BLASTX nr result

ID: Dioscorea21_contig00019930 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00019930
         (347 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAM91874.1| putative copia-like polyprotein [Oryza sativa Jap...   219   2e-55
gb|ABA95797.1| retrotransposon protein, putative, unclassified [...   218   4e-55
emb|CAH67874.1| OSIGBa0153E02-OSIGBa0093I20.3 [Oryza sativa Indi...   218   5e-55
emb|CAE05707.2| OSJNBb0065J09.3 [Oryza sativa Japonica Group]         218   5e-55
emb|CAE75905.1| OSJNBa0088I22.18 [Oryza sativa Japonica Group]        218   5e-55

>gb|AAM91874.1| putative copia-like polyprotein [Oryza sativa Japonica Group]
          Length = 894

 Score =  219 bits (558), Expect = 2e-55
 Identities = 102/114 (89%), Positives = 109/114 (95%)
 Frame = -3

Query: 342 IDRYKARLVAKGYSQTYGLDYDETFAPVAKMSTVRMLVSCAANFNWPLHQLDVKNAFLHG 163
           ++RYKARLVAKGYSQTYG+DYDETFAPVAKMSTVR L+SCAANF+WPLHQLDVKNAFLHG
Sbjct: 442 VERYKARLVAKGYSQTYGIDYDETFAPVAKMSTVRTLISCAANFDWPLHQLDVKNAFLHG 501

Query: 162 DLQEEVYMEIPPGFATSQVAGKVCKLKKSLYGLKQSPRAWFDRFRLAVCGMGYK 1
           DLQEEVYMEIPPGFATSQ  GKV +LKKSLYGLKQSPRAWFDRFR A+CGMGYK
Sbjct: 502 DLQEEVYMEIPPGFATSQTEGKVLRLKKSLYGLKQSPRAWFDRFRRAMCGMGYK 555


>gb|ABA95797.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1588

 Score =  218 bits (555), Expect = 4e-55
 Identities = 100/114 (87%), Positives = 106/114 (92%)
 Frame = -3

Query: 345  KIDRYKARLVAKGYSQTYGLDYDETFAPVAKMSTVRMLVSCAANFNWPLHQLDVKNAFLH 166
            K+DRYKARLVAKGYSQTYG+DYDETFAPVAKMSTVR+L+SCA NF WPLHQLDVKNAFLH
Sbjct: 1135 KVDRYKARLVAKGYSQTYGIDYDETFAPVAKMSTVRILISCAVNFGWPLHQLDVKNAFLH 1194

Query: 165  GDLQEEVYMEIPPGFATSQVAGKVCKLKKSLYGLKQSPRAWFDRFRLAVCGMGY 4
            GDLQEEVYMEIPPGF  SQ  GKVC+LKKSLYGLKQSPRAWFDRFR A+C MGY
Sbjct: 1195 GDLQEEVYMEIPPGFGNSQTVGKVCRLKKSLYGLKQSPRAWFDRFRRALCNMGY 1248


>emb|CAH67874.1| OSIGBa0153E02-OSIGBa0093I20.3 [Oryza sativa Indica Group]
          Length = 806

 Score =  218 bits (554), Expect = 5e-55
 Identities = 101/115 (87%), Positives = 110/115 (95%)
 Frame = -3

Query: 345 KIDRYKARLVAKGYSQTYGLDYDETFAPVAKMSTVRMLVSCAANFNWPLHQLDVKNAFLH 166
           K++RYKARLVAKGYSQTYG+DYDETFAPVAKMSTVR L+SCAANF+WPL+QLDVKNAFLH
Sbjct: 353 KVERYKARLVAKGYSQTYGIDYDETFAPVAKMSTVRTLISCAANFDWPLYQLDVKNAFLH 412

Query: 165 GDLQEEVYMEIPPGFATSQVAGKVCKLKKSLYGLKQSPRAWFDRFRLAVCGMGYK 1
           GDLQEEVYMEIPPGF+TSQ  GKV +LKKSLYGLKQSPRAWFDRFR A+CGMGYK
Sbjct: 413 GDLQEEVYMEIPPGFSTSQTKGKVLRLKKSLYGLKQSPRAWFDRFRRAMCGMGYK 467


>emb|CAE05707.2| OSJNBb0065J09.3 [Oryza sativa Japonica Group]
          Length = 1015

 Score =  218 bits (554), Expect = 5e-55
 Identities = 101/115 (87%), Positives = 110/115 (95%)
 Frame = -3

Query: 345 KIDRYKARLVAKGYSQTYGLDYDETFAPVAKMSTVRMLVSCAANFNWPLHQLDVKNAFLH 166
           K++RYKARLVAKGYSQTYG+DYDETFAPVAKMSTVR L+SCAANF+WPL+QLDVKNAFLH
Sbjct: 544 KVERYKARLVAKGYSQTYGIDYDETFAPVAKMSTVRTLISCAANFDWPLYQLDVKNAFLH 603

Query: 165 GDLQEEVYMEIPPGFATSQVAGKVCKLKKSLYGLKQSPRAWFDRFRLAVCGMGYK 1
           GDLQEEVYMEIPPGF+TSQ  GKV +LKKSLYGLKQSPRAWFDRFR A+CGMGYK
Sbjct: 604 GDLQEEVYMEIPPGFSTSQTKGKVLRLKKSLYGLKQSPRAWFDRFRRAMCGMGYK 658


>emb|CAE75905.1| OSJNBa0088I22.18 [Oryza sativa Japonica Group]
          Length = 624

 Score =  218 bits (554), Expect = 5e-55
 Identities = 101/114 (88%), Positives = 109/114 (95%)
 Frame = -3

Query: 342 IDRYKARLVAKGYSQTYGLDYDETFAPVAKMSTVRMLVSCAANFNWPLHQLDVKNAFLHG 163
           ++RYKARLVAKGYSQTYG+DYDETFAPVAK+STVR L+SCAANF+WPLHQLDVKNAFLHG
Sbjct: 437 VERYKARLVAKGYSQTYGIDYDETFAPVAKISTVRTLISCAANFDWPLHQLDVKNAFLHG 496

Query: 162 DLQEEVYMEIPPGFATSQVAGKVCKLKKSLYGLKQSPRAWFDRFRLAVCGMGYK 1
           DLQEEVYMEIPPGFATSQ  GKV +LKKSLYGLKQSPRAWFDRFR A+CGMGYK
Sbjct: 497 DLQEEVYMEIPPGFATSQTEGKVLRLKKSLYGLKQSPRAWFDRFRRAMCGMGYK 550


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