BLASTX nr result

ID: Dioscorea21_contig00019865 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00019865
         (1260 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002448093.1| hypothetical protein SORBIDRAFT_06g020970 [S...   325   1e-86
ref|NP_001149112.1| LOC100282734 [Zea mays] gi|195624822|gb|ACG3...   322   1e-85
dbj|BAK05150.1| predicted protein [Hordeum vulgare subsp. vulgare]    318   1e-84
ref|NP_001053163.1| Os04g0490400 [Oryza sativa Japonica Group] g...   318   2e-84
gb|EAZ31182.1| hypothetical protein OsJ_15282 [Oryza sativa Japo...   318   2e-84

>ref|XP_002448093.1| hypothetical protein SORBIDRAFT_06g020970 [Sorghum bicolor]
           gi|241939276|gb|EES12421.1| hypothetical protein
           SORBIDRAFT_06g020970 [Sorghum bicolor]
          Length = 258

 Score =  325 bits (833), Expect = 1e-86
 Identities = 162/212 (76%), Positives = 192/212 (90%), Gaps = 1/212 (0%)
 Frame = +3

Query: 171 FFVGNRRGLAKGRKSKDEDESDTVRAVPDMGP-VKTMAQSQMDAAVVALARELSKLRTGR 347
           F   NRRG AKG+KSKD D  DTV+AVPD+GP VK+ A +QMDAAV+AL+RELSKLRTGR
Sbjct: 48  FVFENRRGFAKGKKSKD-DRGDTVQAVPDIGPTVKSAATAQMDAAVIALSRELSKLRTGR 106

Query: 348 ASAGMLDHVIVETGGVKLSLNHVAVVSVIDAQTLSVMPYDPNTLKALEQAIVSSPLGINP 527
           A+ GMLDH++VE  GVK++LN +AVVSV+DA TLSVMPYDP ++K++E AI+SSPLGINP
Sbjct: 107 ATPGMLDHIMVENAGVKVALNRIAVVSVLDAHTLSVMPYDPTSMKSIEHAIISSPLGINP 166

Query: 528 TPDGQRLIAAIPPLTKENVQALCKVVAKSAEDVKQSIRRARQKALDSIKKAASSLPKDDI 707
           TPDG R+IAAIPPLTKEN+QALCKVV KSAED KQSIRRARQKALD+IKK+ASS+PKDD+
Sbjct: 167 TPDGNRIIAAIPPLTKENIQALCKVVTKSAEDFKQSIRRARQKALDTIKKSASSMPKDDV 226

Query: 708 KRLEKEVEEMTKRFVKTADDMCKAKEKEISGS 803
           KR+EKEVEE+TK+F+K+ADDMCKAKEKEISGS
Sbjct: 227 KRIEKEVEELTKKFIKSADDMCKAKEKEISGS 258


>ref|NP_001149112.1| LOC100282734 [Zea mays] gi|195624822|gb|ACG34241.1| ribosome
           recycling factor [Zea mays] gi|238015350|gb|ACR38710.1|
           unknown [Zea mays] gi|413918761|gb|AFW58693.1| Ribosome
           recycling factor [Zea mays]
          Length = 259

 Score =  322 bits (826), Expect = 1e-85
 Identities = 159/212 (75%), Positives = 192/212 (90%), Gaps = 1/212 (0%)
 Frame = +3

Query: 171 FFVGNRRGLAKGRKSKDEDESDTVRAVPDMGP-VKTMAQSQMDAAVVALARELSKLRTGR 347
           FF  NRRG AKG+KSKD D  DTV+AVPD+GP VK+ A +QMDAAV+AL+RELSKLRTGR
Sbjct: 49  FFFENRRGFAKGKKSKD-DRGDTVQAVPDIGPTVKSAATAQMDAAVIALSRELSKLRTGR 107

Query: 348 ASAGMLDHVIVETGGVKLSLNHVAVVSVIDAQTLSVMPYDPNTLKALEQAIVSSPLGINP 527
           A+ GMLDH++VE   VK++LN +AVVSV+DA TLSVMPYDP ++K++E AI+SSPLGINP
Sbjct: 108 ATPGMLDHIMVENADVKVALNRIAVVSVLDAHTLSVMPYDPTSMKSIEHAIISSPLGINP 167

Query: 528 TPDGQRLIAAIPPLTKENVQALCKVVAKSAEDVKQSIRRARQKALDSIKKAASSLPKDDI 707
           TPDG R+IAAIPPLTKEN+QALCKVV KSAED KQSIRRARQKALD+IKK+ASS+PKDD+
Sbjct: 168 TPDGNRIIAAIPPLTKENIQALCKVVTKSAEDFKQSIRRARQKALDTIKKSASSMPKDDV 227

Query: 708 KRLEKEVEEMTKRFVKTADDMCKAKEKEISGS 803
           KR+EKE+EE+TK+F+K++DDMCKAKEKEISG+
Sbjct: 228 KRIEKEIEELTKKFIKSSDDMCKAKEKEISGN 259


>dbj|BAK05150.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 260

 Score =  318 bits (816), Expect = 1e-84
 Identities = 158/212 (74%), Positives = 188/212 (88%), Gaps = 1/212 (0%)
 Frame = +3

Query: 171 FFVGNRRGLAKGRKSKDEDESDTVRAVPDMGP-VKTMAQSQMDAAVVALARELSKLRTGR 347
           F +  RRG AKG+KSK++   DTV A PD+GP VK+ A +QMD AVVAL+RELSKLRTGR
Sbjct: 49  FLLEIRRGFAKGKKSKNDSRGDTVEAAPDIGPTVKSAATAQMDTAVVALSRELSKLRTGR 108

Query: 348 ASAGMLDHVIVETGGVKLSLNHVAVVSVIDAQTLSVMPYDPNTLKALEQAIVSSPLGINP 527
           AS GMLDH++VETG VK+ L+ +AVVSV+D+ TLSVMPYDPNT+K++E AI SSPLGINP
Sbjct: 109 ASPGMLDHIMVETGDVKVGLSRIAVVSVLDSHTLSVMPYDPNTMKSIENAIASSPLGINP 168

Query: 528 TPDGQRLIAAIPPLTKENVQALCKVVAKSAEDVKQSIRRARQKALDSIKKAASSLPKDDI 707
           TPDG R+IAA+PPLTKE +QA+CKVV KSAED KQSIRRARQKALD+IKK++SS+PKDDI
Sbjct: 169 TPDGSRIIAAVPPLTKETMQAMCKVVTKSAEDFKQSIRRARQKALDTIKKSSSSMPKDDI 228

Query: 708 KRLEKEVEEMTKRFVKTADDMCKAKEKEISGS 803
           KRLEKEVEE+TK+F+K+ADDMCKAKEKEISGS
Sbjct: 229 KRLEKEVEELTKKFIKSADDMCKAKEKEISGS 260


>ref|NP_001053163.1| Os04g0490400 [Oryza sativa Japonica Group]
           gi|21740669|emb|CAD41132.1| OSJNBa0084K20.10 [Oryza
           sativa Japonica Group] gi|38347444|emb|CAE02486.2|
           OSJNBa0076N16.8 [Oryza sativa Japonica Group]
           gi|113564734|dbj|BAF15077.1| Os04g0490400 [Oryza sativa
           Japonica Group] gi|125548818|gb|EAY94640.1| hypothetical
           protein OsI_16419 [Oryza sativa Indica Group]
           gi|215704152|dbj|BAG92992.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 260

 Score =  318 bits (815), Expect = 2e-84
 Identities = 158/212 (74%), Positives = 189/212 (89%), Gaps = 1/212 (0%)
 Frame = +3

Query: 171 FFVGNRRGLAKGRKSKDEDESDTVRAVPDMGP-VKTMAQSQMDAAVVALARELSKLRTGR 347
           F +  RRG AKG+KSKD+   DTV+  PD+GP VK+ A  QM+AAVVAL+RELSKLRTGR
Sbjct: 49  FLLEARRGFAKGKKSKDDGRGDTVQDAPDIGPTVKSAATQQMEAAVVALSRELSKLRTGR 108

Query: 348 ASAGMLDHVIVETGGVKLSLNHVAVVSVIDAQTLSVMPYDPNTLKALEQAIVSSPLGINP 527
           AS GMLDH++VET GVK++LN +AVVSV+DA TLSVMPYDP+++K++E AI+SSPLGINP
Sbjct: 109 ASPGMLDHIMVETTGVKVALNRLAVVSVLDAHTLSVMPYDPSSMKSIEHAIISSPLGINP 168

Query: 528 TPDGQRLIAAIPPLTKENVQALCKVVAKSAEDVKQSIRRARQKALDSIKKAASSLPKDDI 707
           TPDG R+IA IPPLTKEN+QALCKVV KSAED KQSIRRARQKALD+IKK+AS +PKDD+
Sbjct: 169 TPDGNRIIANIPPLTKENIQALCKVVTKSAEDFKQSIRRARQKALDTIKKSASGMPKDDV 228

Query: 708 KRLEKEVEEMTKRFVKTADDMCKAKEKEISGS 803
           KRLEKEVEE+TK+F+K+ADDMCKAKEKEISG+
Sbjct: 229 KRLEKEVEELTKKFIKSADDMCKAKEKEISGN 260


>gb|EAZ31182.1| hypothetical protein OsJ_15282 [Oryza sativa Japonica Group]
          Length = 260

 Score =  318 bits (815), Expect = 2e-84
 Identities = 158/212 (74%), Positives = 189/212 (89%), Gaps = 1/212 (0%)
 Frame = +3

Query: 171 FFVGNRRGLAKGRKSKDEDESDTVRAVPDMGP-VKTMAQSQMDAAVVALARELSKLRTGR 347
           F +  RRG AKG+KSKD+   DTV+  PD+GP VK+ A  QM+AAVVAL+RELSKLRTGR
Sbjct: 49  FLLEARRGFAKGKKSKDDGRGDTVQDAPDIGPTVKSAATQQMEAAVVALSRELSKLRTGR 108

Query: 348 ASAGMLDHVIVETGGVKLSLNHVAVVSVIDAQTLSVMPYDPNTLKALEQAIVSSPLGINP 527
           AS GMLDH++VET GVK++LN +AVVSV+DA TLSVMPYDP+++K++E AI+SSPLGINP
Sbjct: 109 ASPGMLDHIMVETTGVKVALNRLAVVSVLDAHTLSVMPYDPSSMKSIEHAIISSPLGINP 168

Query: 528 TPDGQRLIAAIPPLTKENVQALCKVVAKSAEDVKQSIRRARQKALDSIKKAASSLPKDDI 707
           TPDG R+IA IPPLTKEN+QALCKVV KSAED KQSIRRARQKALD+IKK+AS +PKDD+
Sbjct: 169 TPDGNRIIANIPPLTKENIQALCKVVTKSAEDFKQSIRRARQKALDTIKKSASGMPKDDV 228

Query: 708 KRLEKEVEEMTKRFVKTADDMCKAKEKEISGS 803
           KRLEKEVEE+TK+F+K+ADDMCKAKEKEISG+
Sbjct: 229 KRLEKEVEELTKKFIKSADDMCKAKEKEISGN 260


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