BLASTX nr result

ID: Dioscorea21_contig00019919 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00019919
         (208 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317238.1| predicted protein [Populus trichocarpa] gi|2...   107   8e-22
ref|NP_680734.1| endonuclease 4 [Arabidopsis thaliana] gi|391359...   107   1e-21
emb|CBI18600.3| unnamed protein product [Vitis vinifera]              107   1e-21
ref|XP_002269258.1| PREDICTED: nuclease S1 [Vitis vinifera]           107   1e-21
ref|XP_002869881.1| hypothetical protein ARALYDRAFT_492719 [Arab...   106   2e-21

>ref|XP_002317238.1| predicted protein [Populus trichocarpa] gi|222860303|gb|EEE97850.1|
           predicted protein [Populus trichocarpa]
          Length = 297

 Score =  107 bits (268), Expect = 8e-22
 Identities = 48/70 (68%), Positives = 57/70 (81%), Gaps = 1/70 (1%)
 Frame = -1

Query: 208 RCNYDYCRDCHDFARSRNRCVTGAIYNYSAQL-STYKNSKFTDQYNLTEALLFLSHFVGD 32
           RCNY+Y RDCHD +  ++RCVTGAIYNY+ QL S Y+NS     YNLTEAL+FLSHF+GD
Sbjct: 90  RCNYEYFRDCHDSSGRKDRCVTGAIYNYTNQLLSLYQNSNSESNYNLTEALMFLSHFIGD 149

Query: 31  IHQPLHCGFL 2
           +HQPLH GFL
Sbjct: 150 VHQPLHVGFL 159


>ref|NP_680734.1| endonuclease 4 [Arabidopsis thaliana]
           gi|391359266|sp|F4JJL0.1|ENDO4_ARATH RecName:
           Full=Endonuclease 4; Short=AtENDO4; AltName:
           Full=Deoxyribonuclease ENDO4; AltName:
           Full=Single-stranded-nucleate endonuclease ENDO4; Flags:
           Precursor gi|332659076|gb|AEE84476.1| endonuclease 4
           [Arabidopsis thaliana]
          Length = 299

 Score =  107 bits (267), Expect = 1e-21
 Identities = 48/70 (68%), Positives = 58/70 (82%), Gaps = 1/70 (1%)
 Frame = -1

Query: 208 RCNYDYCRDCHDFARSRNRCVTGAIYNYSAQL-STYKNSKFTDQYNLTEALLFLSHFVGD 32
           RCNY+YCRDCHD  ++++RCVTGAI+NY+ QL S  +NS     YNLTEAL+FLSHF+GD
Sbjct: 92  RCNYEYCRDCHDTHKNQDRCVTGAIFNYTMQLMSASENSDTIVHYNLTEALMFLSHFIGD 151

Query: 31  IHQPLHCGFL 2
           IHQPLH GFL
Sbjct: 152 IHQPLHVGFL 161


>emb|CBI18600.3| unnamed protein product [Vitis vinifera]
          Length = 332

 Score =  107 bits (267), Expect = 1e-21
 Identities = 48/69 (69%), Positives = 56/69 (81%), Gaps = 1/69 (1%)
 Frame = -1

Query: 208 RCNYDYCRDCHDFARSRNRCVTGAIYNYSAQL-STYKNSKFTDQYNLTEALLFLSHFVGD 32
           RCNY+YCRDCHDF   ++ CVTGAIYNY+ QL S Y NS    +YNLTEAL+FLSHF+GD
Sbjct: 92  RCNYEYCRDCHDFRGHKDICVTGAIYNYTKQLTSGYHNSGSEIRYNLTEALMFLSHFIGD 151

Query: 31  IHQPLHCGF 5
           +HQPLH GF
Sbjct: 152 VHQPLHVGF 160


>ref|XP_002269258.1| PREDICTED: nuclease S1 [Vitis vinifera]
          Length = 323

 Score =  107 bits (267), Expect = 1e-21
 Identities = 48/69 (69%), Positives = 56/69 (81%), Gaps = 1/69 (1%)
 Frame = -1

Query: 208 RCNYDYCRDCHDFARSRNRCVTGAIYNYSAQL-STYKNSKFTDQYNLTEALLFLSHFVGD 32
           RCNY+YCRDCHDF   ++ CVTGAIYNY+ QL S Y NS    +YNLTEAL+FLSHF+GD
Sbjct: 92  RCNYEYCRDCHDFRGHKDICVTGAIYNYTKQLTSGYHNSGSEIRYNLTEALMFLSHFIGD 151

Query: 31  IHQPLHCGF 5
           +HQPLH GF
Sbjct: 152 VHQPLHVGF 160


>ref|XP_002869881.1| hypothetical protein ARALYDRAFT_492719 [Arabidopsis lyrata subsp.
           lyrata] gi|297315717|gb|EFH46140.1| hypothetical protein
           ARALYDRAFT_492719 [Arabidopsis lyrata subsp. lyrata]
          Length = 299

 Score =  106 bits (265), Expect = 2e-21
 Identities = 48/70 (68%), Positives = 57/70 (81%), Gaps = 1/70 (1%)
 Frame = -1

Query: 208 RCNYDYCRDCHDFARSRNRCVTGAIYNYSAQL-STYKNSKFTDQYNLTEALLFLSHFVGD 32
           RCNY+YCRDCHD  + ++RCVTGAI+NY+ QL S  +NS     YNLTEAL+FLSHF+GD
Sbjct: 92  RCNYEYCRDCHDTHKHQDRCVTGAIFNYTMQLMSASENSHTIVHYNLTEALMFLSHFIGD 151

Query: 31  IHQPLHCGFL 2
           IHQPLH GFL
Sbjct: 152 IHQPLHVGFL 161


Top