BLASTX nr result

ID: Dioscorea21_contig00019806 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00019806
         (452 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tpg|DAA39253.1| TPA: hypothetical protein ZEAMMB73_547579 [Zea m...    74   2e-11
gb|AEJ07903.1| putative PIFa transposase [Zea mays subsp. mexicana]    74   2e-11
ref|NP_001170215.1| uncharacterized protein LOC100384166 [Zea ma...    72   6e-11
tpg|DAA40725.1| TPA: hypothetical protein ZEAMMB73_966448 [Zea m...    71   1e-10
ref|NP_001143669.1| uncharacterized protein LOC100276392 [Zea ma...    67   2e-09

>tpg|DAA39253.1| TPA: hypothetical protein ZEAMMB73_547579 [Zea mays]
          Length = 261

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 40/100 (40%), Positives = 60/100 (60%), Gaps = 2/100 (2%)
 Frame = -2

Query: 295 VRWSDDMDQALIDTLLEVVLAGPRRTENGFKSDECTKVVKKVLERCQVVVGVAHVRARLK 116
           V W+D+MD+ L+DT ++    G R  +NG+KS   T VVK V E+C V +   ++ +R K
Sbjct: 12  VPWNDEMDKVLLDTFVDYYNKGDR-CQNGWKSHVYTAVVKNVCEKCNVTITKENISSRSK 70

Query: 115 TFKTEYKEITELLKTSGFGLD-ENGRVTAD-PLVWEKHLQ 2
           TF   Y  I  LL TSGFG D E  ++  D   VW+++++
Sbjct: 71  TFDKHYNIINGLLSTSGFGWDWEKNKLKVDSDTVWDEYIE 110


>gb|AEJ07903.1| putative PIFa transposase [Zea mays subsp. mexicana]
          Length = 558

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 46/129 (35%), Positives = 72/129 (55%), Gaps = 2/129 (1%)
 Frame = -2

Query: 382 RAATVSSSSAHDVEEISPTSSQVEIKKRQVRWSDDMDQALIDTLLEVVLAGPRRTENGFK 203
           R A + +SS  D+E      +Q +  +  V W+D+MD+ L+DT ++    G R  +NG+K
Sbjct: 286 RWAILRTSSYFDLE------NQDKKTRGYVPWNDEMDKVLLDTFVDYYNKGDR-CQNGWK 338

Query: 202 SDECTKVVKKVLERCQVVVGVAHVRARLKTFKTEYKEITELLKTSGFGLD-ENGRVTAD- 29
           S   T  VK V E+C V +   ++ +R KTF   Y  I  LL TSGFG D E  ++  D 
Sbjct: 339 SHVYTAAVKNVCEKCNVTITKENISSRSKTFDKHYNIINGLLSTSGFGWDWEKNKLKVDS 398

Query: 28  PLVWEKHLQ 2
             VW+++++
Sbjct: 399 DTVWDEYVE 407


>ref|NP_001170215.1| uncharacterized protein LOC100384166 [Zea mays]
           gi|224034399|gb|ACN36275.1| unknown [Zea mays]
          Length = 261

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 39/100 (39%), Positives = 59/100 (59%), Gaps = 2/100 (2%)
 Frame = -2

Query: 295 VRWSDDMDQALIDTLLEVVLAGPRRTENGFKSDECTKVVKKVLERCQVVVGVAHVRARLK 116
           V W+D+MD+ L+DT ++    G R  +NG+KS   T  VK V E+C V +   ++ +R K
Sbjct: 12  VPWNDEMDKVLLDTFVDYYNKGDR-CQNGWKSHVYTAAVKNVCEKCNVTITKENISSRSK 70

Query: 115 TFKTEYKEITELLKTSGFGLD-ENGRVTAD-PLVWEKHLQ 2
           TF   Y  I  LL TSGFG D E  ++  D   VW+++++
Sbjct: 71  TFDKHYNIINGLLSTSGFGWDWEKNKLKVDSDTVWDEYVE 110


>tpg|DAA40725.1| TPA: hypothetical protein ZEAMMB73_966448 [Zea mays]
          Length = 206

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 39/99 (39%), Positives = 60/99 (60%), Gaps = 2/99 (2%)
 Frame = -2

Query: 295 VRWSDDMDQALIDTLLEVVLAGPRRTENGFKSDECTKVVKKVLERCQVVVGVAHVRARLK 116
           + W+DDMD+AL+DT +E    G R  +NG+KS   T  +K V E+C V +   ++ +R K
Sbjct: 14  ISWNDDMDKALLDTFVEYYNKGDR-CQNGWKSHVYTAAIKNVREKCNVEITKDNIMSRNK 72

Query: 115 TFKTEYKEITELLKTSGFGLDEN-GRVTAD-PLVWEKHL 5
           TF   +  I  +L+TSGFG D N  +++ D   VWE ++
Sbjct: 73  TFDKHHTIINGMLETSGFGWDWNKNKISVDSDSVWEAYV 111


>ref|NP_001143669.1| uncharacterized protein LOC100276392 [Zea mays]
           gi|195624140|gb|ACG33900.1| hypothetical protein [Zea
           mays]
          Length = 225

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 37/100 (37%), Positives = 57/100 (57%), Gaps = 2/100 (2%)
 Frame = -2

Query: 295 VRWSDDMDQALIDTLLEVVLAGPRRTENGFKSDECTKVVKKVLERCQVVVGVAHVRARLK 116
           V W+D+MD+ L+DT ++      R  +NG+KS   T  VK V E+C V +   ++ +R K
Sbjct: 12  VPWNDEMDKVLLDTFVDYYNKSDR-CQNGWKSHVYTVAVKNVCEKCNVTITKENISSRSK 70

Query: 115 TFKTEYKEITELLKTSGFGLD-ENGRVTAD-PLVWEKHLQ 2
            F   Y  I  LL TSGFG D E  ++  D   VW+++++
Sbjct: 71  NFDKHYNIINGLLSTSGFGWDWEKNKLKVDSDTVWDEYVE 110


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