BLASTX nr result

ID: Dioscorea21_contig00021681 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00021681
         (364 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267044.1| PREDICTED: 60S ribosomal protein L6, mitocho...   182   2e-44
emb|CAN72978.1| hypothetical protein VITISV_009029 [Vitis vinifera]   182   3e-44
ref|XP_002527470.1| 50S ribosomal protein L6, putative [Ricinus ...   176   1e-42
ref|XP_002310235.1| predicted protein [Populus trichocarpa] gi|1...   174   5e-42
ref|XP_003536284.1| PREDICTED: 60S ribosomal protein L6, mitocho...   174   7e-42

>ref|XP_002267044.1| PREDICTED: 60S ribosomal protein L6, mitochondrial [Vitis vinifera]
           gi|297735153|emb|CBI17515.3| unnamed protein product
           [Vitis vinifera]
          Length = 102

 Score =  182 bits (462), Expect = 2e-44
 Identities = 85/93 (91%), Positives = 90/93 (96%)
 Frame = -2

Query: 345 MEAKFFRFLKIVGVGFKARAETEGRQLFLKLGYSHEVELPVPPAVRVFCFKPNIICCTGL 166
           MEAKFFRFLKIVGVGFKARAE+EGR LFLKLGYSHEVEL VPPAVRVFCFKPNI+CCTG+
Sbjct: 1   MEAKFFRFLKIVGVGFKARAESEGRLLFLKLGYSHEVELTVPPAVRVFCFKPNIVCCTGI 60

Query: 165 DKQRVHQFAATVRSCKPPEVYKGKGILYIDEVV 67
           DKQRVHQFAA VRSCKPPEVYKGKGI+YIDEV+
Sbjct: 61  DKQRVHQFAAAVRSCKPPEVYKGKGIMYIDEVI 93


>emb|CAN72978.1| hypothetical protein VITISV_009029 [Vitis vinifera]
          Length = 102

 Score =  182 bits (461), Expect = 3e-44
 Identities = 84/93 (90%), Positives = 90/93 (96%)
 Frame = -2

Query: 345 MEAKFFRFLKIVGVGFKARAETEGRQLFLKLGYSHEVELPVPPAVRVFCFKPNIICCTGL 166
           MEAKFFRFLKIVGVGFKARAE+EGR LFLKLGYSHEVEL VPPAVRVFCFKPN++CCTG+
Sbjct: 1   MEAKFFRFLKIVGVGFKARAESEGRLLFLKLGYSHEVELTVPPAVRVFCFKPNVVCCTGI 60

Query: 165 DKQRVHQFAATVRSCKPPEVYKGKGILYIDEVV 67
           DKQRVHQFAA VRSCKPPEVYKGKGI+YIDEV+
Sbjct: 61  DKQRVHQFAAAVRSCKPPEVYKGKGIMYIDEVI 93


>ref|XP_002527470.1| 50S ribosomal protein L6, putative [Ricinus communis]
           gi|223533110|gb|EEF34868.1| 50S ribosomal protein L6,
           putative [Ricinus communis]
          Length = 102

 Score =  176 bits (447), Expect = 1e-42
 Identities = 81/93 (87%), Positives = 90/93 (96%)
 Frame = -2

Query: 345 MEAKFFRFLKIVGVGFKARAETEGRQLFLKLGYSHEVELPVPPAVRVFCFKPNIICCTGL 166
           MEAKFFRFLKIVGVG+KARAE+EGR L+LKLGYSHEVEL VPPAVRVFCFK N++CCTG+
Sbjct: 1   MEAKFFRFLKIVGVGYKARAESEGRLLYLKLGYSHEVELTVPPAVRVFCFKNNVVCCTGI 60

Query: 165 DKQRVHQFAATVRSCKPPEVYKGKGILYIDEVV 67
           DKQRVHQFAA+VRSCKPPEVYKGKGI+YIDEV+
Sbjct: 61  DKQRVHQFAASVRSCKPPEVYKGKGIMYIDEVI 93


>ref|XP_002310235.1| predicted protein [Populus trichocarpa] gi|118485475|gb|ABK94593.1|
           unknown [Populus trichocarpa]
           gi|118486815|gb|ABK95242.1| unknown [Populus
           trichocarpa] gi|222853138|gb|EEE90685.1| predicted
           protein [Populus trichocarpa]
          Length = 102

 Score =  174 bits (442), Expect = 5e-42
 Identities = 81/93 (87%), Positives = 88/93 (94%)
 Frame = -2

Query: 345 MEAKFFRFLKIVGVGFKARAETEGRQLFLKLGYSHEVELPVPPAVRVFCFKPNIICCTGL 166
           MEAKFFRFLKIVGVG+KARAE EGR LFLKLGYSHEVEL VPPAVRVFCFK N++CCTG+
Sbjct: 1   MEAKFFRFLKIVGVGYKARAEAEGRLLFLKLGYSHEVELTVPPAVRVFCFKNNVVCCTGI 60

Query: 165 DKQRVHQFAATVRSCKPPEVYKGKGILYIDEVV 67
           DK RVHQFAA+VRSCKPPEVYKGKGI+YIDEV+
Sbjct: 61  DKGRVHQFAASVRSCKPPEVYKGKGIMYIDEVI 93


>ref|XP_003536284.1| PREDICTED: 60S ribosomal protein L6, mitochondrial-like [Glycine
           max]
          Length = 102

 Score =  174 bits (441), Expect = 7e-42
 Identities = 80/93 (86%), Positives = 88/93 (94%)
 Frame = -2

Query: 345 MEAKFFRFLKIVGVGFKARAETEGRQLFLKLGYSHEVELPVPPAVRVFCFKPNIICCTGL 166
           MEAKFFRFLKIVGVG+KARAE  GR L+LKLGYSHEVEL VPPAVRVFCFK N+ICCTG+
Sbjct: 1   MEAKFFRFLKIVGVGYKARAEAAGRLLYLKLGYSHEVELAVPPAVRVFCFKNNVICCTGI 60

Query: 165 DKQRVHQFAATVRSCKPPEVYKGKGILYIDEVV 67
           DKQRVHQFAATVR+CKPPEVYKGKGI+Y+DEV+
Sbjct: 61  DKQRVHQFAATVRTCKPPEVYKGKGIMYVDEVI 93