BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00019590
         (423 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ99273.1| predicted protein [Hordeum vulgare subsp. vulgare]    117   8e-25
ref|NP_001051928.1| Os03g0852900 [Oryza sativa Japonica Group] g...   116   2e-24
gb|EAY92623.1| hypothetical protein OsI_14368 [Oryza sativa Indi...   116   2e-24
ref|XP_003559115.1| PREDICTED: cleavage and polyadenylation spec...   116   2e-24
ref|XP_003633408.1| PREDICTED: cleavage and polyadenylation spec...   115   5e-24

>dbj|BAJ99273.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 693

 Score =  117 bits (294), Expect = 8e-25
 Identities = 64/139 (46%), Positives = 83/139 (59%)
 Frame = -3

Query: 418 QRVSIPYSGAFGVIKHRLKQIYXXXXXXXXXXXXXXXXVHKQVTVRHESENHVSLQWXXX 239
           QR+S+PYSG+F VIK+RLK+IY                VHK+VT+R ESE HV+LQW   
Sbjct: 522 QRISVPYSGSFEVIKYRLKRIYESVESSTEEPDVPTLIVHKRVTIRLESEIHVTLQWSSD 581

Query: 238 XXXXXXXXXXVALILNISREGPKVMPXXXXXXXXXXXXXXVQKVVYSLLVSLFGNVKAGE 59
                     VA+ILNI R+GPKV+P               QKVVY+L+ SLFG+VK  E
Sbjct: 582 YISDMVSDSVVAMILNIGRQGPKVVPIEEAAKTEEETEKVAQKVVYALMASLFGDVKVAE 641

Query: 58  AGRLIITVDGDTAKVDWKN 2
            G L+I+VDGD A +D ++
Sbjct: 642 EGELVISVDGDVAHLDGRS 660


>ref|NP_001051928.1| Os03g0852900 [Oryza sativa Japonica Group]
           gi|27573349|gb|AAO20067.1| putative cleavage and
           polyadenylation specifity factor protein [Oryza sativa
           Japonica Group] gi|29126360|gb|AAO66552.1| putative
           cleavage and polyadenylation specifity factor [Oryza
           sativa Japonica Group] gi|108712151|gb|ABF99946.1|
           Cleavage and polyadenylation specificity factor, 73 kDa
           subunit, putative, expressed [Oryza sativa Japonica
           Group] gi|113550399|dbj|BAF13842.1| Os03g0852900 [Oryza
           sativa Japonica Group] gi|125588676|gb|EAZ29340.1|
           hypothetical protein OsJ_13407 [Oryza sativa Japonica
           Group]
          Length = 700

 Score =  116 bits (291), Expect = 2e-24
 Identities = 62/139 (44%), Positives = 85/139 (61%)
 Frame = -3

Query: 418 QRVSIPYSGAFGVIKHRLKQIYXXXXXXXXXXXXXXXXVHKQVTVRHESENHVSLQWXXX 239
           QR+++PYSG+F VIK+RLKQIY                VH++VT+R ESE++V+LQW   
Sbjct: 529 QRIAVPYSGSFEVIKYRLKQIYESVESSTEESDVPTLIVHERVTIRLESESYVTLQWSSD 588

Query: 238 XXXXXXXXXXVALILNISREGPKVMPXXXXXXXXXXXXXXVQKVVYSLLVSLFGNVKAGE 59
                     VA++LNI REGPKV+P               QKVVY+L+VSLFG+VK  E
Sbjct: 589 PISDMVSDSVVAMVLNIGREGPKVVPVEEAVKTQEETERVAQKVVYALMVSLFGDVKVAE 648

Query: 58  AGRLIITVDGDTAKVDWKN 2
            G+L+I+VDG  A +D ++
Sbjct: 649 EGKLVISVDGQVAHLDGRS 667


>gb|EAY92623.1| hypothetical protein OsI_14368 [Oryza sativa Indica Group]
          Length = 700

 Score =  116 bits (291), Expect = 2e-24
 Identities = 62/139 (44%), Positives = 85/139 (61%)
 Frame = -3

Query: 418 QRVSIPYSGAFGVIKHRLKQIYXXXXXXXXXXXXXXXXVHKQVTVRHESENHVSLQWXXX 239
           QR+++PYSG+F VIK+RLKQIY                VH++VT+R ESE++V+LQW   
Sbjct: 529 QRIAVPYSGSFEVIKYRLKQIYESVESSTEESDVPTLIVHERVTIRLESESYVTLQWSSD 588

Query: 238 XXXXXXXXXXVALILNISREGPKVMPXXXXXXXXXXXXXXVQKVVYSLLVSLFGNVKAGE 59
                     VA++LNI REGPKV+P               QKVVY+L+VSLFG+VK  E
Sbjct: 589 PISDMVSDSVVAMVLNIGREGPKVVPVEEAVKTQEETERVAQKVVYALMVSLFGDVKVAE 648

Query: 58  AGRLIITVDGDTAKVDWKN 2
            G+L+I+VDG  A +D ++
Sbjct: 649 EGKLVISVDGQVAHLDGRS 667


>ref|XP_003559115.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            3-I-like [Brachypodium distachyon]
          Length = 768

 Score =  116 bits (290), Expect = 2e-24
 Identities = 62/136 (45%), Positives = 83/136 (61%)
 Frame = -3

Query: 418  QRVSIPYSGAFGVIKHRLKQIYXXXXXXXXXXXXXXXXVHKQVTVRHESENHVSLQWXXX 239
            QR+++PYSG+F VIK+RLKQIY                VH++VT+R ESE++V+LQW   
Sbjct: 597  QRIAVPYSGSFEVIKYRLKQIYESVESCPEEPDVPTLIVHERVTIRLESESYVTLQWSSD 656

Query: 238  XXXXXXXXXXVALILNISREGPKVMPXXXXXXXXXXXXXXVQKVVYSLLVSLFGNVKAGE 59
                      VA+ILNI REGPKV+P               +KVVY+L+VSLFG+VK  E
Sbjct: 657  PISDMVSDSVVAMILNIGREGPKVVPVEEAEKTQEETEKVARKVVYALMVSLFGDVKVAE 716

Query: 58   AGRLIITVDGDTAKVD 11
             G+ +I+VDGD A +D
Sbjct: 717  GGKFVISVDGDVAHLD 732


>ref|XP_003633408.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           3-I-like [Vitis vinifera]
          Length = 694

 Score =  115 bits (287), Expect = 5e-24
 Identities = 64/137 (46%), Positives = 82/137 (59%), Gaps = 1/137 (0%)
 Frame = -3

Query: 418 QRVSIPYSGAFGVIKHRLKQIYXXXXXXXXXXXXXXXXV-HKQVTVRHESENHVSLQWXX 242
           QR++IPY+GAFGVIKHRLKQIY                  H++VTV+HESE H+SL W  
Sbjct: 522 QRITIPYTGAFGVIKHRLKQIYESVESLPDEESEVPAFRVHERVTVKHESEKHISLHWTS 581

Query: 241 XXXXXXXXXXXVALILNISREGPKVMPXXXXXXXXXXXXXXVQKVVYSLLVSLFGNVKAG 62
                      VAL+LNISRE PKV+                +KV+++LLVSLFG+VK G
Sbjct: 582 DPISDMVSDSIVALVLNISREIPKVVVESEAIKTEEENGKKAEKVIHALLVSLFGDVKLG 641

Query: 61  EAGRLIITVDGDTAKVD 11
           E G L+I+VDG+ A +D
Sbjct: 642 ENGNLVISVDGNVAHLD 658