BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00019024
         (606 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282385.1| PREDICTED: small nuclear ribonucleoprotein S...   102   9e-44
ref|XP_002270532.2| PREDICTED: small nuclear ribonucleoprotein S...   103   6e-43
ref|XP_004164112.1| PREDICTED: small nuclear ribonucleoprotein S...   100   1e-42
ref|NP_001237722.1| uncharacterized protein LOC100305856 [Glycin...   100   3e-42
ref|XP_004145538.1| PREDICTED: small nuclear ribonucleoprotein S...    99   5e-42

>ref|XP_002282385.1| PREDICTED: small nuclear ribonucleoprotein Sm D3 [Vitis vinifera]
           gi|297744494|emb|CBI37756.3| unnamed protein product
           [Vitis vinifera]
          Length = 132

 Score =  102 bits (255), Expect(2) = 9e-44
 Identities = 50/52 (96%), Positives = 52/52 (100%)
 Frame = +1

Query: 274 LEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGSALGVGRGRAVAMRS 429
           LEHVFIRGSKVRFMVIPDMLKNAPMFKRLDAR+KGKGSALGVGRGRAVAMR+
Sbjct: 60  LEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARVKGKGSALGVGRGRAVAMRA 111



 Score =  100 bits (248), Expect(2) = 9e-44
 Identities = 46/47 (97%), Positives = 47/47 (100%)
 Frame = +3

Query: 30  MSRSLGIPVKLLHEAAGHIVTVELKSGELYRGSMIECEDNWNCQLEN 170
           MSRSLGIPVKLLHEAAGH+VTVELKSGELYRGSMIECEDNWNCQLEN
Sbjct: 1   MSRSLGIPVKLLHEAAGHVVTVELKSGELYRGSMIECEDNWNCQLEN 47


>ref|XP_002270532.2| PREDICTED: small nuclear ribonucleoprotein Sm D3-like [Vitis
           vinifera] gi|297745546|emb|CBI40711.3| unnamed protein
           product [Vitis vinifera]
          Length = 132

 Score =  103 bits (256), Expect(2) = 6e-43
 Identities = 51/52 (98%), Positives = 52/52 (100%)
 Frame = +1

Query: 274 LEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGSALGVGRGRAVAMRS 429
           LEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGSALGVGRGRAVAMR+
Sbjct: 60  LEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGSALGVGRGRAVAMRA 111



 Score = 97.1 bits (240), Expect(2) = 6e-43
 Identities = 44/47 (93%), Positives = 47/47 (100%)
 Frame = +3

Query: 30  MSRSLGIPVKLLHEAAGHIVTVELKSGELYRGSMIECEDNWNCQLEN 170
           MSRSLGIPVKLLHEAAGH+VTVELKSGELYRG+MIECEDNWNCQLE+
Sbjct: 1   MSRSLGIPVKLLHEAAGHVVTVELKSGELYRGNMIECEDNWNCQLES 47


>ref|XP_004164112.1| PREDICTED: small nuclear ribonucleoprotein Sm D3-like [Cucumis
           sativus]
          Length = 132

 Score =  100 bits (250), Expect(2) = 1e-42
 Identities = 49/52 (94%), Positives = 52/52 (100%)
 Frame = +1

Query: 274 LEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGSALGVGRGRAVAMRS 429
           LEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKG++LGVGRGRAVAMR+
Sbjct: 60  LEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLGVGRGRAVAMRA 111



 Score = 98.6 bits (244), Expect(2) = 1e-42
 Identities = 45/47 (95%), Positives = 47/47 (100%)
 Frame = +3

Query: 30  MSRSLGIPVKLLHEAAGHIVTVELKSGELYRGSMIECEDNWNCQLEN 170
           MSRSLGIPVKLLHEAAGH+V+VELKSGELYRGSMIECEDNWNCQLEN
Sbjct: 1   MSRSLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLEN 47


>ref|NP_001237722.1| uncharacterized protein LOC100305856 [Glycine max]
           gi|356525557|ref|XP_003531391.1| PREDICTED: small
           nuclear ribonucleoprotein Sm D3-like [Glycine max]
           gi|255626793|gb|ACU13741.1| unknown [Glycine max]
          Length = 131

 Score =  100 bits (250), Expect(2) = 3e-42
 Identities = 49/52 (94%), Positives = 52/52 (100%)
 Frame = +1

Query: 274 LEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGSALGVGRGRAVAMRS 429
           LEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKG++LGVGRGRAVAMR+
Sbjct: 60  LEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLGVGRGRAVAMRA 111



 Score = 97.1 bits (240), Expect(2) = 3e-42
 Identities = 44/47 (93%), Positives = 47/47 (100%)
 Frame = +3

Query: 30  MSRSLGIPVKLLHEAAGHIVTVELKSGELYRGSMIECEDNWNCQLEN 170
           MSRSLGIPVKLLHEA+GH+VTVELKSGELYRGSMIECEDNWNCQLE+
Sbjct: 1   MSRSLGIPVKLLHEASGHVVTVELKSGELYRGSMIECEDNWNCQLES 47


>ref|XP_004145538.1| PREDICTED: small nuclear ribonucleoprotein Sm D3-like [Cucumis
           sativus]
          Length = 132

 Score = 98.6 bits (244), Expect(2) = 5e-42
 Identities = 45/47 (95%), Positives = 47/47 (100%)
 Frame = +3

Query: 30  MSRSLGIPVKLLHEAAGHIVTVELKSGELYRGSMIECEDNWNCQLEN 170
           MSRSLGIPVKLLHEAAGH+V+VELKSGELYRGSMIECEDNWNCQLEN
Sbjct: 1   MSRSLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLEN 47



 Score = 98.6 bits (244), Expect(2) = 5e-42
 Identities = 48/52 (92%), Positives = 51/52 (98%)
 Frame = +1

Query: 274 LEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGSALGVGRGRAVAMRS 429
           LEHVFIRGSKV FMVIPDMLKNAPMFKRLDARIKGKG++LGVGRGRAVAMR+
Sbjct: 60  LEHVFIRGSKVSFMVIPDMLKNAPMFKRLDARIKGKGASLGVGRGRAVAMRA 111