BLASTX nr result

ID: Dioscorea21_contig00018989 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00018989
         (659 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282527.1| PREDICTED: uncharacterized protein LOC100252...   122   6e-26
ref|XP_002317925.1| predicted protein [Populus trichocarpa] gi|1...   120   2e-25
gb|AFK36819.1| unknown [Lotus japonicus]                              114   1e-23
gb|ACU16340.1| unknown [Glycine max]                                  108   7e-22
ref|XP_003599918.1| Elongin-A [Medicago truncatula] gi|355488966...   104   1e-20

>ref|XP_002282527.1| PREDICTED: uncharacterized protein LOC100252279 [Vitis vinifera]
           gi|302143487|emb|CBI22048.3| unnamed protein product
           [Vitis vinifera]
          Length = 223

 Score =  122 bits (306), Expect = 6e-26
 Identities = 69/145 (47%), Positives = 94/145 (64%)
 Frame = -3

Query: 657 VIKRMKQRDLVFKWRQLFEAKTKEREEAQQKLSEKLKQRYAEEQAKKQSRQIKICAKVPP 478
           V++RMK + + FKW +L+EAK K+R+EAQ+K  +++KQ Y +E A+KQSRQ+KIC KVPP
Sbjct: 86  VVERMKLKKVSFKWSKLYEAKLKDRDEAQKKSFDRIKQLYQKEDARKQSRQVKICTKVPP 145

Query: 477 XXXXXXXXXXXXXGYDVSNVKSNLMKKAKLEYLNSHEAKVHAIIRKNALQTKSMPPPSIP 298
                            SN+KSNLMKKAK+E LNS E K  A ++K ALQ++ + P    
Sbjct: 146 SSNKRCFYGGP----GTSNLKSNLMKKAKVECLNSPEVKNLAAMKKQALQSRCIAP---- 197

Query: 297 RSSKPGSFLGKGPATSSKPPKPMGR 223
            + K GSF GK  A++S   KPM R
Sbjct: 198 -ARKLGSFSGKDCASTSNLTKPMQR 221


>ref|XP_002317925.1| predicted protein [Populus trichocarpa] gi|118481523|gb|ABK92704.1|
           unknown [Populus trichocarpa]
           gi|222858598|gb|EEE96145.1| predicted protein [Populus
           trichocarpa]
          Length = 227

 Score =  120 bits (301), Expect = 2e-25
 Identities = 67/145 (46%), Positives = 93/145 (64%)
 Frame = -3

Query: 657 VIKRMKQRDLVFKWRQLFEAKTKEREEAQQKLSEKLKQRYAEEQAKKQSRQIKICAKVPP 478
           VI+RM+Q+ + F+W QL+EAK K+  EA+ KL+ +++Q Y +E  +KQSRQ+++C+KVPP
Sbjct: 85  VIQRMRQKKVSFRWLQLYEAKLKDIAEAENKLAARIRQLYKKEDDRKQSRQVRLCSKVPP 144

Query: 477 XXXXXXXXXXXXXGYDVSNVKSNLMKKAKLEYLNSHEAKVHAIIRKNALQTKSMPPPSIP 298
                        GY++SN KSNLMKKAK+++L S E +  A ++KNALQ  S    S  
Sbjct: 145 SSNKRSFCGGSGPGYNLSNGKSNLMKKAKMDFLKSREVQNIAAMKKNALQRNS---SSSS 201

Query: 297 RSSKPGSFLGKGPATSSKPPKPMGR 223
               PGSF GK  A SS P KP  R
Sbjct: 202 MMKPPGSFPGKSSA-SSNPMKPRER 225


>gb|AFK36819.1| unknown [Lotus japonicus]
          Length = 222

 Score =  114 bits (286), Expect = 1e-23
 Identities = 61/145 (42%), Positives = 90/145 (62%)
 Frame = -3

Query: 657 VIKRMKQRDLVFKWRQLFEAKTKEREEAQQKLSEKLKQRYAEEQAKKQSRQIKICAKVPP 478
           VIKRM+++ + FKW QL+EAK KE  EA+ +   ++KQRY +E A+KQSRQ+++C K PP
Sbjct: 89  VIKRMREKKVSFKWMQLYEAKVKEIAEAENEAVARIKQRYQKEDARKQSRQVQLCTKTPP 148

Query: 477 XXXXXXXXXXXXXGYDVSNVKSNLMKKAKLEYLNSHEAKVHAIIRKNALQTKSMPPPSIP 298
                        GY+VSN+KSN+MKK+++E L SHE K  A ++  ++Q          
Sbjct: 149 ---SSKKRFWGDNGYNVSNLKSNIMKKSRIELLKSHEVKNLAAMKNKSIQ---------- 195

Query: 297 RSSKPGSFLGKGPATSSKPPKPMGR 223
           R++ P SF+  G  +SSK P+   R
Sbjct: 196 RNNSPSSFMKSGNGSSSKDPRSAKR 220


>gb|ACU16340.1| unknown [Glycine max]
          Length = 230

 Score =  108 bits (271), Expect = 7e-22
 Identities = 59/130 (45%), Positives = 83/130 (63%)
 Frame = -3

Query: 657 VIKRMKQRDLVFKWRQLFEAKTKEREEAQQKLSEKLKQRYAEEQAKKQSRQIKICAKVPP 478
           VIKRMK++ + F+W QL+EAK KER +A+ +  ++++Q Y +E A+KQSRQ++ C KVPP
Sbjct: 91  VIKRMKKKRVNFRWMQLYEAKGKERAQAENEALDRIRQLYKKEDARKQSRQVRTCTKVPP 150

Query: 477 XXXXXXXXXXXXXGYDVSNVKSNLMKKAKLEYLNSHEAKVHAIIRKNALQTKSMPPPSIP 298
                        GY+VSNVKSN+MKKAK+E+L SHE K  A ++  ++Q      PS  
Sbjct: 151 -SSKRRFWGDNGPGYNVSNVKSNIMKKAKIEFLKSHEVKNLAAMKNKSIQRN----PSSS 205

Query: 297 RSSKPGSFLG 268
              K GS  G
Sbjct: 206 SFKKTGSISG 215


>ref|XP_003599918.1| Elongin-A [Medicago truncatula] gi|355488966|gb|AES70169.1|
           Elongin-A [Medicago truncatula]
          Length = 232

 Score =  104 bits (260), Expect = 1e-20
 Identities = 61/140 (43%), Positives = 87/140 (62%)
 Frame = -3

Query: 657 VIKRMKQRDLVFKWRQLFEAKTKEREEAQQKLSEKLKQRYAEEQAKKQSRQIKICAKVPP 478
           +I+RM ++ + F+W QL+EAK KE  +A+ +  ++L++RY    AKKQSRQ+K C K+PP
Sbjct: 89  IIRRMTEKRVSFRWLQLYEAKGKEVAQAENEAIDRLRERYKNADAKKQSRQVKTCTKLPP 148

Query: 477 XXXXXXXXXXXXXGYDVSNVKSNLMKKAKLEYLNSHEAKVHAIIRKNALQTKSMPPPSIP 298
                        GY+VSNVKSN+MKK+K+E+L S E K  A ++KN++   S    S  
Sbjct: 149 -SSKRRFWGDNGPGYNVSNVKSNIMKKSKIEFLKSREVKNIAAMKKNSIPRSS----SSS 203

Query: 297 RSSKPGSFLGKGPATSSKPP 238
            S K GS  G G  +SSK P
Sbjct: 204 SSMKIGSMSGVG--SSSKGP 221


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