BLASTX nr result

ID: Dioscorea21_contig00021048 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00021048
         (899 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI35119.3| unnamed protein product [Vitis vinifera]              140   2e-52
ref|XP_002264402.1| PREDICTED: U-box domain-containing protein 4...   140   2e-52
emb|CAN81127.1| hypothetical protein VITISV_005390 [Vitis vinifera]   140   2e-52
ref|XP_002513039.1| ubiquitin-protein ligase, putative [Ricinus ...   141   1e-50
ref|XP_002299200.1| predicted protein [Populus trichocarpa] gi|2...   135   7e-50

>emb|CBI35119.3| unnamed protein product [Vitis vinifera]
          Length = 311

 Score =  140 bits (352), Expect(2) = 2e-52
 Identities = 87/178 (48%), Positives = 108/178 (60%), Gaps = 4/178 (2%)
 Frame = +3

Query: 3   VKRRTARSLVDRLQSVHDE---EVLAEIRLMSKHDAEMRTLLADAGVTPHXXXXXXXXXX 173
           VKRRTARSLV RL SV  +   E L E+RL+SKHD + R  +ADAG  P+          
Sbjct: 3   VKRRTARSLVARLSSVSQQTRTEALCELRLISKHDPDSRCFIADAGAVPYLCETLYSALP 62

Query: 174 XXXXXXXIENATASLLNLSISCPEALMSTPGXXXXXXXXXXXXXXXXXX-QHAAATLFSL 350
                   ENA A+LLNLSIS  + LMST G                   Q  AATL+SL
Sbjct: 63  LEQ-----ENAAATLLNLSISSRQLLMSTRGLLDALSHALRSPSSSPAAIQACAATLYSL 117

Query: 351 LSVESFRPIIGSKRSIVSALVELVKSPKSRTRSIKDAVKALFGISLYPMNRPMMVEIG 524
           L  + +RPIIG+KR IV ALV+++++P +  RSIKDA+KALFGISLYP+NR  MV +G
Sbjct: 118 LVDDDYRPIIGAKRDIVYALVDIIRTPHAPPRSIKDALKALFGISLYPLNRASMVGLG 175



 Score = 92.8 bits (229), Expect(2) = 2e-52
 Identities = 56/123 (45%), Positives = 69/123 (56%), Gaps = 1/123 (0%)
 Frame = +2

Query: 527 AVLFSLVVKDGRTGIVEDATAVIAQVAGCVESLEAFRKVAGVRVLVDLVDLETGXXXXXX 706
           A LF+L VKDGR GIVEDATAVIAQ+AGC E  +AFRKV+G+ +LVDL+D  TG      
Sbjct: 178 AALFTLAVKDGRVGIVEDATAVIAQIAGCEEGGDAFRKVSGIGILVDLLDPSTGSSIRTK 237

Query: 707 XXXXXXLLNLVMSGGESXXXXXXXXXXXXXXXXXXXXK-GSLRAKTKAGPLLKAMNSGRR 883
                 LLNLV  GGE                       GS + K+KA  LLK ++ GR 
Sbjct: 238 ENAVSALLNLVQCGGERIAGDMREAGMGLYDGIAVVADGGSPKGKSKAIALLKLLDGGRE 297

Query: 884 DQW 892
            ++
Sbjct: 298 PRF 300


>ref|XP_002264402.1| PREDICTED: U-box domain-containing protein 4 [Vitis vinifera]
          Length = 309

 Score =  140 bits (352), Expect(2) = 2e-52
 Identities = 87/178 (48%), Positives = 108/178 (60%), Gaps = 4/178 (2%)
 Frame = +3

Query: 3   VKRRTARSLVDRLQSVHDE---EVLAEIRLMSKHDAEMRTLLADAGVTPHXXXXXXXXXX 173
           VKRRTARSLV RL SV  +   E L E+RL+SKHD + R  +ADAG  P+          
Sbjct: 3   VKRRTARSLVARLSSVSQQTRTEALCELRLISKHDPDSRCFIADAGAVPYLCETLYSALP 62

Query: 174 XXXXXXXIENATASLLNLSISCPEALMSTPGXXXXXXXXXXXXXXXXXX-QHAAATLFSL 350
                   ENA A+LLNLSIS  + LMST G                   Q  AATL+SL
Sbjct: 63  LEQ-----ENAAATLLNLSISSRQLLMSTRGLLDALSHALRSPSSSPAAIQACAATLYSL 117

Query: 351 LSVESFRPIIGSKRSIVSALVELVKSPKSRTRSIKDAVKALFGISLYPMNRPMMVEIG 524
           L  + +RPIIG+KR IV ALV+++++P +  RSIKDA+KALFGISLYP+NR  MV +G
Sbjct: 118 LVDDDYRPIIGAKRDIVYALVDIIRTPHAPPRSIKDALKALFGISLYPLNRASMVGLG 175



 Score = 92.8 bits (229), Expect(2) = 2e-52
 Identities = 56/123 (45%), Positives = 69/123 (56%), Gaps = 1/123 (0%)
 Frame = +2

Query: 527 AVLFSLVVKDGRTGIVEDATAVIAQVAGCVESLEAFRKVAGVRVLVDLVDLETGXXXXXX 706
           A LF+L VKDGR GIVEDATAVIAQ+AGC E  +AFRKV+G+ +LVDL+D  TG      
Sbjct: 178 AALFTLAVKDGRVGIVEDATAVIAQIAGCEEGGDAFRKVSGIGILVDLLDPSTGSSIRTK 237

Query: 707 XXXXXXLLNLVMSGGESXXXXXXXXXXXXXXXXXXXXK-GSLRAKTKAGPLLKAMNSGRR 883
                 LLNLV  GGE                       GS + K+KA  LLK ++ GR 
Sbjct: 238 ENAVSALLNLVQCGGERIAGDMREAGMGLYDGIAVVADGGSPKGKSKAIALLKLLDGGRE 297

Query: 884 DQW 892
            ++
Sbjct: 298 PRF 300


>emb|CAN81127.1| hypothetical protein VITISV_005390 [Vitis vinifera]
          Length = 309

 Score =  140 bits (352), Expect(2) = 2e-52
 Identities = 87/178 (48%), Positives = 108/178 (60%), Gaps = 4/178 (2%)
 Frame = +3

Query: 3   VKRRTARSLVDRLQSVHDE---EVLAEIRLMSKHDAEMRTLLADAGVTPHXXXXXXXXXX 173
           VKRRTARSLV RL SV  +   E L E+RL+SKHD + R  +ADAG  P+          
Sbjct: 3   VKRRTARSLVARLSSVSQQTRTEALCELRLISKHDPDSRCFIADAGAVPYLCETLYSALP 62

Query: 174 XXXXXXXIENATASLLNLSISCPEALMSTPGXXXXXXXXXXXXXXXXXX-QHAAATLFSL 350
                   ENA A+LLNLSIS  + LMST G                   Q  AATL+SL
Sbjct: 63  LEQ-----ENAAATLLNLSISSRQLLMSTRGLLDALSHALRSPSSSPAAIQACAATLYSL 117

Query: 351 LSVESFRPIIGSKRSIVSALVELVKSPKSRTRSIKDAVKALFGISLYPMNRPMMVEIG 524
           L  + +RPIIG+KR IV ALV+++++P +  RSIKDA+KALFGISLYP+NR  MV +G
Sbjct: 118 LVDDDYRPIIGAKRDIVYALVDIIRTPHAPPRSIKDALKALFGISLYPLNRASMVGLG 175



 Score = 92.8 bits (229), Expect(2) = 2e-52
 Identities = 57/123 (46%), Positives = 68/123 (55%), Gaps = 1/123 (0%)
 Frame = +2

Query: 527 AVLFSLVVKDGRTGIVEDATAVIAQVAGCVESLEAFRKVAGVRVLVDLVDLETGXXXXXX 706
           A LFSL VKDGR GIVEDATAVIAQ+AGC E  +AFRKV+G+ VLVDL+D  TG      
Sbjct: 178 AALFSLAVKDGRVGIVEDATAVIAQIAGCEEGGDAFRKVSGIGVLVDLLDPSTGSSIRTK 237

Query: 707 XXXXXXLLNLVMSGGESXXXXXXXXXXXXXXXXXXXXK-GSLRAKTKAGPLLKAMNSGRR 883
                 LLNL   GGE                       GS + K+KA  LLK ++ GR 
Sbjct: 238 ENAVSALLNLAQCGGERIAGDMREAGMGLYDGIAVVADGGSPKGKSKAIALLKLLDGGRE 297

Query: 884 DQW 892
            ++
Sbjct: 298 PRF 300


>ref|XP_002513039.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223548050|gb|EEF49542.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 310

 Score =  141 bits (355), Expect(2) = 1e-50
 Identities = 83/180 (46%), Positives = 114/180 (63%), Gaps = 6/180 (3%)
 Frame = +3

Query: 3   VKRRTARSLVDRLQSVHDE---EVLAEIRLMSKHDAEMRTLLADAGVTPHXXXXXXXXXX 173
           VKRRTARSLV +L SV ++   E L+E+RL++KHD + R ++A+ G  P+          
Sbjct: 3   VKRRTARSLVSKLSSVSEQTRSEALSELRLITKHDPDSRPIIAECGAIPYLAETLYSSSH 62

Query: 174 XXXXXXXIENATASLLNLSISCPEALMSTPGXXXXXXXXXXXXXXXXXX---QHAAATLF 344
                   ENA A+LLNLSIS  ++LMST G                     Q +AATL 
Sbjct: 63  TAQ-----ENAAATLLNLSISTRDSLMSTRGLLDALGHALSHHSTTTSPLAVQSSAATLH 117

Query: 345 SLLSVESFRPIIGSKRSIVSALVELVKSPKSRTRSIKDAVKALFGISLYPMNRPMMVEIG 524
           SLL V+S+RPIIGSKR IV +L+++VKSP S  RS+KDA+KA+FGI+LYP+NR  ++++G
Sbjct: 118 SLLIVDSYRPIIGSKRDIVYSLIDIVKSPNSPPRSVKDALKAMFGIALYPLNRCTLIDLG 177



 Score = 85.5 bits (210), Expect(2) = 1e-50
 Identities = 54/123 (43%), Positives = 67/123 (54%), Gaps = 3/123 (2%)
 Frame = +2

Query: 518 DWGAV--LFSLVVKDGRTGIVEDATAVIAQVAGCVESLEAFRKVAGVRVLVDLVDLETGX 691
           D GAV  LFSLV+KDGR GIVEDATAV+AQ+AGC ES   F + +GV +L+DL+DL TG 
Sbjct: 175 DLGAVAPLFSLVLKDGRVGIVEDATAVVAQIAGCEESEGEFARYSGVGILIDLLDLATGS 234

Query: 692 XXXXXXXXXXXLLNLVMSGGESXXXXXXXXXXXXXXXXXXXXK-GSLRAKTKAGPLLKAM 868
                      LLNLV  GGE                     + G+ + K KA  L+K +
Sbjct: 235 SLRIKENAVSALLNLVRCGGERVAADVRDMAAIVVEGIKEVAENGTSKGKAKAVALVKVI 294

Query: 869 NSG 877
             G
Sbjct: 295 EGG 297


>ref|XP_002299200.1| predicted protein [Populus trichocarpa] gi|222846458|gb|EEE84005.1|
           predicted protein [Populus trichocarpa]
          Length = 305

 Score =  135 bits (340), Expect(2) = 7e-50
 Identities = 83/181 (45%), Positives = 111/181 (61%), Gaps = 6/181 (3%)
 Frame = +3

Query: 3   VKRRTARSLVDRLQSVHDE---EVLAEIRLMSKHDAEMRTLLADAGVTPHXXXXXXXXXX 173
           VKRRTAR LV RL SV ++   E LAE+RLM+K+DAE R ++A+AG  P+          
Sbjct: 3   VKRRTARLLVTRLGSVSEQTRSEALAELRLMTKNDAESRPIIAEAGAIPYLEETLYSSSH 62

Query: 174 XXXXXXXIENATASLLNLSISCPEALMSTPGXXXXXXXXXXXXXXXXXX---QHAAATLF 344
                   +NA A LLN+SIS   ALMST G                     Q +AATL 
Sbjct: 63  DSQ-----DNAAAILLNISISSRTALMSTRGLLDAISHVLRHHATNSSPFAVQSSAATLH 117

Query: 345 SLLSVESFRPIIGSKRSIVSALVELVKSPKSRTRSIKDAVKALFGISLYPMNRPMMVEIG 524
           SLL  +S+RP+IG+KR IV +L+E++K P S  RS+KDA+KALFGI+L+P+NR  ++ +G
Sbjct: 118 SLLVDDSYRPVIGAKRDIVYSLIEIIKRPNSPPRSVKDALKALFGIALFPLNRANLIGLG 177

Query: 525 G 527
           G
Sbjct: 178 G 178



 Score = 89.0 bits (219), Expect(2) = 7e-50
 Identities = 54/121 (44%), Positives = 67/121 (55%), Gaps = 1/121 (0%)
 Frame = +2

Query: 527 AVLFSLVVKDGRTGIVEDATAVIAQVAGCVESLEAFRKVAGVRVLVDLVDLETGXXXXXX 706
           A LFSLV+KDGR GIVEDATAVIAQ+AGC ES   F KV+GV+VLVDL+D+ TG      
Sbjct: 180 AALFSLVLKDGRVGIVEDATAVIAQIAGCAESEREFWKVSGVKVLVDLLDVGTGSSERVK 239

Query: 707 XXXXXXLLNLVMSGGESXXXXXXXXXXXXXXXXXXXXK-GSLRAKTKAGPLLKAMNSGRR 883
                 LLNLV  GG                      + G+ + K+K   LLK +  G +
Sbjct: 240 ENAVGALLNLVSCGGGGVVKQVKEMGPGAVEGIRDVVENGTAKGKSKGIALLKVVEGGAK 299

Query: 884 D 886
           +
Sbjct: 300 E 300


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