BLASTX nr result

ID: Dioscorea21_contig00018975 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00018975
         (396 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277938.2| PREDICTED: polypyrimidine tract-binding prot...   157   6e-37
emb|CBI21552.3| unnamed protein product [Vitis vinifera]              157   6e-37
emb|CAN82466.1| hypothetical protein VITISV_002663 [Vitis vinifera]   157   6e-37
ref|XP_002264763.2| PREDICTED: polypyrimidine tract-binding prot...   157   8e-37
ref|XP_002264689.2| PREDICTED: polypyrimidine tract-binding prot...   157   8e-37

>ref|XP_002277938.2| PREDICTED: polypyrimidine tract-binding protein homolog 3-like
           isoform 1 [Vitis vinifera]
          Length = 448

 Score =  157 bits (398), Expect = 6e-37
 Identities = 80/91 (87%), Positives = 84/91 (92%)
 Frame = -2

Query: 275 MTEPSKVIHVRNVGLEITENDLHQLVQPFGVVTKLVMLRAKNQALLQMQDVDSAVNVLQY 96
           MTEPSKVIHVRNVG EI+ENDL QLV PFGVVTKLVMLRAKNQALLQMQDV SAV+ LQY
Sbjct: 1   MTEPSKVIHVRNVGPEISENDLLQLVHPFGVVTKLVMLRAKNQALLQMQDVASAVSALQY 60

Query: 95  YTNTQPSVRGRNVYMQFSSHQELTTVDQNSQ 3
           Y N QPSVRGRNVY+QFSSHQELTT+DQNSQ
Sbjct: 61  YANVQPSVRGRNVYVQFSSHQELTTMDQNSQ 91


>emb|CBI21552.3| unnamed protein product [Vitis vinifera]
          Length = 374

 Score =  157 bits (398), Expect = 6e-37
 Identities = 80/91 (87%), Positives = 84/91 (92%)
 Frame = -2

Query: 275 MTEPSKVIHVRNVGLEITENDLHQLVQPFGVVTKLVMLRAKNQALLQMQDVDSAVNVLQY 96
           MTEPSKVIHVRNVG EI+ENDL QLV PFGVVTKLVMLRAKNQALLQMQDV SAV+ LQY
Sbjct: 1   MTEPSKVIHVRNVGPEISENDLLQLVHPFGVVTKLVMLRAKNQALLQMQDVASAVSALQY 60

Query: 95  YTNTQPSVRGRNVYMQFSSHQELTTVDQNSQ 3
           Y N QPSVRGRNVY+QFSSHQELTT+DQNSQ
Sbjct: 61  YANVQPSVRGRNVYVQFSSHQELTTMDQNSQ 91


>emb|CAN82466.1| hypothetical protein VITISV_002663 [Vitis vinifera]
          Length = 476

 Score =  157 bits (398), Expect = 6e-37
 Identities = 80/91 (87%), Positives = 84/91 (92%)
 Frame = -2

Query: 275 MTEPSKVIHVRNVGLEITENDLHQLVQPFGVVTKLVMLRAKNQALLQMQDVDSAVNVLQY 96
           MTEPSKVIHVRNVG EI+ENDL QLV PFGVVTKLVMLRAKNQALLQMQDV SAV+ LQY
Sbjct: 1   MTEPSKVIHVRNVGPEISENDLLQLVHPFGVVTKLVMLRAKNQALLQMQDVASAVSALQY 60

Query: 95  YTNTQPSVRGRNVYMQFSSHQELTTVDQNSQ 3
           Y N QPSVRGRNVY+QFSSHQELTT+DQNSQ
Sbjct: 61  YANVQPSVRGRNVYVQFSSHQELTTMDQNSQ 91


>ref|XP_002264763.2| PREDICTED: polypyrimidine tract-binding protein homolog 3 isoform 2
           [Vitis vinifera]
          Length = 432

 Score =  157 bits (397), Expect = 8e-37
 Identities = 77/91 (84%), Positives = 84/91 (92%)
 Frame = -2

Query: 275 MTEPSKVIHVRNVGLEITENDLHQLVQPFGVVTKLVMLRAKNQALLQMQDVDSAVNVLQY 96
           MTEPSKVIHVRNVG EI+ENDL QL QPFGV+TKLVMLRAKNQALLQMQDV SA N +Q+
Sbjct: 1   MTEPSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALLQMQDVPSAANAMQF 60

Query: 95  YTNTQPSVRGRNVYMQFSSHQELTTVDQNSQ 3
           YTN QPS+RGRNVY+QFSSHQELTTVDQN+Q
Sbjct: 61  YTNVQPSIRGRNVYVQFSSHQELTTVDQNAQ 91


>ref|XP_002264689.2| PREDICTED: polypyrimidine tract-binding protein homolog 3 isoform 1
           [Vitis vinifera]
          Length = 445

 Score =  157 bits (397), Expect = 8e-37
 Identities = 77/91 (84%), Positives = 84/91 (92%)
 Frame = -2

Query: 275 MTEPSKVIHVRNVGLEITENDLHQLVQPFGVVTKLVMLRAKNQALLQMQDVDSAVNVLQY 96
           MTEPSKVIHVRNVG EI+ENDL QL QPFGV+TKLVMLRAKNQALLQMQDV SA N +Q+
Sbjct: 1   MTEPSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALLQMQDVPSAANAMQF 60

Query: 95  YTNTQPSVRGRNVYMQFSSHQELTTVDQNSQ 3
           YTN QPS+RGRNVY+QFSSHQELTTVDQN+Q
Sbjct: 61  YTNVQPSIRGRNVYVQFSSHQELTTVDQNAQ 91


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