BLASTX nr result

ID: Dioscorea21_contig00018958 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00018958
         (941 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270830.2| PREDICTED: uncharacterized protein LOC100251...   358   8e-97
ref|NP_001058135.1| Os06g0634100 [Oryza sativa Japonica Group] g...   337   2e-90
ref|XP_003560559.1| PREDICTED: uncharacterized protein LOC100841...   337   2e-90
ref|XP_002306252.1| predicted protein [Populus trichocarpa] gi|2...   329   7e-88
ref|XP_002527885.1| RNA binding protein, putative [Ricinus commu...   325   7e-87

>ref|XP_002270830.2| PREDICTED: uncharacterized protein LOC100251856 [Vitis vinifera]
          Length = 1440

 Score =  358 bits (920), Expect = 8e-97
 Identities = 177/310 (57%), Positives = 233/310 (75%)
 Frame = +2

Query: 11   EDLSFASMAEQLASGNFDVNANSICLFSKSERKECLVLPRLKLKVIEEAIRVVLEIVYRP 190
            +++SF SMAE+L  G+F+VN N+  + +KS RKE L+LP LKLKV++EAIR+VLEIVYRP
Sbjct: 781  DNISFKSMAEELLGGSFNVNVNTFSISTKSARKEVLILPSLKLKVVQEAIRIVLEIVYRP 840

Query: 191  FFSKISHGCRSGRGHLSALSYVCKEINKPDWCFTICMNKEADDSVISKLISTMEERIIDN 370
            +FSKISHGCRSGRGH +AL Y+ KEI+ PDW F + +NK+ D  V++KLISTM+++I D 
Sbjct: 841  YFSKISHGCRSGRGHSTALKYISKEISNPDWWFILHVNKKLDAVVLAKLISTMQDKIEDP 900

Query: 371  NLFSFIRCLFHARVLNLTFGCIPKGHGLPQEGVLSPILMNIYLDMLDREFFAICMRHEGL 550
            NLF  I+ +FHA+VLNL FG  PKGHGLPQEGVLSPILMNIYLD+ D EF+ + MR+E L
Sbjct: 901  NLFVMIQNMFHAQVLNLEFGGFPKGHGLPQEGVLSPILMNIYLDLFDHEFYRMSMRYEAL 960

Query: 551  GLHAGASKGGQHSMLRSWIRRQRDSADSGKELINGSDVRIYACRYMDEIFVAVSGSKDVA 730
                       HS LRSW RRQ    D        S+ R+++CR+MDEIF A+SGSKD+A
Sbjct: 961  DPGMCIDHDKSHSKLRSWFRRQLKGNDVKYTGRESSNFRVHSCRFMDEIFFAISGSKDIA 1020

Query: 731  LSVKTDITNYLRLFLNLDVIDCSDILPMHDRSCVQFLGTIIRVTAEESEAVKAVHKLKDK 910
            +  K++I NY++  L+LDV + S++LP H    +QFLGT+++ +  ES  V+AVHKLK+K
Sbjct: 1021 IEFKSEILNYMQNSLHLDVSNQSELLPCHGPHGIQFLGTLVKRSVRESPTVRAVHKLKEK 1080

Query: 911  VRLFASQKKE 940
            VRLFASQK+E
Sbjct: 1081 VRLFASQKQE 1090


>ref|NP_001058135.1| Os06g0634100 [Oryza sativa Japonica Group]
            gi|51535774|dbj|BAD37813.1| type II intron maturase-like
            [Oryza sativa Japonica Group] gi|51535891|dbj|BAD37974.1|
            type II intron maturase-like [Oryza sativa Japonica
            Group] gi|113596175|dbj|BAF20049.1| Os06g0634100 [Oryza
            sativa Japonica Group] gi|125597949|gb|EAZ37729.1|
            hypothetical protein OsJ_22070 [Oryza sativa Japonica
            Group] gi|215707247|dbj|BAG93707.1| unnamed protein
            product [Oryza sativa Japonica Group]
          Length = 822

 Score =  337 bits (865), Expect = 2e-90
 Identities = 177/319 (55%), Positives = 226/319 (70%), Gaps = 6/319 (1%)
 Frame = +2

Query: 2    SEREDLSFASMAEQLASGNFDVNANSICLFSKSERKECLVLPRLKLKVIEEAIRVVLEIV 181
            S R+D+ FA++AE L +G FDV AN   + +K      LVLPRL L++I+EA+RVVLE+V
Sbjct: 143  SVRDDVCFATLAELLRTGEFDVRANVYAVVAKRRDGGRLVLPRLNLRIIQEAVRVVLEVV 202

Query: 182  YRPFFSKISHGCRSGRGHLSALSYVCKEINKPDWCFTICMNKEADDSVISKLISTMEERI 361
            YRP FSKISHGCRSGRGH SAL ++  EI  PDWCFTI M+KE D +V+SK+I  ++E+I
Sbjct: 203  YRPHFSKISHGCRSGRGHQSALRFISNEIGIPDWCFTIPMHKEVDRNVLSKIICLIQEKI 262

Query: 362  IDNNLFSFIRCLFHARVLNLTFGCIPKGHGLPQEGVLSPILMNIYLDMLDREFFAICMRH 541
             DN L +F++ +F A V+NL FG  PKGHGLPQEGVL+PILMNIYLD  D E F ICMRH
Sbjct: 263  DDNQLVTFMQHMFDAEVINLVFGGFPKGHGLPQEGVLAPILMNIYLDSFDHEVFRICMRH 322

Query: 542  EGLGLHAGASKGGQHSMLRSWIRRQRDS-ADSGKELINGSD----VRIYACRYMDEIFVA 706
            EGLG  A      Q S LR W R Q     D  +   N +D     ++YACRYMDEIFVA
Sbjct: 323  EGLGSEAADVSDNQESNLRHWFRSQISGLKDREENSDNQTDYPLKTKLYACRYMDEIFVA 382

Query: 707  VSGSKDVALSVKTDITNYLRLFLNLDVIDCSDILPMHDRS-CVQFLGTIIRVTAEESEAV 883
            V GS+D+A  +K+++  YLR  L L+V D   ++P+   S  +QF G+++RVT +ES A+
Sbjct: 383  VVGSRDIAEDIKSEMITYLRKTLFLEVDDRLYLMPVRSNSRGLQFAGSMVRVTTKESAAL 442

Query: 884  KAVHKLKDKVRLFASQKKE 940
            KAVHKLK+KV LFASQK+E
Sbjct: 443  KAVHKLKEKVHLFASQKQE 461


>ref|XP_003560559.1| PREDICTED: uncharacterized protein LOC100841389 [Brachypodium
            distachyon]
          Length = 801

 Score =  337 bits (864), Expect = 2e-90
 Identities = 177/316 (56%), Positives = 232/316 (73%), Gaps = 3/316 (0%)
 Frame = +2

Query: 2    SEREDLSFASMAEQLASGNFDVNANSICLFSKSERKECLVLPRLKLKVIEEAIRVVLEIV 181
            S R+D+ F ++AEQL SG FD+ AN+  + +K    E LVLPRL LKVI+EA+RVVLE+V
Sbjct: 130  SARDDVCFTALAEQLRSGEFDIAANAFKVTAKRRGGEHLVLPRLNLKVIQEAVRVVLEVV 189

Query: 182  YRPFFSKISHGCRSGRGHLSALSYVCKEINKPDWCFTICMNKEADDSVISKLISTMEERI 361
            YRP FS+ISHGCRSGRG+ SAL ++  EI  PDWCFT+ + KE D +V+SKLIS ++E+I
Sbjct: 190  YRPQFSRISHGCRSGRGYHSALRFISNEIGVPDWCFTVPLYKEVDRNVVSKLISQIQEKI 249

Query: 362  IDNNLFSFIRCLFHARVLNLTFGCIPKGHGLPQEGVLSPILMNIYLDMLDREFFAICMRH 541
            +D+ L +F+  +F A V+NL FG  PKGHG+PQEGVL+PILMNIYLD  D E F ICM+H
Sbjct: 250  VDDYLVTFMHDMFDAEVVNLVFGGFPKGHGVPQEGVLAPILMNIYLDSFDHEVFRICMKH 309

Query: 542  EGLGLHAGASKGGQHSMLRSWIRRQ-RDSADSGKELINGS-DVRIYACRYMDEIFVAVSG 715
            EGL   A      Q S LR W R Q +D   + +E   GS ++R+YACRYMDEIFVAV G
Sbjct: 310  EGLCSEATNVADNQGSSLRLWFRSQLKDRDVNYEEQREGSPNIRLYACRYMDEIFVAVVG 369

Query: 716  SKDVALSVKTDITNYLRLFLNLDVIDCSDILPMHDRS-CVQFLGTIIRVTAEESEAVKAV 892
            S+DVA ++K++I +YLR  L L+V D   ++P+   S  +QF GT++RVT++ES A+K+V
Sbjct: 370  SRDVADNIKSEIVDYLRTSLYLNVDDGLYLMPVKKNSRGLQFAGTVVRVTSKESAALKSV 429

Query: 893  HKLKDKVRLFASQKKE 940
            HKLK KV LFA QK+E
Sbjct: 430  HKLKQKVNLFACQKQE 445


>ref|XP_002306252.1| predicted protein [Populus trichocarpa] gi|222855701|gb|EEE93248.1|
            predicted protein [Populus trichocarpa]
          Length = 738

 Score =  329 bits (843), Expect = 7e-88
 Identities = 169/314 (53%), Positives = 225/314 (71%), Gaps = 2/314 (0%)
 Frame = +2

Query: 5    EREDLSFASMAEQLASGNFDVNANSICLFSKSERKECLVLPRLKLKVIEEAIRVVLEIVY 184
            + +++SF SM ++L+ G FDV  N+  + +K  R E LVLP+LKLKV++EAIR+VLE+VY
Sbjct: 81   DNDNISFESMEKELSGGCFDVGGNTFSIATKGARNEILVLPKLKLKVVQEAIRIVLEVVY 140

Query: 185  RPFFSKISHGCRSGRGHLSALSYVCKEINKPDWCFTICMNKEADDSVISKLISTMEERII 364
            RP+FSKISHGCRSGRGH SAL Y+ K+I+ PDW FT+ ++++ D  +++KL S M E+I 
Sbjct: 141  RPYFSKISHGCRSGRGHHSALKYITKDISNPDWWFTLIISRKLDTCILNKLFSIMGEKIQ 200

Query: 365  DNNLFSFIRCLFHARVLNLTFGCIPKGHGLPQEGVLSPILMNIYLDMLDREFFAICMRHE 544
            D  LF  I+ +F A+VLN+ FG   KGHGLPQEGVLSPILMNIYLD+ D E   + M++E
Sbjct: 201  DPCLFDMIQGMFDAQVLNMEFGGYLKGHGLPQEGVLSPILMNIYLDVFDHELHRLSMKYE 260

Query: 545  GLG--LHAGASKGGQHSMLRSWIRRQRDSADSGKELINGSDVRIYACRYMDEIFVAVSGS 718
             L   +H G  +   HS LRSW RRQ    D       GS  RI++CR+MDE+F AVSGS
Sbjct: 261  ALNPDVHFGGEQ--LHSKLRSWFRRQLKGNDIKNSSKEGS--RIHSCRFMDELFFAVSGS 316

Query: 719  KDVALSVKTDITNYLRLFLNLDVIDCSDILPMHDRSCVQFLGTIIRVTAEESEAVKAVHK 898
            KDVA+  K+D+ NYL   L+LDV   ++ILP      + FLGT+IR T +ES A++A HK
Sbjct: 317  KDVAIDFKSDVVNYLHNCLHLDVDSEAEILPSAGPQAICFLGTLIRRTVKESPAIRAAHK 376

Query: 899  LKDKVRLFASQKKE 940
            LK+KV+LFASQK+E
Sbjct: 377  LKEKVKLFASQKQE 390


>ref|XP_002527885.1| RNA binding protein, putative [Ricinus communis]
           gi|223532736|gb|EEF34516.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 715

 Score =  325 bits (834), Expect = 7e-87
 Identities = 162/313 (51%), Positives = 224/313 (71%)
 Frame = +2

Query: 2   SEREDLSFASMAEQLASGNFDVNANSICLFSKSERKECLVLPRLKLKVIEEAIRVVLEIV 181
           S+  ++ F  MAE+LASGNFDV+AN+  + ++  +KE LVLP+LKLKV++EAIR+VLE+V
Sbjct: 55  SDNGNICFEHMAEELASGNFDVSANTFSISTRGVKKETLVLPKLKLKVVQEAIRIVLEVV 114

Query: 182 YRPFFSKISHGCRSGRGHLSALSYVCKEINKPDWCFTICMNKEADDSVISKLISTMEERI 361
           Y+P FS+ISHGCRSGRGH +AL Y+ KEI+ PDW FT+ +NK+ D SVI+KLIS +E++I
Sbjct: 115 YKPHFSRISHGCRSGRGHHTALKYISKEISNPDWWFTLIINKKLDASVINKLISILEDKI 174

Query: 362 IDNNLFSFIRCLFHARVLNLTFGCIPKGHGLPQEGVLSPILMNIYLDMLDREFFAICMRH 541
            D  L+  +R ++ A+ LN+ FG  PKGHGLPQEGVLSPIL+NIY  + D E   + M++
Sbjct: 175 EDPYLYDILRGMYDAQALNVEFGGYPKGHGLPQEGVLSPILINIYFSVFDSEIDRLSMKY 234

Query: 542 EGLGLHAGASKGGQHSMLRSWIRRQRDSADSGKELINGSDVRIYACRYMDEIFVAVSGSK 721
           E L      +   ++S LR+W RRQ    D           RIY+CR+MDE+F AVSG++
Sbjct: 235 EALNSSLNVNGEQRNSKLRNWFRRQIKGNDLKNVAEESFSPRIYSCRFMDELFFAVSGTE 294

Query: 722 DVALSVKTDITNYLRLFLNLDVIDCSDILPMHDRSCVQFLGTIIRVTAEESEAVKAVHKL 901
           DVA S K++I +YL+  L LDV   ++I+P      ++FLG +IR   ++S AV+AVHKL
Sbjct: 295 DVARSFKSEIADYLQKILLLDVASETEIVPFSGPQAIRFLGNLIRKRVKDSPAVRAVHKL 354

Query: 902 KDKVRLFASQKKE 940
           KDKV+ FASQK+E
Sbjct: 355 KDKVQAFASQKQE 367


Top