BLASTX nr result

ID: Dioscorea21_contig00019989 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00019989
         (639 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267276.1| PREDICTED: ras-related protein RABC2a [Vitis...   260   2e-67
gb|AFK48828.1| unknown [Medicago truncatula]                          241   1e-61
gb|AFK40035.1| unknown [Medicago truncatula]                          241   1e-61
ref|XP_002322909.1| predicted protein [Populus trichocarpa] gi|2...   240   2e-61
ref|NP_568121.1| RAB GTPase-C2A [Arabidopsis thaliana] gi|297810...   238   7e-61

>ref|XP_002267276.1| PREDICTED: ras-related protein RABC2a [Vitis vinifera]
           gi|297739985|emb|CBI30167.3| unnamed protein product
           [Vitis vinifera]
          Length = 211

 Score =  260 bits (664), Expect = 2e-67
 Identities = 124/145 (85%), Positives = 136/145 (93%)
 Frame = -3

Query: 637 WDTAGQERFRTLTGSYYRGAQGIILVYDVTRRETFTNLSDEWAKEIELYSTNQDCAKVLV 458
           WDTAGQERFRTLT SYYRGAQGIILVYDVTRRE+FTNLSD WAKE+ELYSTNQDC K+LV
Sbjct: 67  WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRESFTNLSDVWAKEVELYSTNQDCVKMLV 126

Query: 457 GNKVDQETDRMVSREEGIALAQEYGCLFLECSAKTRENVEKCFEELALKILEVPSLLEEG 278
           GNKVD+E++R+VSREEGIALA+E+GCLF ECSAKTRENVEKCFEELALKI+EVPSLLEEG
Sbjct: 127 GNKVDRESERVVSREEGIALAKEHGCLFFECSAKTRENVEKCFEELALKIMEVPSLLEEG 186

Query: 277 SSVGKRNILKQKQENHPTPSRGCCS 203
           S+VGKRNILK K EN P P+ GCCS
Sbjct: 187 STVGKRNILKPKPENQPPPTGGCCS 211


>gb|AFK48828.1| unknown [Medicago truncatula]
          Length = 158

 Score =  241 bits (614), Expect = 1e-61
 Identities = 114/145 (78%), Positives = 131/145 (90%)
 Frame = -3

Query: 637 WDTAGQERFRTLTGSYYRGAQGIILVYDVTRRETFTNLSDEWAKEIELYSTNQDCAKVLV 458
           WDTAGQERFRTLT SYYRGAQGIILVYDVTRRETFTNLS+ W+KE+ELYSTNQ+C K+LV
Sbjct: 14  WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSEVWSKELELYSTNQECVKMLV 73

Query: 457 GNKVDQETDRMVSREEGIALAQEYGCLFLECSAKTRENVEKCFEELALKILEVPSLLEEG 278
           GNKVD++++R VSREEG++LA+E GCL LECSAKTRENVEKCFEELALKI+E PSLLEEG
Sbjct: 74  GNKVDKDSERAVSREEGLSLAKELGCLLLECSAKTRENVEKCFEELALKIMEAPSLLEEG 133

Query: 277 SSVGKRNILKQKQENHPTPSRGCCS 203
           S+  KRN+LKQKQE   + + GCCS
Sbjct: 134 SAATKRNVLKQKQEPQSSQNGGCCS 158


>gb|AFK40035.1| unknown [Medicago truncatula]
          Length = 214

 Score =  241 bits (614), Expect = 1e-61
 Identities = 114/145 (78%), Positives = 131/145 (90%)
 Frame = -3

Query: 637 WDTAGQERFRTLTGSYYRGAQGIILVYDVTRRETFTNLSDEWAKEIELYSTNQDCAKVLV 458
           WDTAGQERFRTLT SYYRGAQGIILVYDVTRRETFTNLS+ W+KE+ELYSTNQ+C K+LV
Sbjct: 70  WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSEVWSKELELYSTNQECVKMLV 129

Query: 457 GNKVDQETDRMVSREEGIALAQEYGCLFLECSAKTRENVEKCFEELALKILEVPSLLEEG 278
           GNKVD++++R VSREEG++LA+E GCL LECSAKTRENVEKCFEELALKI+E PSLLEEG
Sbjct: 130 GNKVDKDSERAVSREEGLSLAKELGCLLLECSAKTRENVEKCFEELALKIMEAPSLLEEG 189

Query: 277 SSVGKRNILKQKQENHPTPSRGCCS 203
           S+  KRN+LKQKQE   + + GCCS
Sbjct: 190 SAATKRNVLKQKQEPQSSQNGGCCS 214


>ref|XP_002322909.1| predicted protein [Populus trichocarpa] gi|222867539|gb|EEF04670.1|
           predicted protein [Populus trichocarpa]
          Length = 208

 Score =  240 bits (612), Expect = 2e-61
 Identities = 114/145 (78%), Positives = 131/145 (90%)
 Frame = -3

Query: 637 WDTAGQERFRTLTGSYYRGAQGIILVYDVTRRETFTNLSDEWAKEIELYSTNQDCAKVLV 458
           WDTAGQERFRTLT SYYR AQGIILVYDVTRRETFTNLSD W KE+EL+STNQDC K+LV
Sbjct: 64  WDTAGQERFRTLTSSYYRNAQGIILVYDVTRRETFTNLSDVWGKEVELFSTNQDCVKMLV 123

Query: 457 GNKVDQETDRMVSREEGIALAQEYGCLFLECSAKTRENVEKCFEELALKILEVPSLLEEG 278
           GNKVD+E+ R V+++EG+ALA+++GCLFLECSAKTRENVE+CFEELALKI+EVPSLLEEG
Sbjct: 124 GNKVDKESGRDVTKDEGMALAKQHGCLFLECSAKTRENVEQCFEELALKIMEVPSLLEEG 183

Query: 277 SSVGKRNILKQKQENHPTPSRGCCS 203
           S+  KRNILKQK E+H   + GCCS
Sbjct: 184 STAVKRNILKQKPEHHVASNGGCCS 208


>ref|NP_568121.1| RAB GTPase-C2A [Arabidopsis thaliana]
           gi|297810433|ref|XP_002873100.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
           gi|75098916|sp|O49841.1|RAC2A_ARATH RecName:
           Full=Ras-related protein RABC2a; Short=AtRABC2a;
           AltName: Full=Ras-related protein Rab18B; Short=AtRab18B
           gi|2723477|dbj|BAA24074.1| GTP-binding protein
           [Arabidopsis thaliana] gi|7378638|emb|CAB83314.1| AtRab
           GTP-binding protein [Arabidopsis thaliana]
           gi|26453054|dbj|BAC43603.1| putative AtRab GTP-binding
           protein [Arabidopsis thaliana]
           gi|29824251|gb|AAP04086.1| unknown protein [Arabidopsis
           thaliana] gi|297318937|gb|EFH49359.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
           gi|332003236|gb|AED90619.1| RAB GTPase-C2A [Arabidopsis
           thaliana]
          Length = 210

 Score =  238 bits (607), Expect = 7e-61
 Identities = 115/145 (79%), Positives = 128/145 (88%)
 Frame = -3

Query: 637 WDTAGQERFRTLTGSYYRGAQGIILVYDVTRRETFTNLSDEWAKEIELYSTNQDCAKVLV 458
           WDTAGQERFRTLT SYYRGAQGIILVYDVTRRETFTNL D W KEIELYSTNQ+C ++LV
Sbjct: 66  WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLVDVWGKEIELYSTNQECVRMLV 125

Query: 457 GNKVDQETDRMVSREEGIALAQEYGCLFLECSAKTRENVEKCFEELALKILEVPSLLEEG 278
           GNKVD+E++R VSREEGIALA+E  C+FLECSA+TR+NVE+CFEELALKI+EVPSLLEEG
Sbjct: 126 GNKVDRESERGVSREEGIALAKELNCMFLECSARTRQNVEQCFEELALKIMEVPSLLEEG 185

Query: 277 SSVGKRNILKQKQENHPTPSRGCCS 203
           SS  KRNILKQK E+      GCCS
Sbjct: 186 SSAVKRNILKQKPEHQTNTQSGCCS 210


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