BLASTX nr result

ID: Dioscorea21_contig00021599 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00021599
         (350 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003616164.1| Ubiquitin [Medicago truncatula] gi|355517499...    66   3e-09
ref|XP_003616139.1| Ubiquitin [Medicago truncatula] gi|355517474...    65   4e-09
ref|XP_003614921.1| Ubiquitin [Medicago truncatula] gi|355516256...    65   8e-09
emb|CAN77431.1| hypothetical protein VITISV_037121 [Vitis vinifera]    64   1e-08
ref|NP_001141682.1| uncharacterized protein LOC100273809 [Zea ma...    63   2e-08

>ref|XP_003616164.1| Ubiquitin [Medicago truncatula] gi|355517499|gb|AES99122.1|
           Ubiquitin [Medicago truncatula]
          Length = 317

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 40/120 (33%), Positives = 61/120 (50%), Gaps = 6/120 (5%)
 Frame = -3

Query: 348 MEISCSNA--GCDETVSYLDRASHQESCIYAQCFCPF--CSFQGCMTSLAQHVADNHKKE 181
           +E+SC NA  GC E +SY++   H+E CIY  C+CP   C F      L+ HV+  H   
Sbjct: 68  IEMSCPNAKYGCREKISYIENRKHEEECIYELCYCPLSGCDFAASSEVLSNHVSHKH--- 124

Query: 180 KSAVYLFSYESCFDIVV--TDEEFCILISSDNRLFLLLINRGVAEGTAFSVIGICPAAKE 7
           + +   FSY   F + +   DE   +   +D +LF +L NR    G A ++  + P + E
Sbjct: 125 RDSHIKFSYGGSFIVSLKSNDETIVLQEENDGKLF-ILNNRTTLLGNAVNICCLGPNSSE 183


>ref|XP_003616139.1| Ubiquitin [Medicago truncatula] gi|355517474|gb|AES99097.1|
           Ubiquitin [Medicago truncatula]
          Length = 417

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 37/120 (30%), Positives = 66/120 (55%), Gaps = 6/120 (5%)
 Frame = -3

Query: 348 MEISCSNA--GCDETVSYLDRASHQESCIYAQCFCPF--CSFQGCMTSLAQHVADNHKKE 181
           +E+SC NA  GC++ +SY+ + +H++ CI+  C+CP   C F      L++H +D HK  
Sbjct: 163 LEMSCPNAKYGCNKKISYIRKRNHEKECIHVPCYCPISSCGFVASSEVLSKHFSDKHKDS 222

Query: 180 KSAVYLFSYESCFDIVVTDEEFCILISSDN--RLFLLLINRGVAEGTAFSVIGICPAAKE 7
           +     FSY   F++ +  ++  I+   ++  +LF +L NR    G A ++  I P + E
Sbjct: 223 Q---IKFSYGDSFNVSLKSKDETIVFQEESYGKLF-ILNNRATLLGNAINICCIGPNSFE 278


>ref|XP_003614921.1| Ubiquitin [Medicago truncatula] gi|355516256|gb|AES97879.1|
           Ubiquitin [Medicago truncatula]
          Length = 327

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 42/121 (34%), Positives = 60/121 (49%), Gaps = 6/121 (4%)
 Frame = -3

Query: 345 EISCSNA--GCDETVSYLDRASHQESCIYAQCFCPF--CSFQGCMTSLAQHVADNHKKEK 178
           EISC N   GC ET+SY     H++ CIY  C+CPF  C F      L+ H +  H   +
Sbjct: 75  EISCPNEKHGCRETISYCRNRKHEKECIYEPCYCPFSGCDFVASSEVLSSHFSQKHGDSQ 134

Query: 177 SAVYLFSYESCFDIVV--TDEEFCILISSDNRLFLLLINRGVAEGTAFSVIGICPAAKEY 4
           +    FSY+  F + +   DE   +   +D +LF+L  N  +  G A +V  I P + E 
Sbjct: 135 NK---FSYDHSFIVSLNSNDETVVLQEKNDGQLFILK-NITMFLGNAVNVCCIGPKSSES 190

Query: 3   K 1
           K
Sbjct: 191 K 191


>emb|CAN77431.1| hypothetical protein VITISV_037121 [Vitis vinifera]
          Length = 355

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 35/98 (35%), Positives = 53/98 (54%), Gaps = 7/98 (7%)
 Frame = -3

Query: 348 MEISCSNA--GCDETVSYLDRASHQESCIYAQCFCPF--CSFQGCMTSLAQHVADNHKKE 181
           +++SC N   GC ETVSY  +  H+ +C Y  C CP   C+F+G    LAQH    H   
Sbjct: 168 VKVSCQNTAYGCKETVSYXKKXDHEVTCNYVPCSCPHSNCNFRGSSKQLAQHFRSKH--- 224

Query: 180 KSAVYLFSYESCFDIVV---TDEEFCILISSDNRLFLL 76
            ++V  F Y S F + +     ++FCIL + +  LF++
Sbjct: 225 LNSVIRFQYNSFFPVHLEFNAVDKFCILEAKEGALFIV 262


>ref|NP_001141682.1| uncharacterized protein LOC100273809 [Zea mays]
           gi|194705536|gb|ACF86852.1| unknown [Zea mays]
           gi|195658737|gb|ACG48836.1| ubiquitin-protein ligase/
           zinc ion binding protein [Zea mays]
           gi|414877775|tpg|DAA54906.1| TPA: Ubiquitin-protein
           ligase/ zinc ion binding protein [Zea mays]
          Length = 327

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 37/107 (34%), Positives = 56/107 (52%), Gaps = 5/107 (4%)
 Frame = -3

Query: 339 SCSNA--GCDETVSYLDRASHQESCIYAQCFCPF--CSFQGCMTSLAQHVADNHKKEKSA 172
           SCS A  GC++ VSY  R +H+ESC++A   CP   C ++G     + H   NH  +   
Sbjct: 149 SCSYAKWGCNKLVSYACRNAHEESCLFAPSMCPIPGCGYRGFTGWWSGHFLTNHNSDG-- 206

Query: 171 VYLFSYESCFDI-VVTDEEFCILISSDNRLFLLLINRGVAEGTAFSV 34
              FSY  CFD+ +     F +L++ D+ LF+ +    +  G A SV
Sbjct: 207 -LRFSYGQCFDVSLEMSVPFLVLLAEDDHLFIFINKNVIPFGHALSV 252


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