BLASTX nr result

ID: Dioscorea21_contig00023016 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00023016
         (665 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002464996.1| hypothetical protein SORBIDRAFT_01g030130 [S...   182   4e-44
gb|AAK20059.1|AC025783_19 hypothetical protein [Oryza sativa Jap...   182   7e-44
ref|NP_001065210.2| Os10g0545600 [Oryza sativa Japonica Group] g...   182   7e-44
gb|EEE51342.1| hypothetical protein OsJ_32345 [Oryza sativa Japo...   182   7e-44
ref|XP_003572036.1| PREDICTED: E3 ubiquitin-protein ligase RFWD3...   180   2e-43

>ref|XP_002464996.1| hypothetical protein SORBIDRAFT_01g030130 [Sorghum bicolor]
           gi|241918850|gb|EER91994.1| hypothetical protein
           SORBIDRAFT_01g030130 [Sorghum bicolor]
          Length = 571

 Score =  182 bits (463), Expect = 4e-44
 Identities = 100/205 (48%), Positives = 133/205 (64%), Gaps = 1/205 (0%)
 Frame = +3

Query: 6   SLEGLSGHPIHTIHSIVHNDNTRKVVTASALGPCIWNVGGIGERPSLIPGLENQGICISL 185
           S  GLS HP+HTIH  V +  +R V++AS++GPCIW+      RPSL+ G+ENQG+CISL
Sbjct: 369 STMGLSTHPVHTIHCAVDDSGSRNVLSASSIGPCIWDASE--NRPSLVSGMENQGVCISL 426

Query: 186 ACSS-STDELVASYRPKVEVSNDTAXXXXXXXXXXXXXXXCGKVGTHVLIKRLNSTQYFR 362
           AC+S S+D LVASYRPKVE+ +D+A                GK+G H L++R  +T + +
Sbjct: 427 ACTSPSSDLLVASYRPKVELPDDSATQAATQQSPVLTGS--GKLGYHTLLRRTTTTSFAK 484

Query: 363 HRDGFGYVSDLRMQKSAILSTEGGNPLFAYADESTRGVCLSELPSFQVVNRLMPHPTHIL 542
                G VS+LRM KSAI+   G   LFAY DES  GV   +LPSFQ    LMPH   +L
Sbjct: 485 DHICSGVVSELRMSKSAIIPCGGNQHLFAYGDESLYGVRTWQLPSFQRYTDLMPHRQPVL 544

Query: 543 DLRYAKASGPGFLGTISEDKLQLFT 617
           DLR+A++S   +LG +S +KLQ+FT
Sbjct: 545 DLRFAESSTGRYLGCLSAEKLQVFT 569


>gb|AAK20059.1|AC025783_19 hypothetical protein [Oryza sativa Japonica Group]
           gi|31433364|gb|AAP54883.1| Zinc finger, C3HC4 type
           family protein, expressed [Oryza sativa Japonica Group]
          Length = 499

 Score =  182 bits (461), Expect = 7e-44
 Identities = 103/209 (49%), Positives = 135/209 (64%), Gaps = 6/209 (2%)
 Frame = +3

Query: 6   SLEGLSGHPIHTIHSIVHNDNTRKVVTASALGPCIWNVGGIGERPSLIPGLENQGICISL 185
           S+ GLS HP+HTIHS+V    +RKV++AS++GPCIW+V G   RP L+ G+EN G+CISL
Sbjct: 290 SMMGLSTHPVHTIHSVVDGGGSRKVISASSIGPCIWDVDGSRNRPDLLNGMENHGVCISL 349

Query: 186 ACS-SSTDELVASYRPKVEVSNDTAXXXXXXXXXXXXXXXCGKVGTHVLIKRLNSTQYFR 362
           AC+  S+D LVAS+RPKVE+S+D                  GK+G H LI+R ++T + R
Sbjct: 350 ACNPPSSDLLVASFRPKVELSDD--GTSQAGKSQSPTPSASGKLGCHALIRRTSNTSFAR 407

Query: 363 HRDGFGYVSDLRMQKSAILSTEGGN---PLFAYADESTRGVCLSELPSFQVVNRLMPHPT 533
            +   G VS LRM KSAI+   G +    LFAY DES RGV    LPS Q    L PH  
Sbjct: 408 DQICRGNVSGLRMSKSAIIPFTGRSNQQHLFAYGDESLRGVRTWRLPSLQTFADLRPHRQ 467

Query: 534 HILDLRYAKASGPG--FLGTISEDKLQLF 614
            ILDLR+A++S  G  +LG +SED+LQ+F
Sbjct: 468 PILDLRFAESSSTGERYLGCLSEDRLQVF 496


>ref|NP_001065210.2| Os10g0545600 [Oryza sativa Japonica Group]
           gi|255679598|dbj|BAF27124.2| Os10g0545600 [Oryza sativa
           Japonica Group]
          Length = 475

 Score =  182 bits (461), Expect = 7e-44
 Identities = 103/209 (49%), Positives = 135/209 (64%), Gaps = 6/209 (2%)
 Frame = +3

Query: 6   SLEGLSGHPIHTIHSIVHNDNTRKVVTASALGPCIWNVGGIGERPSLIPGLENQGICISL 185
           S+ GLS HP+HTIHS+V    +RKV++AS++GPCIW+V G   RP L+ G+EN G+CISL
Sbjct: 266 SMMGLSTHPVHTIHSVVDGGGSRKVISASSIGPCIWDVDGSRNRPDLLNGMENHGVCISL 325

Query: 186 ACS-SSTDELVASYRPKVEVSNDTAXXXXXXXXXXXXXXXCGKVGTHVLIKRLNSTQYFR 362
           AC+  S+D LVAS+RPKVE+S+D                  GK+G H LI+R ++T + R
Sbjct: 326 ACNPPSSDLLVASFRPKVELSDD--GTSQAGKSQSPTPSASGKLGCHALIRRTSNTSFAR 383

Query: 363 HRDGFGYVSDLRMQKSAILSTEGGN---PLFAYADESTRGVCLSELPSFQVVNRLMPHPT 533
            +   G VS LRM KSAI+   G +    LFAY DES RGV    LPS Q    L PH  
Sbjct: 384 DQICRGNVSGLRMSKSAIIPFTGRSNQQHLFAYGDESLRGVRTWRLPSLQTFADLRPHRQ 443

Query: 534 HILDLRYAKASGPG--FLGTISEDKLQLF 614
            ILDLR+A++S  G  +LG +SED+LQ+F
Sbjct: 444 PILDLRFAESSSTGERYLGCLSEDRLQVF 472


>gb|EEE51342.1| hypothetical protein OsJ_32345 [Oryza sativa Japonica Group]
          Length = 453

 Score =  182 bits (461), Expect = 7e-44
 Identities = 103/209 (49%), Positives = 135/209 (64%), Gaps = 6/209 (2%)
 Frame = +3

Query: 6   SLEGLSGHPIHTIHSIVHNDNTRKVVTASALGPCIWNVGGIGERPSLIPGLENQGICISL 185
           S+ GLS HP+HTIHS+V    +RKV++AS++GPCIW+V G   RP L+ G+EN G+CISL
Sbjct: 244 SMMGLSTHPVHTIHSVVDGGGSRKVISASSIGPCIWDVDGSRNRPDLLNGMENHGVCISL 303

Query: 186 ACS-SSTDELVASYRPKVEVSNDTAXXXXXXXXXXXXXXXCGKVGTHVLIKRLNSTQYFR 362
           AC+  S+D LVAS+RPKVE+S+D                  GK+G H LI+R ++T + R
Sbjct: 304 ACNPPSSDLLVASFRPKVELSDD--GTSQAGKSQSPTPSASGKLGCHALIRRTSNTSFAR 361

Query: 363 HRDGFGYVSDLRMQKSAILSTEGGN---PLFAYADESTRGVCLSELPSFQVVNRLMPHPT 533
            +   G VS LRM KSAI+   G +    LFAY DES RGV    LPS Q    L PH  
Sbjct: 362 DQICRGNVSGLRMSKSAIIPFTGRSNQQHLFAYGDESLRGVRTWRLPSLQTFADLRPHRQ 421

Query: 534 HILDLRYAKASGPG--FLGTISEDKLQLF 614
            ILDLR+A++S  G  +LG +SED+LQ+F
Sbjct: 422 PILDLRFAESSSTGERYLGCLSEDRLQVF 450


>ref|XP_003572036.1| PREDICTED: E3 ubiquitin-protein ligase RFWD3-like [Brachypodium
           distachyon]
          Length = 560

 Score =  180 bits (457), Expect = 2e-43
 Identities = 98/206 (47%), Positives = 134/206 (65%), Gaps = 3/206 (1%)
 Frame = +3

Query: 6   SLEGLSGHPIHTIHSIVHNDNTRKVVTASALGPCIWNVGGIGERPSLIPGLENQGICISL 185
           SL GLS HP+HT+HS+V +  +RKV++AS++GPCIW+VGG   +P+L+ G+E  G+CISL
Sbjct: 353 SLTGLSTHPVHTVHSVVDDSGSRKVISASSIGPCIWDVGGSENKPNLVTGMEIHGVCISL 412

Query: 186 ACSS-STDELVASYRPKVEVSNDTAXXXXXXXXXXXXXXXCGKVGTHVLIKRLNSTQYFR 362
           AC++ S+D LVAS+RPKVE+                     GK+G H  I+R +ST + +
Sbjct: 413 ACTAPSSDLLVASFRPKVELLG-VGAASQTAISQSPTLSGSGKLGCHAFIRRTSSTSFVK 471

Query: 363 HRDGFGYVSDLRMQKSAILSTEGGNP-LFAYADESTRGVCLSELPSFQVVNRLMPHPTHI 539
                G VS+LRM KS I+   G N  LFAY DE+  GV    LPSFQ    L+PH   I
Sbjct: 472 DGICNGNVSELRMSKSVIIPCSGSNQHLFAYGDETLSGVRTWRLPSFQTFTDLIPHRRPI 531

Query: 540 LDLRYAKAS-GPGFLGTISEDKLQLF 614
           LDLR+A++S G  +LG +SE+KLQ+F
Sbjct: 532 LDLRFAESSTGDRYLGCLSEEKLQVF 557


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