BLASTX nr result

ID: Dioscorea21_contig00022941 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00022941
         (434 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_177172.6| zinc ion binding protein [Arabidopsis thaliana]...   159   3e-37
emb|CBI32077.3| unnamed protein product [Vitis vinifera]              157   6e-37
ref|XP_002267535.1| PREDICTED: zinc finger MYND domain-containin...   156   2e-36
ref|XP_002887282.1| predicted protein [Arabidopsis lyrata subsp....   155   2e-36
ref|XP_002311856.1| predicted protein [Populus trichocarpa] gi|2...   155   2e-36

>ref|NP_177172.6| zinc ion binding protein [Arabidopsis thaliana]
           gi|332196904|gb|AEE35025.1| zinc ion binding protein
           [Arabidopsis thaliana]
          Length = 374

 Score =  159 bits (401), Expect = 3e-37
 Identities = 81/134 (60%), Positives = 92/134 (68%), Gaps = 5/134 (3%)
 Frame = +2

Query: 38  MECAARGSSTPCSPGPATRRCGNCGAVAYCSLSHQMSHWNDHKDECPRLEQQMRRVDALN 217
           MECAARG +T C  GP TRRCG CGAVAYCS+SHQ+SHW+ HK+EC RLE+QMRRVD LN
Sbjct: 1   MECAARGFATRCV-GPPTRRCGQCGAVAYCSVSHQISHWSYHKEECERLEEQMRRVDLLN 59

Query: 218 DFPFSFTVASTI----LEDTRCSFLDSIGLHRNGIWSSECCCGMQSDDS-RIGGKYGDWS 382
           DFPF+FT  +TI      +TRCSF    GLHR G+W  EC CG  + DS  I G    W 
Sbjct: 60  DFPFTFTEEATIQVSQKHETRCSFFIKRGLHRVGMWMYECNCGALAFDSFNIEG----WH 115

Query: 383 LPSILCPCTEPRGP 424
           LPS  CPC  P  P
Sbjct: 116 LPSSSCPCRGPLSP 129


>emb|CBI32077.3| unnamed protein product [Vitis vinifera]
          Length = 376

 Score =  157 bits (398), Expect = 6e-37
 Identities = 77/133 (57%), Positives = 95/133 (71%), Gaps = 7/133 (5%)
 Frame = +2

Query: 38  MECAARGSSTPCSPGPATRRCGNCGAVAYCSLSHQMSHWNDHKDECPRLEQQMRRVDALN 217
           MECA RG+   C  GPATRRCG CGAVAYCS+SHQ+SHW+DHK+EC RLEQQM+ VD LN
Sbjct: 1   MECAGRGTGRRCI-GPATRRCGRCGAVAYCSVSHQVSHWSDHKEECGRLEQQMKLVDVLN 59

Query: 218 DFPFSFTVASTI----LEDTRCSFLDSIGLHRNGIWSSECCCG---MQSDDSRIGGKYGD 376
           DFPF+FT  +TI     +++RCSFL + GLHR G+W  EC CG   +  + SR+      
Sbjct: 60  DFPFTFTPEATIRIVEKQESRCSFLSNRGLHRVGMWMCECPCGDSLVSLEHSRLS---DC 116

Query: 377 WSLPSILCPCTEP 415
           W+L S LCPC+ P
Sbjct: 117 WNLSSTLCPCSGP 129


>ref|XP_002267535.1| PREDICTED: zinc finger MYND domain-containing protein 15-like
           [Vitis vinifera]
          Length = 369

 Score =  156 bits (394), Expect = 2e-36
 Identities = 77/130 (59%), Positives = 92/130 (70%), Gaps = 4/130 (3%)
 Frame = +2

Query: 38  MECAARGSSTPCSPGPATRRCGNCGAVAYCSLSHQMSHWNDHKDECPRLEQQMRRVDALN 217
           MECA RG+   C  GPATRRCG CGAVAYCS+SHQ+SHW+DHK+EC RLEQQM+ VD LN
Sbjct: 1   MECAGRGTGRRCI-GPATRRCGRCGAVAYCSVSHQVSHWSDHKEECGRLEQQMKLVDVLN 59

Query: 218 DFPFSFTVASTI----LEDTRCSFLDSIGLHRNGIWSSECCCGMQSDDSRIGGKYGDWSL 385
           DFPF+FT  +TI     +++RCSFL + GLHR G+W  EC CG   D   I      W+L
Sbjct: 60  DFPFTFTPEATIRIVEKQESRCSFLSNRGLHRVGMWMCECPCG---DSLNI----DCWNL 112

Query: 386 PSILCPCTEP 415
            S LCPC+ P
Sbjct: 113 SSTLCPCSGP 122


>ref|XP_002887282.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297333123|gb|EFH63541.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 392

 Score =  155 bits (393), Expect = 2e-36
 Identities = 78/136 (57%), Positives = 90/136 (66%), Gaps = 5/136 (3%)
 Frame = +2

Query: 38  MECAARGSSTPCSPGPATRRCGNCGAVAYCSLSHQMSHWNDHKDECPRLEQQMRRVDALN 217
           MECAARG +T C  GP TRRCG CG+VAYCS+SHQ SHW+ HK+EC RLE+QMRRVD LN
Sbjct: 1   MECAARGFATRCV-GPPTRRCGQCGSVAYCSVSHQSSHWSYHKEECERLEEQMRRVDLLN 59

Query: 218 DFPFSFTVASTI----LEDTRCSFLDSIGLHRNGIWSSECCCGMQSDDSRIGGKYGD-WS 382
           DFPF+FT  +TI      +TRCSFL    LHR G+W  EC CG  +  S       D W 
Sbjct: 60  DFPFTFTEEATIQVSQKHETRCSFLCKRELHRVGMWMYECNCGASARFSAFDSFNNDGWH 119

Query: 383 LPSILCPCTEPRGPTS 430
           LPS  CPC  P  P +
Sbjct: 120 LPSSSCPCRGPLSPVT 135


>ref|XP_002311856.1| predicted protein [Populus trichocarpa] gi|222851676|gb|EEE89223.1|
           predicted protein [Populus trichocarpa]
          Length = 391

 Score =  155 bits (393), Expect = 2e-36
 Identities = 80/146 (54%), Positives = 94/146 (64%), Gaps = 15/146 (10%)
 Frame = +2

Query: 38  MECAARGSSTPCSPGPATRRCGNCGAVAYCSLSHQMSHWNDHKDECPRLEQQMRRVDALN 217
           MECA +G  T C  G A RRCG CGAVAYCS+SHQMSHWN+HK+EC RLEQQM+RVD LN
Sbjct: 1   MECAGKGRGTRCM-GSARRRCGRCGAVAYCSVSHQMSHWNEHKEECERLEQQMKRVDVLN 59

Query: 218 DFPFSF----TVASTILE--DTRCSFLDSIGLHRNGIWSSECCC--------GMQSDDS- 352
           DFPF+F    T  S + E   +RCSFL   G+H+ G+W  ECCC         + S DS 
Sbjct: 60  DFPFTFSQEATATSQVCEKPGSRCSFLSKRGIHQLGMWMHECCCFDSEEATSSLASFDSL 119

Query: 353 RIGGKYGDWSLPSILCPCTEPRGPTS 430
           R+  K G W+L   LCPC  P  P S
Sbjct: 120 RLLSKDGGWNLLGDLCPCHGPISPIS 145


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