BLASTX nr result

ID: Dioscorea21_contig00021746 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00021746
         (1029 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267175.1| PREDICTED: uncharacterized protein LOC100256...   213   5e-53
ref|XP_002524601.1| hypothetical protein RCOM_1213430 [Ricinus c...   189   9e-46
dbj|BAD33523.1| putative endoribonuclease E [Oryza sativa Japoni...   183   7e-44
ref|NP_001061542.1| Os08g0323600 [Oryza sativa Japonica Group] g...   183   7e-44
ref|XP_002883633.1| glycoside hydrolase starch-binding domain-co...   181   3e-43

>ref|XP_002267175.1| PREDICTED: uncharacterized protein LOC100256290 [Vitis vinifera]
          Length = 1019

 Score =  213 bits (543), Expect = 5e-53
 Identities = 144/342 (42%), Positives = 197/342 (57%), Gaps = 18/342 (5%)
 Frame = +2

Query: 56   LSDVAVDDCMLKVRNATINASS----SENELSEREQPVEEPWLLQAILLSKKDPGESQES 223
            L D++V+D        TI+A S    S   +S R+QPVEEPWLLQ+ L++ K+   S  S
Sbjct: 240  LDDLSVEDKSFSDNEDTISAMSKGLDSNGTVSMRDQPVEEPWLLQSSLIASKEEMVSNMS 299

Query: 224  --LDSDQGKIEYPKKL---YQDTETSVLKDEGKTAGAVESASTVILINSSVCTMQRIAXX 388
              +D+ Q ++ + K L   Y  TE  + ++        +S STVILINSS+CTMQRIA  
Sbjct: 300  KNIDAAQVEVSHLKLLDQSYLHTEKLLPEEGTNLISKDDSVSTVILINSSICTMQRIAVL 359

Query: 389  XXXXXXXXXXXXXKNNVQCDSVYLGVVTQFVPHMGGAFVDIGISRPSLMDIKPSREPFVC 568
                         K+NVQCDSVYLGVVT+ VPHMGGAFV+IG SRPSLMDIK SREPF+ 
Sbjct: 360  EDGSLVELLLEPVKSNVQCDSVYLGVVTKLVPHMGGAFVNIGSSRPSLMDIKRSREPFIF 419

Query: 569  PPF----DGKIIGEAPNSSLNVNP-KDQVEAAEHDYNEDGMIDDEFLEDDPVQSVHEDFE 733
            PPF      K  G   N +L  NP   + E   +D   D + + +F +DDPVQ  H+DFE
Sbjct: 420  PPFHHGTKEKDNGSVFN-TLRENPIAHENEHTSYDVEADDLREVDF-QDDPVQFAHDDFE 477

Query: 734  --EADEDLKIPDALEISKNSDGVIHSSDG-ESDFEEYELETNHQVEDETTEDLLPSEMDH 904
              E ++D  +     I K+ +G I    G E DF++Y     + ++ ET  + LP E++ 
Sbjct: 478  EHEVEDDFDV----LIKKDLNGSIVDHGGVEVDFDDYSDGIENHIDSETINNFLPVELEK 533

Query: 905  SI-DSDLSNLIQQGLESTTATHVEENKWARVGKGAKVIVQVV 1027
               DS L  L++  ++ +   +  ENKWA+V KG K+IVQVV
Sbjct: 534  GFHDSQLPPLLE--MKDSRQAYTVENKWAQVQKGTKIIVQVV 573


>ref|XP_002524601.1| hypothetical protein RCOM_1213430 [Ricinus communis]
            gi|223536154|gb|EEF37809.1| hypothetical protein
            RCOM_1213430 [Ricinus communis]
          Length = 963

 Score =  189 bits (480), Expect = 9e-46
 Identities = 138/351 (39%), Positives = 189/351 (53%), Gaps = 27/351 (7%)
 Frame = +2

Query: 56   LSDVAVDDCMLKVRNATINASSSENE---LSEREQPVEEPWLLQA--ILLSKKDP----- 205
            L+DV  ++  L   N   N+   +++   LSER+QPVEEPWLLQ+  I +  KD      
Sbjct: 172  LNDVTFEN-KLYFNNKHTNSVGQDDQNLVLSERDQPVEEPWLLQSSIIFVISKDKIMPNI 230

Query: 206  -------GESQESLDSDQGKIEYPKKLYQ-DTETSVLKDEGKTAGAVESASTVILINSSV 361
                       ++ D++   ++   KL   D    +LKD+        S ST+ILINSS+
Sbjct: 231  SKNNNIAANDSKAWDANSQHLQVKDKLSPADGSNFILKDD--------SISTIILINSSI 282

Query: 362  CTMQRIAXXXXXXXXXXXXXXXKNNVQCDSVYLGVVTQFVPHMGGAFVDIGISRPSLMDI 541
            CTMQRIA               K NVQCDSVYLGVVT+FVPHMGGAFV+IG SRPSLMDI
Sbjct: 283  CTMQRIAVLEEGKLVELLLEPVKTNVQCDSVYLGVVTKFVPHMGGAFVNIGHSRPSLMDI 342

Query: 542  KPSREPFVCPPFDGKIIGEAPNSSLNVNPKDQVEAA---EHDYNEDGMIDD--EFL-EDD 703
            K SREPF+ PPF  K   E  N S  ++  ++ +AA   EH   +   IDD  EF+ ++D
Sbjct: 343  KQSREPFIFPPFRQKTKKEKMNDS-GLDSLEEHQAADGNEHTSQDIEGIDDVAEFISQED 401

Query: 704  PVQSVHEDFE--EADEDLKIPDALEISKNSDG-VIHSSDGESDFEEYELETNHQVEDETT 874
             V   H D +  EADED    D  E+ +N +G ++     +  FE +     H +E E  
Sbjct: 402  LVSLPHNDHDEHEADEDF---DISEVKENVNGSIVDYGQADPRFEHFLGGRQHHLEGEIM 458

Query: 875  EDLLPSEMDHSIDSDLSNLIQQGLESTTATHVEENKWARVGKGAKVIVQVV 1027
              ++PSE + S  S +S    Q  + +      +NKW +V KG K++VQVV
Sbjct: 459  NRVVPSETEGSNGSKMSQ--PQYRKDSEHLLANDNKWTQVRKGTKIVVQVV 507


>dbj|BAD33523.1| putative endoribonuclease E [Oryza sativa Japonica Group]
          Length = 898

 Score =  183 bits (464), Expect = 7e-44
 Identities = 126/328 (38%), Positives = 178/328 (54%), Gaps = 15/328 (4%)
 Frame = +2

Query: 89   KVRNATINASSSENELSEREQPVEEPWLLQAILLSKKDPGESQESLDSDQGKIEYPKKLY 268
            K  N   N S     + E++QPVEEPWL Q+ +++KK   +++  +++   K    K   
Sbjct: 336  KFVNKKQNLSEVSENIPEQDQPVEEPWLFQSKVVAKKPVVQTKGKIEA---KDIIRKLRK 392

Query: 269  QDTETSVLKDEGKTAGAVESASTVILINSSVCTMQRIAXXXXXXXXXXXXXXXKNNVQCD 448
             D   + L+++  T+G  E +S VI+INSSVCTMQRIA               KNNVQCD
Sbjct: 393  MDKPPAPLEEDKATSG--EPSSRVIVINSSVCTMQRIAVLEDGKLVELLLEPIKNNVQCD 450

Query: 449  SVYLGVVTQFVPHMGGAFVDIGISRPSLMDIKPSREPFVCPPFDGKIIGEAPNSSLNVNP 628
            S+YLG+VT+ VPHMGGAFVDIG+SRPSLM IK +R+PFV P    +I+  A   S N + 
Sbjct: 451  SIYLGIVTKLVPHMGGAFVDIGLSRPSLMSIKQNRDPFVYP----QIVKNAKRDSANFS- 505

Query: 629  KDQVEAAEHDYNEDGMIDDEFLEDDPVQSVHEDFEEADEDLKIPDALEISKNSD------ 790
                     DYN+D +   E  +DD       D E  DE    P A  +S+N +      
Sbjct: 506  ---------DYNDDSLPTYEDEDDDMTDGELADEENDDESSAFP-AEVVSENEEHMAFLP 555

Query: 791  ----GVIHSSDGESDF---EEYELETNHQVEDETTEDLLPSEMDHSIDSDLSNL--IQQG 943
                 +IHS++ ES     EE + E +  +EDE  EDLLP +    + +DL  L  IQ  
Sbjct: 556  NSKINMIHSAEFESISSYDEEKDDEIDDHMEDEYNEDLLPGDQS-EVSNDLKTLSSIQHA 614

Query: 944  LESTTATHVEENKWARVGKGAKVIVQVV 1027
            L   ++     ++W++V KG K++VQVV
Sbjct: 615  LRE-SSDDTNGSRWSQVRKGTKIMVQVV 641


>ref|NP_001061542.1| Os08g0323600 [Oryza sativa Japonica Group]
            gi|38637407|dbj|BAD03665.1| putative endoribonuclease E
            [Oryza sativa Japonica Group]
            gi|113623511|dbj|BAF23456.1| Os08g0323600 [Oryza sativa
            Japonica Group] gi|222640346|gb|EEE68478.1| hypothetical
            protein OsJ_26881 [Oryza sativa Japonica Group]
          Length = 1085

 Score =  183 bits (464), Expect = 7e-44
 Identities = 126/328 (38%), Positives = 178/328 (54%), Gaps = 15/328 (4%)
 Frame = +2

Query: 89   KVRNATINASSSENELSEREQPVEEPWLLQAILLSKKDPGESQESLDSDQGKIEYPKKLY 268
            K  N   N S     + E++QPVEEPWL Q+ +++KK   +++  +++   K    K   
Sbjct: 336  KFVNKKQNLSEVSENIPEQDQPVEEPWLFQSKVVAKKPVVQTKGKIEA---KDIIRKLRK 392

Query: 269  QDTETSVLKDEGKTAGAVESASTVILINSSVCTMQRIAXXXXXXXXXXXXXXXKNNVQCD 448
             D   + L+++  T+G  E +S VI+INSSVCTMQRIA               KNNVQCD
Sbjct: 393  MDKPPAPLEEDKATSG--EPSSRVIVINSSVCTMQRIAVLEDGKLVELLLEPIKNNVQCD 450

Query: 449  SVYLGVVTQFVPHMGGAFVDIGISRPSLMDIKPSREPFVCPPFDGKIIGEAPNSSLNVNP 628
            S+YLG+VT+ VPHMGGAFVDIG+SRPSLM IK +R+PFV P    +I+  A   S N + 
Sbjct: 451  SIYLGIVTKLVPHMGGAFVDIGLSRPSLMSIKQNRDPFVYP----QIVKNAKRDSANFS- 505

Query: 629  KDQVEAAEHDYNEDGMIDDEFLEDDPVQSVHEDFEEADEDLKIPDALEISKNSD------ 790
                     DYN+D +   E  +DD       D E  DE    P A  +S+N +      
Sbjct: 506  ---------DYNDDSLPTYEDEDDDMTDGELADEENDDESSAFP-AEVVSENEEHMAFLP 555

Query: 791  ----GVIHSSDGESDF---EEYELETNHQVEDETTEDLLPSEMDHSIDSDLSNL--IQQG 943
                 +IHS++ ES     EE + E +  +EDE  EDLLP +    + +DL  L  IQ  
Sbjct: 556  NSKINMIHSAEFESISSYDEEKDDEIDDHMEDEYNEDLLPGDQS-EVSNDLKTLSSIQHA 614

Query: 944  LESTTATHVEENKWARVGKGAKVIVQVV 1027
            L   ++     ++W++V KG K++VQVV
Sbjct: 615  LRE-SSDDTNGSRWSQVRKGTKIMVQVV 641


>ref|XP_002883633.1| glycoside hydrolase starch-binding domain-containing protein
            [Arabidopsis lyrata subsp. lyrata]
            gi|297329473|gb|EFH59892.1| glycoside hydrolase
            starch-binding domain-containing protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 991

 Score =  181 bits (458), Expect = 3e-43
 Identities = 135/366 (36%), Positives = 193/366 (52%), Gaps = 32/366 (8%)
 Frame = +2

Query: 26   PNGVPSGRKQLSDVAVDDCMLKVRNATIN---------------ASSSENE-----LSER 145
            PN V S + +  +++  D  ++V    +N               A SSEN       S+ 
Sbjct: 200  PNSVTSAQSE-GNISTSDSAIEVPRTLLNDKQVGDESFFCDELAAFSSENSNLSALFSDN 258

Query: 146  EQPVEEPWLLQ-AILLS-----KKDPGESQESLDSDQGKIEYPKKLYQDTETSVLKDEGK 307
             QP+EEPWL+Q +I L      + D  +  ES D ++  +   ++ +Q TET +L D G 
Sbjct: 259  YQPIEEPWLIQDSITLQHARNMQTDSEQDVESCDENENSLLTVEQNHQLTET-LLPDGGF 317

Query: 308  TAGAVESASTVILINSSVCTMQRIAXXXXXXXXXXXXXXXKNNVQCDSVYLGVVTQFVPH 487
                 ES ST ILINSS+CT+QRIA               K NVQCDSVYLGV+T+FVPH
Sbjct: 318  FQP--ESISTTILINSSICTVQRIAVLEGEKLVELLLEPVKTNVQCDSVYLGVITKFVPH 375

Query: 488  MGGAFVDIGISRPSLMDIKPSREPFVCPPF-DG---KIIGEAPNSSLNVNP-KDQVEAAE 652
            MGGAFV+IG +R S MDIK +REPF+ PPF DG   +    +P  S+N  P   ++E A 
Sbjct: 376  MGGAFVNIGSARHSFMDIKSNREPFIFPPFCDGSKKQAADGSPILSINDIPAPHEIEHAS 435

Query: 653  HDYNEDGMIDDEFLEDDPVQSVHEDFEEADED-LKIPDALEISKNSDGVIHSSDGESDFE 829
            +D+    ++D +   +DP +S H+D +E + D   + DAL    N   V H +       
Sbjct: 436  YDFEASSLLDID--SNDPGESFHDDDDEHENDEYHVSDALVGLVNGTVVNHGA------- 486

Query: 830  EYELETNHQVEDETTEDLLPSEMDHSIDSDLSNLIQQGLESTTATHVEENKWARVGKGAK 1009
                     VE  +   L+P E +HS+DS +SN      +++ A   ++NKW +V KG K
Sbjct: 487  ---------VEVGSENGLIPLEREHSVDSLVSN--PSVSKTSKAMPSKDNKWIQVRKGTK 535

Query: 1010 VIVQVV 1027
            +IVQVV
Sbjct: 536  IIVQVV 541


Top