BLASTX nr result

ID: Dioscorea21_contig00019547 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00019547
         (280 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317288.1| predicted protein [Populus trichocarpa] gi|2...    63   2e-08
ref|XP_002277187.1| PREDICTED: vacuolar protein sorting-associat...    61   8e-08
dbj|BAJ94951.1| predicted protein [Hordeum vulgare subsp. vulgar...    59   3e-07
ref|XP_002531202.1| Protein C6orf55, putative [Ricinus communis]...    59   3e-07
ref|NP_001057476.1| Os06g0308800 [Oryza sativa Japonica Group] g...    55   6e-06

>ref|XP_002317288.1| predicted protein [Populus trichocarpa] gi|222860353|gb|EEE97900.1|
           predicted protein [Populus trichocarpa]
          Length = 429

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 26/45 (57%), Positives = 36/45 (80%)
 Frame = -2

Query: 267 QSQMPQNYHTHDNAGQSYSYPNFQSYPGFNDTSLPTVPTHQPYYH 133
           Q  +PQNY +H+ +  SYSYPNFQSYP F+++SLP+VP+H P Y+
Sbjct: 290 QPHLPQNYQSHEPS--SYSYPNFQSYPSFSESSLPSVPSHHPSYY 332


>ref|XP_002277187.1| PREDICTED: vacuolar protein sorting-associated protein VTA1 homolog
           [Vitis vinifera]
          Length = 426

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 30/75 (40%), Positives = 40/75 (53%)
 Frame = -2

Query: 267 QSQMPQNYHTHDNAGQSYSYPNFQSYPGFNDTSLPTVPTHQPYYHXXXXXXXXXXXXXXX 88
           Q Q+PQN  +H+    SYSYPNFQSYP F ++SLP  P+H P Y+               
Sbjct: 287 QQQLPQNCPSHETPS-SYSYPNFQSYPSFTESSLPAAPSHYPSYYQGSDASYSPQSAPVS 345

Query: 87  XXXSTVQYDSGSGSK 43
              S  QY+S  G++
Sbjct: 346 SYPSAAQYNSSGGNE 360


>dbj|BAJ94951.1| predicted protein [Hordeum vulgare subsp. vulgare]
           gi|326514200|dbj|BAJ92250.1| predicted protein [Hordeum
           vulgare subsp. vulgare]
          Length = 487

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 24/49 (48%), Positives = 32/49 (65%)
 Frame = -2

Query: 279 YSNEQSQMPQNYHTHDNAGQSYSYPNFQSYPGFNDTSLPTVPTHQPYYH 133
           Y+ E     QNY+  +     Y+YPNFQSYP F D++LP+V THQP +H
Sbjct: 338 YTIEPQHTSQNYYATETPPAPYNYPNFQSYPSFQDSTLPSVTTHQPSFH 386


>ref|XP_002531202.1| Protein C6orf55, putative [Ricinus communis]
           gi|223529204|gb|EEF31179.1| Protein C6orf55, putative
           [Ricinus communis]
          Length = 422

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 28/49 (57%), Positives = 36/49 (73%), Gaps = 1/49 (2%)
 Frame = -2

Query: 279 YSNEQSQ-MPQNYHTHDNAGQSYSYPNFQSYPGFNDTSLPTVPTHQPYY 136
           YS E  Q + +NY +H+    SYSYPNFQSYP F ++SLP+VP+H PYY
Sbjct: 281 YSQEPQQPVLRNYPSHE--APSYSYPNFQSYPSFTESSLPSVPSHIPYY 327


>ref|NP_001057476.1| Os06g0308800 [Oryza sativa Japonica Group]
           gi|54290626|dbj|BAD62197.1| putative LYST-interacting
           protein LIP5 [Oryza sativa Japonica Group]
           gi|54291496|dbj|BAD62317.1| putative LYST-interacting
           protein LIP5 [Oryza sativa Japonica Group]
           gi|113595516|dbj|BAF19390.1| Os06g0308800 [Oryza sativa
           Japonica Group] gi|125596989|gb|EAZ36769.1| hypothetical
           protein OsJ_21105 [Oryza sativa Japonica Group]
           gi|215694996|dbj|BAG90187.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 488

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 22/49 (44%), Positives = 32/49 (65%)
 Frame = -2

Query: 279 YSNEQSQMPQNYHTHDNAGQSYSYPNFQSYPGFNDTSLPTVPTHQPYYH 133
           Y+ E     QNY++ +     Y+Y NFQSYP F D+S+P+VPTHQ  ++
Sbjct: 339 YTIEPQHTSQNYYSTETPAAPYNYSNFQSYPSFQDSSVPSVPTHQSSFY 387


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