BLASTX nr result

ID: Dioscorea21_contig00020280 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00020280
         (448 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFS65104.1| 40S ribosomal protein S3a-like protein [Elaeis gu...   259   2e-67
gb|EEE53089.1| hypothetical protein OsJ_35850 [Oryza sativa Japo...   259   2e-67
gb|EEC69140.1| hypothetical protein OsI_38068 [Oryza sativa Indi...   259   2e-67
ref|NP_001066631.1| Os12g0406200 [Oryza sativa Japonica Group] g...   259   2e-67
gb|ABK56834.1| RPS3 [Cymbidium hybrid cultivar]                       257   6e-67

>gb|AFS65104.1| 40S ribosomal protein S3a-like protein [Elaeis guineensis]
          Length = 261

 Score =  259 bits (662), Expect = 2e-67
 Identities = 124/132 (93%), Positives = 130/132 (98%)
 Frame = +1

Query: 52  VDPFAKKDWYDIKAPSVFSVRNVGKTLVSKTQGTKIASEGLKHRVFEVSLADLQNDEDQA 231
           VDPFAKKDWYDIKAPSVF+VRN+GKTLVS+TQGTKIASEGLKHRVFE+SLADLQNDEDQA
Sbjct: 21  VDPFAKKDWYDIKAPSVFNVRNIGKTLVSRTQGTKIASEGLKHRVFEISLADLQNDEDQA 80

Query: 232 YRKIRLRVEDVQGKNVLTNFWGMNFTTDKLRSLVRKWQTLIEAHVDVKTTDNYSLRMFCI 411
           YRKIRLR EDVQGKNVLTNFWGM+FTTDKLRSLVRKWQTLIEAHVDVKTTDNY+LRMFCI
Sbjct: 81  YRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYTLRMFCI 140

Query: 412 AFTKRRPNQVKR 447
            FTKRRPNQVKR
Sbjct: 141 GFTKRRPNQVKR 152


>gb|EEE53089.1| hypothetical protein OsJ_35850 [Oryza sativa Japonica Group]
          Length = 764

 Score =  259 bits (661), Expect = 2e-67
 Identities = 125/133 (93%), Positives = 130/133 (97%)
 Frame = +1

Query: 49  TVDPFAKKDWYDIKAPSVFSVRNVGKTLVSKTQGTKIASEGLKHRVFEVSLADLQNDEDQ 228
           TVDPFAKKDWYDIKAPSVF+VRNVGKTLVS+TQGTKIASEGLKHRVFEVSLADLQNDEDQ
Sbjct: 20  TVDPFAKKDWYDIKAPSVFNVRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQ 79

Query: 229 AYRKIRLRVEDVQGKNVLTNFWGMNFTTDKLRSLVRKWQTLIEAHVDVKTTDNYSLRMFC 408
           AYRKIRLR EDVQGKNVLTNFWGM+FTTDKLRSLV+KWQTLIEAHVDVKTTDNY LR+FC
Sbjct: 80  AYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVKKWQTLIEAHVDVKTTDNYMLRLFC 139

Query: 409 IAFTKRRPNQVKR 447
           I FTKRRPNQVKR
Sbjct: 140 IGFTKRRPNQVKR 152


>gb|EEC69140.1| hypothetical protein OsI_38068 [Oryza sativa Indica Group]
          Length = 818

 Score =  259 bits (661), Expect = 2e-67
 Identities = 125/133 (93%), Positives = 130/133 (97%)
 Frame = +1

Query: 49  TVDPFAKKDWYDIKAPSVFSVRNVGKTLVSKTQGTKIASEGLKHRVFEVSLADLQNDEDQ 228
           TVDPFAKKDWYDIKAPSVF+VRNVGKTLVS+TQGTKIASEGLKHRVFEVSLADLQNDEDQ
Sbjct: 20  TVDPFAKKDWYDIKAPSVFNVRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQ 79

Query: 229 AYRKIRLRVEDVQGKNVLTNFWGMNFTTDKLRSLVRKWQTLIEAHVDVKTTDNYSLRMFC 408
           AYRKIRLR EDVQGKNVLTNFWGM+FTTDKLRSLV+KWQTLIEAHVDVKTTDNY LR+FC
Sbjct: 80  AYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVKKWQTLIEAHVDVKTTDNYMLRLFC 139

Query: 409 IAFTKRRPNQVKR 447
           I FTKRRPNQVKR
Sbjct: 140 IGFTKRRPNQVKR 152


>ref|NP_001066631.1| Os12g0406200 [Oryza sativa Japonica Group]
           gi|108862547|gb|ABG21991.1| 40S ribosomal protein S3a,
           putative, expressed [Oryza sativa Japonica Group]
           gi|113649138|dbj|BAF29650.1| Os12g0406200 [Oryza sativa
           Japonica Group]
          Length = 260

 Score =  259 bits (661), Expect = 2e-67
 Identities = 125/133 (93%), Positives = 130/133 (97%)
 Frame = +1

Query: 49  TVDPFAKKDWYDIKAPSVFSVRNVGKTLVSKTQGTKIASEGLKHRVFEVSLADLQNDEDQ 228
           TVDPFAKKDWYDIKAPSVF+VRNVGKTLVS+TQGTKIASEGLKHRVFEVSLADLQNDEDQ
Sbjct: 20  TVDPFAKKDWYDIKAPSVFNVRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQ 79

Query: 229 AYRKIRLRVEDVQGKNVLTNFWGMNFTTDKLRSLVRKWQTLIEAHVDVKTTDNYSLRMFC 408
           AYRKIRLR EDVQGKNVLTNFWGM+FTTDKLRSLV+KWQTLIEAHVDVKTTDNY LR+FC
Sbjct: 80  AYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVKKWQTLIEAHVDVKTTDNYMLRLFC 139

Query: 409 IAFTKRRPNQVKR 447
           I FTKRRPNQVKR
Sbjct: 140 IGFTKRRPNQVKR 152


>gb|ABK56834.1| RPS3 [Cymbidium hybrid cultivar]
          Length = 261

 Score =  257 bits (657), Expect = 6e-67
 Identities = 121/133 (90%), Positives = 131/133 (98%)
 Frame = +1

Query: 49  TVDPFAKKDWYDIKAPSVFSVRNVGKTLVSKTQGTKIASEGLKHRVFEVSLADLQNDEDQ 228
           TVDPF+KKDWYDIKAPSVF+VRN+GKTLVS+TQGTKIASEGLKHRVFE+SLADLQNDEDQ
Sbjct: 20  TVDPFSKKDWYDIKAPSVFTVRNIGKTLVSRTQGTKIASEGLKHRVFEISLADLQNDEDQ 79

Query: 229 AYRKIRLRVEDVQGKNVLTNFWGMNFTTDKLRSLVRKWQTLIEAHVDVKTTDNYSLRMFC 408
           +YRKIRLR EDVQGKNVLTNFWGM+FTTDKLRSLVRKWQTLIEAH+DVKTTDNY+LR+FC
Sbjct: 80  SYRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHIDVKTTDNYTLRLFC 139

Query: 409 IAFTKRRPNQVKR 447
           I FTKRRPNQVKR
Sbjct: 140 IGFTKRRPNQVKR 152


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