BLASTX nr result

ID: Dioscorea21_contig00019007 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00019007
         (615 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004140701.1| PREDICTED: DNA repair and recombination prot...   136   3e-30
ref|XP_003516779.1| PREDICTED: DNA repair and recombination prot...   136   3e-30
dbj|BAD17217.1| putative DNA repair protein rhp54 [Oryza sativa ...   132   5e-29
gb|EEE57852.1| hypothetical protein OsJ_08484 [Oryza sativa Japo...   132   5e-29
gb|EEC74047.1| hypothetical protein OsI_09041 [Oryza sativa Indi...   132   5e-29

>ref|XP_004140701.1| PREDICTED: DNA repair and recombination protein RAD54-like [Cucumis
            sativus] gi|449497618|ref|XP_004160452.1| PREDICTED: DNA
            repair and recombination protein RAD54-like [Cucumis
            sativus]
          Length = 928

 Score =  136 bits (342), Expect = 3e-30
 Identities = 80/166 (48%), Positives = 100/166 (60%)
 Frame = -1

Query: 573  ENKDTTDKGQLNQQVDDIGGFAQIAGCLRKLKSSEKQLGSPLEEDLASWGHHFNLSTVPD 394
            EN  T    Q +Q   DIGGFAQ+AGCL KLK SE+Q+GSPLEEDL +WGHHF+ +TVPD
Sbjct: 739  ENLSTNGPCQSDQVTSDIGGFAQLAGCLDKLKKSEQQVGSPLEEDLGNWGHHFDSTTVPD 798

Query: 393  LILQASAGDEVSFVFTNQVDGKLIPVESEKRPANQQMDAEKHPNYNCHRNRSQALTMPLL 214
             ILQASAGDEV+FVF+NQVDGKL+PVES   P  +  DAE + N N   N++        
Sbjct: 799  TILQASAGDEVTFVFSNQVDGKLVPVESMSSP--RMKDAEGNGN-NSRLNQN-------- 847

Query: 213  KGTPPNSQKTFPNGLHVPKKLSISPKEQSSLKRMSVTSKLSDDDFM 76
                 + QK F    H     SI+  E  +   +  TS +   + M
Sbjct: 848  -----SRQKPFLLSQHRKPLQSITSNEDPNKGTLKFTSTVFQSETM 888


>ref|XP_003516779.1| PREDICTED: DNA repair and recombination protein RAD54-like [Glycine
            max]
          Length = 894

 Score =  136 bits (342), Expect = 3e-30
 Identities = 73/142 (51%), Positives = 89/142 (62%)
 Frame = -1

Query: 591  DESKIAENKDTTDKGQLNQQVDDIGGFAQIAGCLRKLKSSEKQLGSPLEEDLASWGHHFN 412
            D  +  E + T    + +++  DIGGFA+IAGCL+ LK SEKQ+GSPLEEDL SWGHHF 
Sbjct: 722  DGPRSTEAQSTITDSESDEETSDIGGFAEIAGCLQNLKRSEKQVGSPLEEDLGSWGHHFF 781

Query: 411  LSTVPDLILQASAGDEVSFVFTNQVDGKLIPVESEKRPANQQMDAEKHPNYNCHRNRSQA 232
             ++VPD ILQASAGDEV+FVFTNQV+G+L+PVES   P  QQ D +K             
Sbjct: 782  PTSVPDAILQASAGDEVTFVFTNQVNGRLVPVESIMSPKLQQKDPKKE------------ 829

Query: 231  LTMPLLKGTPPNSQKTFPNGLH 166
                LLK      QK  P  LH
Sbjct: 830  ----LLKSKQNGKQKPTPFSLH 847


>dbj|BAD17217.1| putative DNA repair protein rhp54 [Oryza sativa Japonica Group]
          Length = 912

 Score =  132 bits (332), Expect = 5e-29
 Identities = 85/197 (43%), Positives = 111/197 (56%), Gaps = 23/197 (11%)
 Frame = -1

Query: 597  ILDESKI---AENKDTTDKGQLNQQVDDIGGFAQIAGCLRKLKSSEKQLGSPLEEDLASW 427
            +LD SK    A   + ++ G+ N  +D IGGF  I+GC++K+ SS +Q+GSP EEDL SW
Sbjct: 719  VLDGSKFDSAATEHEASNSGE-NSYID-IGGFGAISGCVQKMNSSNQQIGSPSEEDLGSW 776

Query: 426  GHHFNLSTVPDLILQASAGDEVSFVFTNQVDGKLIPVESEKRPA---------NQQMDAE 274
            GHH + STVPD ILQ S+GDEVSFVFTNQ+DGKL+PVES  R A         N + +  
Sbjct: 777  GHHSDPSTVPDTILQCSSGDEVSFVFTNQIDGKLVPVESMARAATHRTHEVTVNAEKEVG 836

Query: 273  KHPNYNCHRNRSQALTMPLLK-----------GTPPNSQKTFPNGLHVPKKLSISPKEQS 127
            K  + N      Q+L    LK             P  S++  PN L    K S S   Q 
Sbjct: 837  KINSSNVPGTERQSLLGKNLKMMGFNLKNSSMKFPTKSRRMLPNCLQGMNKTSTSSDHQQ 896

Query: 126  SLKRMSVTSKLSDDDFM 76
            + K++ V S  SDDDF+
Sbjct: 897  T-KKLHVISDASDDDFV 912


>gb|EEE57852.1| hypothetical protein OsJ_08484 [Oryza sativa Japonica Group]
          Length = 952

 Score =  132 bits (332), Expect = 5e-29
 Identities = 85/197 (43%), Positives = 111/197 (56%), Gaps = 23/197 (11%)
 Frame = -1

Query: 597  ILDESKI---AENKDTTDKGQLNQQVDDIGGFAQIAGCLRKLKSSEKQLGSPLEEDLASW 427
            +LD SK    A   + ++ G+ N  +D IGGF  I+GC++K+ SS +Q+GSP EEDL SW
Sbjct: 759  VLDGSKFDSAATEHEASNSGE-NSYID-IGGFGAISGCVQKMNSSNQQIGSPSEEDLGSW 816

Query: 426  GHHFNLSTVPDLILQASAGDEVSFVFTNQVDGKLIPVESEKRPA---------NQQMDAE 274
            GHH + STVPD ILQ S+GDEVSFVFTNQ+DGKL+PVES  R A         N + +  
Sbjct: 817  GHHSDPSTVPDTILQCSSGDEVSFVFTNQIDGKLVPVESMARAATHRTHEVTVNAEKEVG 876

Query: 273  KHPNYNCHRNRSQALTMPLLK-----------GTPPNSQKTFPNGLHVPKKLSISPKEQS 127
            K  + N      Q+L    LK             P  S++  PN L    K S S   Q 
Sbjct: 877  KINSSNVPGTERQSLLGKNLKMMGFNLKNSSMKFPTKSRRMLPNCLQGMNKTSTSSDHQQ 936

Query: 126  SLKRMSVTSKLSDDDFM 76
            + K++ V S  SDDDF+
Sbjct: 937  T-KKLHVISDASDDDFV 952


>gb|EEC74047.1| hypothetical protein OsI_09041 [Oryza sativa Indica Group]
          Length = 952

 Score =  132 bits (332), Expect = 5e-29
 Identities = 85/197 (43%), Positives = 111/197 (56%), Gaps = 23/197 (11%)
 Frame = -1

Query: 597  ILDESKI---AENKDTTDKGQLNQQVDDIGGFAQIAGCLRKLKSSEKQLGSPLEEDLASW 427
            +LD SK    A   + ++ G+ N  +D IGGF  I+GC++K+ SS +Q+GSP EEDL SW
Sbjct: 759  VLDGSKFDSAATEHEASNSGE-NSYID-IGGFGAISGCVQKMNSSNQQIGSPSEEDLGSW 816

Query: 426  GHHFNLSTVPDLILQASAGDEVSFVFTNQVDGKLIPVESEKRPA---------NQQMDAE 274
            GHH + STVPD ILQ S+GDEVSFVFTNQ+DGKL+PVES  R A         N + +  
Sbjct: 817  GHHSDPSTVPDTILQCSSGDEVSFVFTNQIDGKLVPVESMARAATHRTHEVTVNAEKEVG 876

Query: 273  KHPNYNCHRNRSQALTMPLLK-----------GTPPNSQKTFPNGLHVPKKLSISPKEQS 127
            K  + N      Q+L    LK             P  S++  PN L    K S S   Q 
Sbjct: 877  KINSSNVPGTERQSLLGKNLKMMGFNLKNSSMKFPTKSRRMLPNCLQGMNKTSTSSDHQQ 936

Query: 126  SLKRMSVTSKLSDDDFM 76
            + K++ V S  SDDDF+
Sbjct: 937  T-KKLHVISDASDDDFV 952


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