BLASTX nr result

ID: Dioscorea21_contig00019594 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00019594
         (309 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002304265.1| predicted protein [Populus trichocarpa] gi|2...   135   4e-30
ref|XP_002533422.1| 50S ribosomal protein L7/L12, putative [Rici...   130   8e-29
ref|XP_003635653.1| PREDICTED: 50S ribosomal protein L7/L12-like...   130   1e-28
ref|XP_003631242.1| PREDICTED: 50S ribosomal protein L7/L12-like...   130   1e-28
ref|XP_003546827.1| PREDICTED: 50S ribosomal protein L7/L12-like...   129   2e-28

>ref|XP_002304265.1| predicted protein [Populus trichocarpa] gi|222841697|gb|EEE79244.1|
           predicted protein [Populus trichocarpa]
          Length = 216

 Score =  135 bits (339), Expect = 4e-30
 Identities = 70/90 (77%), Positives = 79/90 (87%)
 Frame = +2

Query: 5   GISPGGNEAGVTKEDKKQEKTVFELKLESFEAASKIKVIKEVRAFTDLGLKEAKEIVEKT 184
           G++     A   KE+KK EKTVFELKLESFEAASKIKVIKEVR+FTDLGLKEAK++VEKT
Sbjct: 127 GMAMKAPAAAAAKEEKKAEKTVFELKLESFEAASKIKVIKEVRSFTDLGLKEAKDLVEKT 186

Query: 185 PVVIKGGVSKEEGQQIIEKMKAVGAKVVLE 274
           P V+K GVSKEEG+QIIEKMKA+GAKVVLE
Sbjct: 187 PSVLKKGVSKEEGEQIIEKMKAIGAKVVLE 216


>ref|XP_002533422.1| 50S ribosomal protein L7/L12, putative [Ricinus communis]
           gi|223526735|gb|EEF28965.1| 50S ribosomal protein
           L7/L12, putative [Ricinus communis]
          Length = 301

 Score =  130 bits (328), Expect = 8e-29
 Identities = 65/82 (79%), Positives = 75/82 (91%)
 Frame = +2

Query: 29  AGVTKEDKKQEKTVFELKLESFEAASKIKVIKEVRAFTDLGLKEAKEIVEKTPVVIKGGV 208
           A   KE+KK EKTVFELKLES+EAASKIK+IKEVR+FTDLGLKEAK++VEKTP ++K GV
Sbjct: 220 AAAAKEEKKPEKTVFELKLESYEAASKIKIIKEVRSFTDLGLKEAKDLVEKTPSILKAGV 279

Query: 209 SKEEGQQIIEKMKAVGAKVVLE 274
           SKEE +QIIEKMKAVGAKVV+E
Sbjct: 280 SKEEAEQIIEKMKAVGAKVVME 301


>ref|XP_003635653.1| PREDICTED: 50S ribosomal protein L7/L12-like [Vitis vinifera]
          Length = 206

 Score =  130 bits (327), Expect = 1e-28
 Identities = 66/90 (73%), Positives = 80/90 (88%), Gaps = 1/90 (1%)
 Frame = +2

Query: 8   ISPGGNEAG-VTKEDKKQEKTVFELKLESFEAASKIKVIKEVRAFTDLGLKEAKEIVEKT 184
           +S GG +A    KE+KK EKTVFELKLES+EAASKIK+IKEVR+FTDLGLKEAK++VEK 
Sbjct: 117 VSGGGMKAASAAKEEKKPEKTVFELKLESYEAASKIKIIKEVRSFTDLGLKEAKDLVEKA 176

Query: 185 PVVIKGGVSKEEGQQIIEKMKAVGAKVVLE 274
           P V+K GVSKEEG+Q++EK+KA+GAKVVLE
Sbjct: 177 PSVLKAGVSKEEGEQLVEKLKALGAKVVLE 206


>ref|XP_003631242.1| PREDICTED: 50S ribosomal protein L7/L12-like [Vitis vinifera]
          Length = 206

 Score =  130 bits (327), Expect = 1e-28
 Identities = 66/90 (73%), Positives = 80/90 (88%), Gaps = 1/90 (1%)
 Frame = +2

Query: 8   ISPGGNEAG-VTKEDKKQEKTVFELKLESFEAASKIKVIKEVRAFTDLGLKEAKEIVEKT 184
           +S GG +A    KE+KK EKTVFELKLES+EAASKIK+IKEVR+FTDLGLKEAK++VEK 
Sbjct: 117 VSGGGMKAASAAKEEKKPEKTVFELKLESYEAASKIKIIKEVRSFTDLGLKEAKDLVEKA 176

Query: 185 PVVIKGGVSKEEGQQIIEKMKAVGAKVVLE 274
           P V+K GVSKEEG+Q++EK+KA+GAKVVLE
Sbjct: 177 PSVLKAGVSKEEGEQLVEKLKALGAKVVLE 206


>ref|XP_003546827.1| PREDICTED: 50S ribosomal protein L7/L12-like [Glycine max]
          Length = 217

 Score =  129 bits (324), Expect = 2e-28
 Identities = 68/92 (73%), Positives = 79/92 (85%), Gaps = 7/92 (7%)
 Frame = +2

Query: 20  GNEAGVT-------KEDKKQEKTVFELKLESFEAASKIKVIKEVRAFTDLGLKEAKEIVE 178
           GN AG+        KE++K EKTVFELKLES+EAASKIK+IKEVR FTDLGLKEAK++VE
Sbjct: 126 GNLAGMAAKAPTAAKEEQKPEKTVFELKLESYEAASKIKIIKEVRGFTDLGLKEAKDLVE 185

Query: 179 KTPVVIKGGVSKEEGQQIIEKMKAVGAKVVLE 274
           KTP VIK GVSKEEG+QIIEK+KA+GAKVV+E
Sbjct: 186 KTPAVIKKGVSKEEGEQIIEKLKALGAKVVME 217


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