BLASTX nr result

ID: Dioscorea21_contig00019758 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00019758
         (763 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EAZ35668.1| hypothetical protein OsJ_19954 [Oryza sativa Japo...   279   5e-73
dbj|BAA90805.1| pentatricopeptide (PPR) repeat-containing protei...   279   5e-73
gb|AFW86094.1| hypothetical protein ZEAMMB73_140838 [Zea mays]        276   3e-72
ref|XP_003633947.1| PREDICTED: pentatricopeptide repeat-containi...   275   1e-71
ref|XP_003548250.1| PREDICTED: pentatricopeptide repeat-containi...   272   7e-71

>gb|EAZ35668.1| hypothetical protein OsJ_19954 [Oryza sativa Japonica Group]
          Length = 510

 Score =  279 bits (713), Expect = 5e-73
 Identities = 131/203 (64%), Positives = 163/203 (80%)
 Frame = -2

Query: 762 AVHGSWKDALELFHDMKARRIAPDDISFVGVLMACTHGGLVEQGRTYFRSMEREFQIPPK 583
           AVHG W++AL LF+ ++   + PD I+FVGV++ACTHGGLV +G+ +F SME EF + P+
Sbjct: 298 AVHGLWREALALFYKLRMAGVKPDGITFVGVILACTHGGLVNEGKLFFDSMEAEFSLKPR 357

Query: 582 LEHYGCMVDLLGRAGCLREAYDLIKSMPMKPDSVIWGALLGACSFHGEVGLAEIAAEFLS 403
           +EHYGCMVDLLGRAG L E+Y LI SMP++PD+VIWGALLGACSFHG V LAE+A + L 
Sbjct: 358 IEHYGCMVDLLGRAGLLIESYSLIASMPVEPDAVIWGALLGACSFHGNVELAELAMDKLI 417

Query: 402 ELEPWNAGNHVILSNIYASSGQWDGVAKEWKLMKWKNYRKMAGHSFIEVGGKMDKFLVED 223
            LEP N  N VILSNIYASSG+WDGVA+ WKL+K K+++K AG+SFIE+ G M KFLVED
Sbjct: 418 HLEPQNTANLVILSNIYASSGKWDGVAQVWKLLKEKDHKKSAGYSFIELDGTMHKFLVED 477

Query: 222 KSHPRAEEIYAMLNEVILAMKLL 154
           KSHPR EE+Y  LN V + MKL+
Sbjct: 478 KSHPRFEEVYNTLNSVTMTMKLV 500


>dbj|BAA90805.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group] gi|125553873|gb|EAY99478.1|
           hypothetical protein OsI_21446 [Oryza sativa Indica
           Group]
          Length = 510

 Score =  279 bits (713), Expect = 5e-73
 Identities = 131/203 (64%), Positives = 163/203 (80%)
 Frame = -2

Query: 762 AVHGSWKDALELFHDMKARRIAPDDISFVGVLMACTHGGLVEQGRTYFRSMEREFQIPPK 583
           AVHG W++AL LF+ ++   + PD I+FVGV++ACTHGGLV +G+ +F SME EF + P+
Sbjct: 298 AVHGLWREALALFYKLRMAGVKPDGITFVGVILACTHGGLVNEGKLFFDSMEAEFSLKPR 357

Query: 582 LEHYGCMVDLLGRAGCLREAYDLIKSMPMKPDSVIWGALLGACSFHGEVGLAEIAAEFLS 403
           +EHYGCMVDLLGRAG L E+Y LI SMP++PD+VIWGALLGACSFHG V LAE+A + L 
Sbjct: 358 IEHYGCMVDLLGRAGLLIESYSLIASMPVEPDAVIWGALLGACSFHGNVELAELAMDKLI 417

Query: 402 ELEPWNAGNHVILSNIYASSGQWDGVAKEWKLMKWKNYRKMAGHSFIEVGGKMDKFLVED 223
            LEP N  N VILSNIYASSG+WDGVA+ WKL+K K+++K AG+SFIE+ G M KFLVED
Sbjct: 418 HLEPQNTANLVILSNIYASSGKWDGVAQVWKLLKEKDHKKSAGYSFIELDGTMHKFLVED 477

Query: 222 KSHPRAEEIYAMLNEVILAMKLL 154
           KSHPR EE+Y  LN V + MKL+
Sbjct: 478 KSHPRFEEVYNTLNSVTMTMKLV 500


>gb|AFW86094.1| hypothetical protein ZEAMMB73_140838 [Zea mays]
          Length = 508

 Score =  276 bits (706), Expect = 3e-72
 Identities = 131/203 (64%), Positives = 161/203 (79%)
 Frame = -2

Query: 762 AVHGSWKDALELFHDMKARRIAPDDISFVGVLMACTHGGLVEQGRTYFRSMEREFQIPPK 583
           AVHG W +AL LFH ++     PD I+FVGV++ACTHGGLV++G+  F SM  EF + P+
Sbjct: 297 AVHGLWTEALALFHKLRMTGAKPDGITFVGVILACTHGGLVDEGKLLFNSMRGEFGLKPR 356

Query: 582 LEHYGCMVDLLGRAGCLREAYDLIKSMPMKPDSVIWGALLGACSFHGEVGLAEIAAEFLS 403
           +EHYGCMVDLLGRAG L+EA  LI SMPM+PD+VIWGALLGACSFHG   LAEIA E L 
Sbjct: 357 IEHYGCMVDLLGRAGLLKEADSLIASMPMEPDAVIWGALLGACSFHGNFELAEIAVEKLM 416

Query: 402 ELEPWNAGNHVILSNIYASSGQWDGVAKEWKLMKWKNYRKMAGHSFIEVGGKMDKFLVED 223
            LEP N  N VILSNIYAS G+WDGVA+ WKL+K K+++K AG+SFIE+ G+M KFLVED
Sbjct: 417 HLEPHNTANLVILSNIYASCGKWDGVARVWKLLKEKDHKKSAGYSFIELDGRMHKFLVED 476

Query: 222 KSHPRAEEIYAMLNEVILAMKLL 154
           KSHPR+E++Y  L+ + LAMKL+
Sbjct: 477 KSHPRSEKVYDALDSITLAMKLV 499


>ref|XP_003633947.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g08510-like [Vitis vinifera]
          Length = 512

 Score =  275 bits (702), Expect = 1e-71
 Identities = 137/214 (64%), Positives = 166/214 (77%)
 Frame = -2

Query: 762 AVHGSWKDALELFHDMKARRIAPDDISFVGVLMACTHGGLVEQGRTYFRSMEREFQIPPK 583
           AVHG   +A+ELF+ M     APDD++FVGVL+ACTHGG+V +G+ +F SMER+F I PK
Sbjct: 293 AVHGRCDEAIELFYKMLREGAAPDDVTFVGVLLACTHGGMVVEGQHFFESMERDFSIAPK 352

Query: 582 LEHYGCMVDLLGRAGCLREAYDLIKSMPMKPDSVIWGALLGACSFHGEVGLAEIAAEFLS 403
           LEHYGCMVDLLGRAG LREA+DLI  MPM+PDSV+WG LLGACSFHG V LAE AA  L 
Sbjct: 353 LEHYGCMVDLLGRAGELREAHDLILRMPMEPDSVVWGTLLGACSFHGHVELAEKAAGALF 412

Query: 402 ELEPWNAGNHVILSNIYASSGQWDGVAKEWKLMKWKNYRKMAGHSFIEVGGKMDKFLVED 223
           ELEP N GN+VILSNIYA++G+WDGVA+  KLMK     K AG+SFIE GG + KF+VED
Sbjct: 413 ELEPSNPGNYVILSNIYATAGRWDGVARLRKLMKGGKITKAAGYSFIEEGGHIHKFIVED 472

Query: 222 KSHPRAEEIYAMLNEVILAMKLLQYFPDLDYHLE 121
           +SH R++EIYA+L+EV + MKL     D D  +E
Sbjct: 473 RSHSRSDEIYALLDEVSMKMKLHGNVNDSDSEIE 506


>ref|XP_003548250.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g08510-like [Glycine max]
          Length = 512

 Score =  272 bits (695), Expect = 7e-71
 Identities = 133/202 (65%), Positives = 158/202 (78%)
 Frame = -2

Query: 762 AVHGSWKDALELFHDMKARRIAPDDISFVGVLMACTHGGLVEQGRTYFRSMEREFQIPPK 583
           AVHG     L+L+  M     +PDD++FVG+L+ACTHGG+VE+GR  F+SM   F I PK
Sbjct: 294 AVHGECCKTLKLYDQMLGEGTSPDDVTFVGLLLACTHGGMVEKGRHIFKSMTTSFNIIPK 353

Query: 582 LEHYGCMVDLLGRAGCLREAYDLIKSMPMKPDSVIWGALLGACSFHGEVGLAEIAAEFLS 403
           LEHYGCMVDLLGRAG LREAY++I+ MPMKPDSVIWGALLGACSFH  V LAEIAAE L 
Sbjct: 354 LEHYGCMVDLLGRAGQLREAYEVIQRMPMKPDSVIWGALLGACSFHDNVELAEIAAESLF 413

Query: 402 ELEPWNAGNHVILSNIYASSGQWDGVAKEWKLMKWKNYRKMAGHSFIEVGGKMDKFLVED 223
            LEPWN GN+VILSNIYAS+GQWDGVAK  K+MK     K AGHSFIE GG++ KF+VED
Sbjct: 414 ALEPWNPGNYVILSNIYASAGQWDGVAKLRKVMKGSKITKSAGHSFIEEGGQLHKFIVED 473

Query: 222 KSHPRAEEIYAMLNEVILAMKL 157
           +SHP + EI+A+L+ V   +KL
Sbjct: 474 RSHPESNEIFALLDGVYEMIKL 495


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