BLASTX nr result

ID: Dioscorea21_contig00021193 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00021193
         (427 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_189511.2| uncharacterized protein [Arabidopsis thaliana] ...   196   1e-48
ref|NP_001189995.1| uncharacterized protein [Arabidopsis thalian...   196   1e-48
ref|XP_002875463.1| hypothetical protein ARALYDRAFT_905140 [Arab...   196   2e-48
ref|XP_004148686.1| PREDICTED: protein midA, mitochondrial-like ...   194   8e-48
ref|XP_002276826.1| PREDICTED: protein midA, mitochondrial [Viti...   194   8e-48

>ref|NP_189511.2| uncharacterized protein [Arabidopsis thaliana]
           gi|95147286|gb|ABF57278.1| At3g28700 [Arabidopsis
           thaliana] gi|332643957|gb|AEE77478.1| uncharacterized
           protein [Arabidopsis thaliana]
          Length = 471

 Score =  196 bits (499), Expect = 1e-48
 Identities = 96/122 (78%), Positives = 102/122 (83%)
 Frame = +3

Query: 60  PTASISIDRSGLYNXXXXXXXXXXXXXLVKHLKSIIKFRGGPITVAEYMEEVLTNPTSGF 239
           P  +ISIDRS LY              LVKHLKSIIKFRGGPI+VAEYMEEVLTNP +GF
Sbjct: 51  PGTTISIDRSSLYTPPDHSHESTPDSELVKHLKSIIKFRGGPISVAEYMEEVLTNPKAGF 110

Query: 240 YMNRDVFGAGGDFITSPEVSQMFGEMIGVWTMCLWEQMGQPERVNLIELGPGRGTLMVDL 419
           YMNRDVFGA GDFITSPEVSQMFGEMIGVWT+CLWEQMG+PERVNL+ELGPGRGTLM DL
Sbjct: 111 YMNRDVFGAQGDFITSPEVSQMFGEMIGVWTVCLWEQMGRPERVNLVELGPGRGTLMADL 170

Query: 420 LR 425
           LR
Sbjct: 171 LR 172


>ref|NP_001189995.1| uncharacterized protein [Arabidopsis thaliana]
           gi|332643958|gb|AEE77479.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 471

 Score =  196 bits (499), Expect = 1e-48
 Identities = 96/122 (78%), Positives = 102/122 (83%)
 Frame = +3

Query: 60  PTASISIDRSGLYNXXXXXXXXXXXXXLVKHLKSIIKFRGGPITVAEYMEEVLTNPTSGF 239
           P  +ISIDRS LY              LVKHLKSIIKFRGGPI+VAEYMEEVLTNP +GF
Sbjct: 51  PGTTISIDRSSLYTPPDHSHESTPDSELVKHLKSIIKFRGGPISVAEYMEEVLTNPKAGF 110

Query: 240 YMNRDVFGAGGDFITSPEVSQMFGEMIGVWTMCLWEQMGQPERVNLIELGPGRGTLMVDL 419
           YMNRDVFGA GDFITSPEVSQMFGEMIGVWT+CLWEQMG+PERVNL+ELGPGRGTLM DL
Sbjct: 111 YMNRDVFGAQGDFITSPEVSQMFGEMIGVWTVCLWEQMGRPERVNLVELGPGRGTLMADL 170

Query: 420 LR 425
           LR
Sbjct: 171 LR 172


>ref|XP_002875463.1| hypothetical protein ARALYDRAFT_905140 [Arabidopsis lyrata subsp.
           lyrata] gi|297321301|gb|EFH51722.1| hypothetical protein
           ARALYDRAFT_905140 [Arabidopsis lyrata subsp. lyrata]
          Length = 471

 Score =  196 bits (498), Expect = 2e-48
 Identities = 95/122 (77%), Positives = 102/122 (83%)
 Frame = +3

Query: 60  PTASISIDRSGLYNXXXXXXXXXXXXXLVKHLKSIIKFRGGPITVAEYMEEVLTNPTSGF 239
           P  +IS+DRS LY              LVKHLKSIIKFRGGPI+VAEYMEEVLTNP +GF
Sbjct: 51  PGTTISVDRSSLYTPPDHSHESTPETELVKHLKSIIKFRGGPISVAEYMEEVLTNPKAGF 110

Query: 240 YMNRDVFGAGGDFITSPEVSQMFGEMIGVWTMCLWEQMGQPERVNLIELGPGRGTLMVDL 419
           YMNRDVFGA GDFITSPEVSQMFGEMIGVWT+CLWEQMG+PERVNL+ELGPGRGTLM DL
Sbjct: 111 YMNRDVFGAQGDFITSPEVSQMFGEMIGVWTVCLWEQMGRPERVNLVELGPGRGTLMADL 170

Query: 420 LR 425
           LR
Sbjct: 171 LR 172


>ref|XP_004148686.1| PREDICTED: protein midA, mitochondrial-like [Cucumis sativus]
          Length = 493

 Score =  194 bits (492), Expect = 8e-48
 Identities = 94/130 (72%), Positives = 106/130 (81%), Gaps = 1/130 (0%)
 Frame = +3

Query: 39  ENHYDSRP-TASISIDRSGLYNXXXXXXXXXXXXXLVKHLKSIIKFRGGPITVAEYMEEV 215
           +  + S P T++ISIDRSGL N             LVKHLK IIKFRGGPI++AEYMEEV
Sbjct: 61  QRSFSSEPSTSTISIDRSGLCNPPEHSHEPSSDTELVKHLKGIIKFRGGPISIAEYMEEV 120

Query: 216 LTNPTSGFYMNRDVFGAGGDFITSPEVSQMFGEMIGVWTMCLWEQMGQPERVNLIELGPG 395
           LTNP +GFY+NRDVFGA GDFITSPEVSQMFGEM+GVW MCLWEQMG+PE+VNL+ELGPG
Sbjct: 121 LTNPKAGFYINRDVFGAEGDFITSPEVSQMFGEMVGVWAMCLWEQMGRPEKVNLVELGPG 180

Query: 396 RGTLMVDLLR 425
           RGTLM DLLR
Sbjct: 181 RGTLMADLLR 190


>ref|XP_002276826.1| PREDICTED: protein midA, mitochondrial [Vitis vinifera]
           gi|296087782|emb|CBI35038.3| unnamed protein product
           [Vitis vinifera]
          Length = 483

 Score =  194 bits (492), Expect = 8e-48
 Identities = 94/124 (75%), Positives = 101/124 (81%)
 Frame = +3

Query: 54  SRPTASISIDRSGLYNXXXXXXXXXXXXXLVKHLKSIIKFRGGPITVAEYMEEVLTNPTS 233
           S+ T+ ISIDRS LYN             LVKHLK IIKFRGGPI+VAEYMEEVLTNP +
Sbjct: 57  SQATSKISIDRSALYNPPEHSHEHSSDSELVKHLKGIIKFRGGPISVAEYMEEVLTNPKA 116

Query: 234 GFYMNRDVFGAGGDFITSPEVSQMFGEMIGVWTMCLWEQMGQPERVNLIELGPGRGTLMV 413
           GFY+NRDVFG  GDFITSPEVSQMFGEMIGVW MCLWEQMGQP +VNL+ELGPGRGTLM 
Sbjct: 117 GFYINRDVFGTEGDFITSPEVSQMFGEMIGVWVMCLWEQMGQPSKVNLVELGPGRGTLMA 176

Query: 414 DLLR 425
           DLLR
Sbjct: 177 DLLR 180


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