BLASTX nr result
ID: Dioscorea21_contig00021599
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00021599 (350 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003616164.1| Ubiquitin [Medicago truncatula] gi|355517499... 66 3e-09 ref|XP_003616139.1| Ubiquitin [Medicago truncatula] gi|355517474... 65 4e-09 ref|XP_003614921.1| Ubiquitin [Medicago truncatula] gi|355516256... 65 8e-09 emb|CAN77431.1| hypothetical protein VITISV_037121 [Vitis vinifera] 64 1e-08 ref|NP_001141682.1| uncharacterized protein LOC100273809 [Zea ma... 63 2e-08 >ref|XP_003616164.1| Ubiquitin [Medicago truncatula] gi|355517499|gb|AES99122.1| Ubiquitin [Medicago truncatula] Length = 317 Score = 66.2 bits (160), Expect = 3e-09 Identities = 40/120 (33%), Positives = 61/120 (50%), Gaps = 6/120 (5%) Frame = -3 Query: 348 MEISCSNA--GCDETVSYLDRASHQESCIYAQCFCPF--CSFQGCMTSLAQHVADNHKKE 181 +E+SC NA GC E +SY++ H+E CIY C+CP C F L+ HV+ H Sbjct: 68 IEMSCPNAKYGCREKISYIENRKHEEECIYELCYCPLSGCDFAASSEVLSNHVSHKH--- 124 Query: 180 KSAVYLFSYESCFDIVV--TDEEFCILISSDNRLFLLLINRGVAEGTAFSVIGICPAAKE 7 + + FSY F + + DE + +D +LF +L NR G A ++ + P + E Sbjct: 125 RDSHIKFSYGGSFIVSLKSNDETIVLQEENDGKLF-ILNNRTTLLGNAVNICCLGPNSSE 183 >ref|XP_003616139.1| Ubiquitin [Medicago truncatula] gi|355517474|gb|AES99097.1| Ubiquitin [Medicago truncatula] Length = 417 Score = 65.5 bits (158), Expect = 4e-09 Identities = 37/120 (30%), Positives = 66/120 (55%), Gaps = 6/120 (5%) Frame = -3 Query: 348 MEISCSNA--GCDETVSYLDRASHQESCIYAQCFCPF--CSFQGCMTSLAQHVADNHKKE 181 +E+SC NA GC++ +SY+ + +H++ CI+ C+CP C F L++H +D HK Sbjct: 163 LEMSCPNAKYGCNKKISYIRKRNHEKECIHVPCYCPISSCGFVASSEVLSKHFSDKHKDS 222 Query: 180 KSAVYLFSYESCFDIVVTDEEFCILISSDN--RLFLLLINRGVAEGTAFSVIGICPAAKE 7 + FSY F++ + ++ I+ ++ +LF +L NR G A ++ I P + E Sbjct: 223 Q---IKFSYGDSFNVSLKSKDETIVFQEESYGKLF-ILNNRATLLGNAINICCIGPNSFE 278 >ref|XP_003614921.1| Ubiquitin [Medicago truncatula] gi|355516256|gb|AES97879.1| Ubiquitin [Medicago truncatula] Length = 327 Score = 64.7 bits (156), Expect = 8e-09 Identities = 42/121 (34%), Positives = 60/121 (49%), Gaps = 6/121 (4%) Frame = -3 Query: 345 EISCSNA--GCDETVSYLDRASHQESCIYAQCFCPF--CSFQGCMTSLAQHVADNHKKEK 178 EISC N GC ET+SY H++ CIY C+CPF C F L+ H + H + Sbjct: 75 EISCPNEKHGCRETISYCRNRKHEKECIYEPCYCPFSGCDFVASSEVLSSHFSQKHGDSQ 134 Query: 177 SAVYLFSYESCFDIVV--TDEEFCILISSDNRLFLLLINRGVAEGTAFSVIGICPAAKEY 4 + FSY+ F + + DE + +D +LF+L N + G A +V I P + E Sbjct: 135 NK---FSYDHSFIVSLNSNDETVVLQEKNDGQLFILK-NITMFLGNAVNVCCIGPKSSES 190 Query: 3 K 1 K Sbjct: 191 K 191 >emb|CAN77431.1| hypothetical protein VITISV_037121 [Vitis vinifera] Length = 355 Score = 64.3 bits (155), Expect = 1e-08 Identities = 35/98 (35%), Positives = 53/98 (54%), Gaps = 7/98 (7%) Frame = -3 Query: 348 MEISCSNA--GCDETVSYLDRASHQESCIYAQCFCPF--CSFQGCMTSLAQHVADNHKKE 181 +++SC N GC ETVSY + H+ +C Y C CP C+F+G LAQH H Sbjct: 168 VKVSCQNTAYGCKETVSYXKKXDHEVTCNYVPCSCPHSNCNFRGSSKQLAQHFRSKH--- 224 Query: 180 KSAVYLFSYESCFDIVV---TDEEFCILISSDNRLFLL 76 ++V F Y S F + + ++FCIL + + LF++ Sbjct: 225 LNSVIRFQYNSFFPVHLEFNAVDKFCILEAKEGALFIV 262 >ref|NP_001141682.1| uncharacterized protein LOC100273809 [Zea mays] gi|194705536|gb|ACF86852.1| unknown [Zea mays] gi|195658737|gb|ACG48836.1| ubiquitin-protein ligase/ zinc ion binding protein [Zea mays] gi|414877775|tpg|DAA54906.1| TPA: Ubiquitin-protein ligase/ zinc ion binding protein [Zea mays] Length = 327 Score = 63.2 bits (152), Expect = 2e-08 Identities = 37/107 (34%), Positives = 56/107 (52%), Gaps = 5/107 (4%) Frame = -3 Query: 339 SCSNA--GCDETVSYLDRASHQESCIYAQCFCPF--CSFQGCMTSLAQHVADNHKKEKSA 172 SCS A GC++ VSY R +H+ESC++A CP C ++G + H NH + Sbjct: 149 SCSYAKWGCNKLVSYACRNAHEESCLFAPSMCPIPGCGYRGFTGWWSGHFLTNHNSDG-- 206 Query: 171 VYLFSYESCFDI-VVTDEEFCILISSDNRLFLLLINRGVAEGTAFSV 34 FSY CFD+ + F +L++ D+ LF+ + + G A SV Sbjct: 207 -LRFSYGQCFDVSLEMSVPFLVLLAEDDHLFIFINKNVIPFGHALSV 252