BLASTX nr result

ID: Dioscorea21_contig00022212 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00022212
         (208 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279290.1| PREDICTED: tetratricopeptide repeat protein ...    61   8e-08
emb|CAN74233.1| hypothetical protein VITISV_040224 [Vitis vinifera]    61   8e-08
ref|XP_003550986.1| PREDICTED: tetratricopeptide repeat protein ...    61   1e-07
ref|XP_002303385.1| predicted protein [Populus trichocarpa] gi|2...    60   1e-07
emb|CBI33730.3| unnamed protein product [Vitis vinifera]               59   3e-07

>ref|XP_002279290.1| PREDICTED: tetratricopeptide repeat protein 13-like [Vitis
           vinifera]
          Length = 1068

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 31/64 (48%), Positives = 44/64 (68%)
 Frame = -3

Query: 206 SALGRKEEALLVWQQGYENAVQQSADLKQXXXXXXXLSNAKQSQPVTCEEQVADSPIADS 27
           SALG+KE+ALLVW+QGY +AV+QSADLKQ           KQ++ +TCE    +SP +  
Sbjct: 82  SALGKKEDALLVWEQGYGHAVRQSADLKQFLELEEL---LKQNRRITCENHAMESPESSI 138

Query: 26  SITK 15
           S+++
Sbjct: 139 SVSE 142


>emb|CAN74233.1| hypothetical protein VITISV_040224 [Vitis vinifera]
          Length = 527

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 31/64 (48%), Positives = 44/64 (68%)
 Frame = -3

Query: 206 SALGRKEEALLVWQQGYENAVQQSADLKQXXXXXXXLSNAKQSQPVTCEEQVADSPIADS 27
           SALG+KE+ALLVW+QGY +AV+QSADLKQ           KQ++ +TCE    +SP +  
Sbjct: 23  SALGKKEDALLVWEQGYGHAVRQSADLKQFLELEEL---LKQNRRITCENHAMESPESSI 79

Query: 26  SITK 15
           S+++
Sbjct: 80  SVSE 83


>ref|XP_003550986.1| PREDICTED: tetratricopeptide repeat protein 13-like [Glycine max]
          Length = 1042

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 32/68 (47%), Positives = 40/68 (58%)
 Frame = -3

Query: 206 SALGRKEEALLVWQQGYENAVQQSADLKQXXXXXXXLSNAKQSQPVTCEEQVADSPIADS 27
           S LGRKE ALLVW+QGYE+A+ QSADLKQ       ++ AKQ     CE +   S     
Sbjct: 82  SVLGRKENALLVWEQGYEHALHQSADLKQLLELEELIATAKQGNNTLCESETHRSLPQTK 141

Query: 26  SITKENQS 3
           S++  N S
Sbjct: 142 SVSLSNGS 149


>ref|XP_002303385.1| predicted protein [Populus trichocarpa] gi|222840817|gb|EEE78364.1|
           predicted protein [Populus trichocarpa]
          Length = 526

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 30/58 (51%), Positives = 40/58 (68%)
 Frame = -3

Query: 206 SALGRKEEALLVWQQGYENAVQQSADLKQXXXXXXXLSNAKQSQPVTCEEQVADSPIA 33
           S+LGRK++ALLVW+QGYE+A+ QSADLKQ       L  AKQ +   CE  V +S ++
Sbjct: 82  SSLGRKDDALLVWEQGYEHALHQSADLKQLLELEELLKFAKQDRSAGCETHVVESRLS 139


>emb|CBI33730.3| unnamed protein product [Vitis vinifera]
          Length = 981

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 30/56 (53%), Positives = 39/56 (69%)
 Frame = -3

Query: 206 SALGRKEEALLVWQQGYENAVQQSADLKQXXXXXXXLSNAKQSQPVTCEEQVADSP 39
           SALG+KE+ALLVW+QGY +AV+QSADLKQ           KQ++ +TCE    +SP
Sbjct: 82  SALGKKEDALLVWEQGYGHAVRQSADLKQFLELEEL---LKQNRRITCENHAMESP 134


Top