BLASTX nr result

ID: Dioscorea21_contig00019893 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00019893
         (315 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004159946.1| PREDICTED: LOW QUALITY PROTEIN: tyrosine--tR...    65   4e-09
ref|XP_004143904.1| PREDICTED: tyrosine--tRNA ligase-like [Cucum...    65   4e-09
ref|XP_002310952.1| predicted protein [Populus trichocarpa] gi|2...    64   1e-08
ref|NP_174157.4| nucleotidyl transferase domain-containing prote...    64   2e-08
ref|XP_002890770.1| ATP binding protein [Arabidopsis lyrata subs...    63   2e-08

>ref|XP_004159946.1| PREDICTED: LOW QUALITY PROTEIN: tyrosine--tRNA ligase-like [Cucumis
           sativus]
          Length = 387

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 31/40 (77%), Positives = 35/40 (87%)
 Frame = +1

Query: 1   VKPALSKALNLILQPVRDHFKNNKEAKELLKAVKGYRVTR 120
           +KPALSKALN IL+PVRDHFKN+  AK+LLK VK YRVTR
Sbjct: 348 LKPALSKALNKILEPVRDHFKNDSNAKDLLKRVKAYRVTR 387


>ref|XP_004143904.1| PREDICTED: tyrosine--tRNA ligase-like [Cucumis sativus]
          Length = 387

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 31/40 (77%), Positives = 35/40 (87%)
 Frame = +1

Query: 1   VKPALSKALNLILQPVRDHFKNNKEAKELLKAVKGYRVTR 120
           +KPALSKALN IL+PVRDHFKN+  AK+LLK VK YRVTR
Sbjct: 348 LKPALSKALNKILEPVRDHFKNDSNAKDLLKRVKAYRVTR 387


>ref|XP_002310952.1| predicted protein [Populus trichocarpa] gi|222850772|gb|EEE88319.1|
           predicted protein [Populus trichocarpa]
          Length = 352

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 30/40 (75%), Positives = 35/40 (87%)
 Frame = +1

Query: 1   VKPALSKALNLILQPVRDHFKNNKEAKELLKAVKGYRVTR 120
           +KPAL+KALN ILQPVRDHF  + +AK+LLK VKGYRVTR
Sbjct: 313 LKPALAKALNTILQPVRDHFSKDPKAKDLLKRVKGYRVTR 352


>ref|NP_174157.4| nucleotidyl transferase domain-containing protein [Arabidopsis
           thaliana] gi|332192840|gb|AEE30961.1| nucleotidyl
           transferase domain-containing protein [Arabidopsis
           thaliana]
          Length = 748

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 31/40 (77%), Positives = 33/40 (82%)
 Frame = +1

Query: 1   VKPALSKALNLILQPVRDHFKNNKEAKELLKAVKGYRVTR 120
           +K ALSKALN ILQPVRDHFK N  AK LLK VKGY+VTR
Sbjct: 332 LKDALSKALNKILQPVRDHFKTNSRAKNLLKQVKGYKVTR 371



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 27/40 (67%), Positives = 32/40 (80%)
 Frame = +1

Query: 1   VKPALSKALNLILQPVRDHFKNNKEAKELLKAVKGYRVTR 120
           +K AL KALN+ LQPVRDHFK N+ AK LL+ VK +RVTR
Sbjct: 709 LKKALMKALNITLQPVRDHFKTNERAKNLLEQVKAFRVTR 748


>ref|XP_002890770.1| ATP binding protein [Arabidopsis lyrata subsp. lyrata]
           gi|297336612|gb|EFH67029.1| ATP binding protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 780

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 30/40 (75%), Positives = 33/40 (82%)
 Frame = +1

Query: 1   VKPALSKALNLILQPVRDHFKNNKEAKELLKAVKGYRVTR 120
           +K ALSKALN ILQPVRDHFK N  AK LLK VKGY++TR
Sbjct: 347 LKDALSKALNKILQPVRDHFKTNSRAKNLLKQVKGYKITR 386


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