protein
           SORBIDRAFT_08g002000 [Sorghum bicolor]
          Length = 300

 Score =  236 bits (603), Expect = 1e-60
 Identities = 114/179 (63%), Positives = 141/179 (78%)
 Frame = -1

Query: 542 QNQMKNQLELKPMSSELDTEAVDQHSKGNAEPLPQQRIGRNVSSLDKRKFLVNTLLDLKD 363
           ++ +  Q EL+P +    T+ +    + +   L +  +G+N+SS +KRKFLVNTLL L+D
Sbjct: 59  RDSIYQQNELEPTTPVKGTDVIIDRIRKSTGKLEEGPVGKNLSSAEKRKFLVNTLLSLED 118

Query: 362 SKEAVYGTLDAWVAWEQEFPLAMLKRALLVLEKEEQWHRVVQVLKWMLSKGQGTTMGTYE 183
           S+EAVYGTLDAWVA+EQ+FPLA LK+AL VLEKEEQWHR+VQV+KWMLSKGQG TM TYE
Sbjct: 119 SREAVYGTLDAWVAFEQDFPLASLKQALSVLEKEEQWHRIVQVVKWMLSKGQGNTMRTYE 178

Query: 182 QLIRALEKDGRPEEAHNIWVKKVSHDLHSVPWRVCDLMISIYYRNNMLERLVKLFKGLE 6
            L+ ALEKD R EEAH IW KK+ HDLHSVPWR C LM++IYYRNN L+RL+KLFK LE
Sbjct: 179 LLVCALEKDNRAEEAHRIWQKKIGHDLHSVPWRFCRLMLAIYYRNNRLDRLMKLFKELE 237


>emb|CBI39461.3| unnamed protein product [Vitis vinifera]
          Length = 296

 Score =  235 bits (599), Expect = 4e-60
 Identities = 117/182 (64%), Positives = 136/182 (74%), Gaps = 3/182 (1%)
 Frame = -1

Query: 542 QNQMK---NQLELKPMSSELDTEAVDQHSKGNAEPLPQQRIGRNVSSLDKRKFLVNTLLD 372
           Q QM    N  E+  +  + + + +   S  +A  + + +IG NVS  DK  FLV TLLD
Sbjct: 34  QTQMSDTSNVGEVAFLGGQCNNQPMYHDSGKDAASVHKHQIGENVSRKDKINFLVTTLLD 93

Query: 371 LKDSKEAVYGTLDAWVAWEQEFPLAMLKRALLVLEKEEQWHRVVQVLKWMLSKGQGTTMG 192
           LKDSKEAVYG LDAWVAWEQ FP+A LKR L+ LEKE+QWHRV+QV+KWMLSKGQGTTMG
Sbjct: 94  LKDSKEAVYGALDAWVAWEQNFPIASLKRVLITLEKEQQWHRVIQVVKWMLSKGQGTTMG 153

Query: 191 TYEQLIRALEKDGRPEEAHNIWVKKVSHDLHSVPWRVCDLMISIYYRNNMLERLVKLFKG 12
           TY QLIRAL+ D R EEAH  WVKK+  DLHSVPW +C  MIS+YYRNNMLE LVKLFKG
Sbjct: 154 TYGQLIRALDMDHRAEEAHEFWVKKIGTDLHSVPWHLCHRMISVYYRNNMLENLVKLFKG 213

Query: 11  LE 6
           LE
Sbjct: 214 LE 215


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