BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00019902
         (226 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274648.1| PREDICTED: KH domain-containing protein At5g...    97   1e-18
ref|XP_002532938.1| nucleic acid binding protein, putative [Rici...    97   1e-18
ref|XP_002454368.1| hypothetical protein SORBIDRAFT_04g029520 [S...    87   1e-15
ref|XP_002299073.1| predicted protein [Populus trichocarpa] gi|2...    86   2e-15
ref|NP_200425.1| RNA-binding KH domain-containing protein [Arabi...    86   3e-15

>ref|XP_002274648.1| PREDICTED: KH domain-containing protein At5g56140 isoform 1 [Vitis
           vinifera] gi|296089986|emb|CBI39805.3| unnamed protein
           product [Vitis vinifera]
          Length = 287

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 48/55 (87%), Positives = 51/55 (92%)
 Frame = -1

Query: 166 GIRSASSALAEQEKYLSELLAERHKLGPFTSVLPHSYRLLNQEILRITTLLGNAS 2
           G+RSA+SAL EQEKYLSELLAERHKL PF  VLPHSYRLLNQEILR+TTLLGNAS
Sbjct: 24  GLRSATSALVEQEKYLSELLAERHKLSPFMPVLPHSYRLLNQEILRVTTLLGNAS 78


>ref|XP_002532938.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223527289|gb|EEF29442.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 300

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 51/74 (68%), Positives = 56/74 (75%)
 Frame = -1

Query: 223 GRYMXXXXXXXXXXXXXXSGIRSASSALAEQEKYLSELLAERHKLGPFTSVLPHSYRLLN 44
           GR+M              SG+RSASSAL EQEKYLSELLAERHKL PF  VLPH+YRLL+
Sbjct: 15  GRFMAYSPSPSAPHSPHLSGLRSASSALVEQEKYLSELLAERHKLSPFMPVLPHTYRLLS 74

Query: 43  QEILRITTLLGNAS 2
           QEILR+TTLLGNAS
Sbjct: 75  QEILRVTTLLGNAS 88


>ref|XP_002454368.1| hypothetical protein SORBIDRAFT_04g029520 [Sorghum bicolor]
           gi|241934199|gb|EES07344.1| hypothetical protein
           SORBIDRAFT_04g029520 [Sorghum bicolor]
          Length = 286

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 42/55 (76%), Positives = 50/55 (90%)
 Frame = -1

Query: 166 GIRSASSALAEQEKYLSELLAERHKLGPFTSVLPHSYRLLNQEILRITTLLGNAS 2
           G+R+ S+A+AEQEKYL+ELLAERHKLGPF  V+PHS RLLNQEILR++TLL NAS
Sbjct: 24  GLRTPSAAVAEQEKYLAELLAERHKLGPFIPVIPHSVRLLNQEILRVSTLLENAS 78


>ref|XP_002299073.1| predicted protein [Populus trichocarpa] gi|222846331|gb|EEE83878.1|
           predicted protein [Populus trichocarpa]
          Length = 302

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 50/78 (64%), Positives = 57/78 (73%), Gaps = 3/78 (3%)
 Frame = -1

Query: 226 SGRYMXXXXXXXXXXXXXXSGIRS--ASSALA-EQEKYLSELLAERHKLGPFTSVLPHSY 56
           +GR+M              SG+RS  ASSAL  EQEKYLSELLAERHK+ PF  VLP++Y
Sbjct: 13  AGRFMAYSPSPSAPHSPHISGLRSSAASSALVVEQEKYLSELLAERHKISPFLPVLPNTY 72

Query: 55  RLLNQEILRITTLLGNAS 2
           RLLNQEILR+TTLLGNAS
Sbjct: 73  RLLNQEILRVTTLLGNAS 90


>ref|NP_200425.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
           gi|75262628|sp|Q9FKT4.1|QKIL2_ARATH RecName: Full=KH
           domain-containing protein At5g56140; AltName:
           Full=Quaking-like protein 2 gi|9758634|dbj|BAB09296.1|
           RNA-binding protein-like [Arabidopsis thaliana]
           gi|24030184|gb|AAN41273.1| putative RNA-binding protein
           [Arabidopsis thaliana] gi|332009342|gb|AED96725.1|
           RNA-binding KH domain-containing protein [Arabidopsis
           thaliana]
          Length = 315

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 42/55 (76%), Positives = 47/55 (85%)
 Frame = -1

Query: 166 GIRSASSALAEQEKYLSELLAERHKLGPFTSVLPHSYRLLNQEILRITTLLGNAS 2
           G+RS SS   EQEKYLSELLAERHKL PF  VLPH++RLLNQEILR+TTLL NA+
Sbjct: 51  GLRSQSSVFVEQEKYLSELLAERHKLTPFLPVLPHAFRLLNQEILRVTTLLENAT 105