BLASTX nr result

ID: Dioscorea21_contig00019858 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00019858
         (206 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002863846.1| small molecular weight G-protein 1 [Arabidop...   132   3e-29
ref|NP_199607.1| RAB GTPase homolog A4C [Arabidopsis thaliana] g...   132   3e-29
sp|P25766.2|RGP1_ORYSJ RecName: Full=Ras-related protein RGP1; A...   132   4e-29
gb|EEC84249.1| hypothetical protein OsI_30694 [Oryza sativa Indi...   132   4e-29
emb|CAA41966.1| GTP-binding protein [Oryza sativa] gi|228209|prf...   132   4e-29

>ref|XP_002863846.1| small molecular weight G-protein 1 [Arabidopsis lyrata subsp.
           lyrata] gi|297309681|gb|EFH40105.1| small molecular
           weight G-protein 1 [Arabidopsis lyrata subsp. lyrata]
          Length = 223

 Score =  132 bits (332), Expect = 3e-29
 Identities = 64/68 (94%), Positives = 67/68 (98%)
 Frame = +1

Query: 1   VYDITKRQSFDHVARWLDELRSHADKNIVIMLIGNKSDLGTLRAVPTEDAKEFAQRENLF 180
           VYDITKRQSFDHVARWL+ELR HADKNIVIMLIGNK+DLGTLRAVPTEDAKEFAQRENLF
Sbjct: 94  VYDITKRQSFDHVARWLEELRGHADKNIVIMLIGNKTDLGTLRAVPTEDAKEFAQRENLF 153

Query: 181 FMETSALE 204
           FMETSAL+
Sbjct: 154 FMETSALD 161


>ref|NP_199607.1| RAB GTPase homolog A4C [Arabidopsis thaliana]
           gi|75333691|sp|Q9FE79.1|RAA4C_ARATH RecName:
           Full=Ras-related protein RABA4c; Short=AtRABA4c;
           AltName: Full=Ras-related protein SMG1
           gi|12004623|gb|AAG44121.1|AF218121_1 small molecular
           weight g-protein [Arabidopsis thaliana]
           gi|9758522|dbj|BAB09048.1| RAS superfamily GTP-binding
           protein-like [Arabidopsis thaliana]
           gi|89111906|gb|ABD60725.1| At5g47960 [Arabidopsis
           thaliana] gi|332008216|gb|AED95599.1| RAB GTPase homolog
           A4C [Arabidopsis thaliana]
          Length = 223

 Score =  132 bits (332), Expect = 3e-29
 Identities = 64/68 (94%), Positives = 67/68 (98%)
 Frame = +1

Query: 1   VYDITKRQSFDHVARWLDELRSHADKNIVIMLIGNKSDLGTLRAVPTEDAKEFAQRENLF 180
           VYDITKRQSFDHVARWL+ELR HADKNIVIMLIGNK+DLGTLRAVPTEDAKEFAQRENLF
Sbjct: 94  VYDITKRQSFDHVARWLEELRGHADKNIVIMLIGNKTDLGTLRAVPTEDAKEFAQRENLF 153

Query: 181 FMETSALE 204
           FMETSAL+
Sbjct: 154 FMETSALD 161


>sp|P25766.2|RGP1_ORYSJ RecName: Full=Ras-related protein RGP1; AltName: Full=GTP-binding
           regulatory protein RGP1 gi|50251643|dbj|BAD29646.1|
           putative ras-related GTP-binding protein [Oryza sativa
           Japonica Group] gi|222641214|gb|EEE69346.1| hypothetical
           protein OsJ_28668 [Oryza sativa Japonica Group]
          Length = 226

 Score =  132 bits (331), Expect = 4e-29
 Identities = 64/68 (94%), Positives = 66/68 (97%)
 Frame = +1

Query: 1   VYDITKRQSFDHVARWLDELRSHADKNIVIMLIGNKSDLGTLRAVPTEDAKEFAQRENLF 180
           VYDITKRQSFDHVARWL+ELR HADKNIVIMLIGNKSDLGTLR VPTEDAKEFA+RENLF
Sbjct: 97  VYDITKRQSFDHVARWLEELRGHADKNIVIMLIGNKSDLGTLRVVPTEDAKEFAERENLF 156

Query: 181 FMETSALE 204
           FMETSALE
Sbjct: 157 FMETSALE 164


>gb|EEC84249.1| hypothetical protein OsI_30694 [Oryza sativa Indica Group]
          Length = 214

 Score =  132 bits (331), Expect = 4e-29
 Identities = 64/68 (94%), Positives = 66/68 (97%)
 Frame = +1

Query: 1   VYDITKRQSFDHVARWLDELRSHADKNIVIMLIGNKSDLGTLRAVPTEDAKEFAQRENLF 180
           VYDITKRQSFDHVARWL+ELR HADKNIVIMLIGNKSDLGTLR VPTEDAKEFA+RENLF
Sbjct: 85  VYDITKRQSFDHVARWLEELRGHADKNIVIMLIGNKSDLGTLRVVPTEDAKEFAERENLF 144

Query: 181 FMETSALE 204
           FMETSALE
Sbjct: 145 FMETSALE 152


>emb|CAA41966.1| GTP-binding protein [Oryza sativa] gi|228209|prf||1718315A
           GTP-binding protein
          Length = 226

 Score =  132 bits (331), Expect = 4e-29
 Identities = 64/68 (94%), Positives = 66/68 (97%)
 Frame = +1

Query: 1   VYDITKRQSFDHVARWLDELRSHADKNIVIMLIGNKSDLGTLRAVPTEDAKEFAQRENLF 180
           VYDITKRQSFDHVARWL+ELR HADKNIVIMLIGNKSDLGTLR VPTEDAKEFA+RENLF
Sbjct: 97  VYDITKRQSFDHVARWLEELRGHADKNIVIMLIGNKSDLGTLRVVPTEDAKEFAERENLF 156

Query: 181 FMETSALE 204
           FMETSALE
Sbjct: 157 FMETSALE 164


Top