BLASTX nr result

ID: Dioscorea21_contig00018925 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00018925
         (646 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ89345.1| predicted protein [Hordeum vulgare subsp. vulgare]    234   1e-59
dbj|BAJ87620.1| predicted protein [Hordeum vulgare subsp. vulgare]    229   3e-58
ref|XP_002456629.1| hypothetical protein SORBIDRAFT_03g039710 [S...   228   7e-58
gb|AFW84610.1| putative regulator of chromosome condensation (RC...   227   1e-57
gb|AFW84609.1| putative regulator of chromosome condensation (RC...   227   1e-57

>dbj|BAJ89345.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 500

 Score =  234 bits (596), Expect = 1e-59
 Identities = 117/175 (66%), Positives = 136/175 (77%), Gaps = 8/175 (4%)
 Frame = -2

Query: 645 LLYPVAVSLPGSLISGDSWKDVCGGGCGFAMAISESGKLLTWGSTDDMGQSYLTSGKHEE 466
           LL PV V LP +  +GD+W+DVCGGGCGFAMAISESGKLLTWGSTDDMGQSY+T+GKHEE
Sbjct: 54  LLGPVPVRLPPAA-AGDAWRDVCGGGCGFAMAISESGKLLTWGSTDDMGQSYVTAGKHEE 112

Query: 465 IPEAYPLPTQVAIVKAAAGWAHCVAVTAHGDVYTWGWKECVPSGRVIVDQTMEWAIEKDE 286
            PEA+PLP+ VAI +A AGWAHCVA+T  G VYTWGWKECVP+GRVI DQ     +EKDE
Sbjct: 113 TPEAFPLPSDVAIARADAGWAHCVAITDEGVVYTWGWKECVPTGRVIADQASVGTLEKDE 172

Query: 285 K-------EVKSRSNVSR-ASGVPVSSSETRGGEESAKRRKLSSTKQGQESSTSG 145
           +       +V  RS VSR +SG     SE+RG E+S KRR+LSS KQG +SSTSG
Sbjct: 173 RQSASANDQVSPRSQVSRTSSGAASGPSESRGTEDSTKRRRLSSAKQGNDSSTSG 227


>dbj|BAJ87620.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 511

 Score =  229 bits (585), Expect = 3e-58
 Identities = 117/186 (62%), Positives = 136/186 (73%), Gaps = 19/186 (10%)
 Frame = -2

Query: 645 LLYPVAVSLPGSLISGDSWKDVCGGGCGFAMAISESGKLLTWGSTDDMGQSYLTSGKHEE 466
           LL PV V LP +  +GD+W+DVCGGGCGFAMAISESGKLLTWGSTDDMGQSY+T+GKHEE
Sbjct: 54  LLGPVPVRLPPAA-AGDAWRDVCGGGCGFAMAISESGKLLTWGSTDDMGQSYVTAGKHEE 112

Query: 465 IPEAYPLPTQVAIVKAAAGWAHCVAVTAHGDVYTWGWKECVPSGRVIVDQTMEWAIEKDE 286
            PEA+PLP+ VAI +A AGWAHCVA+T  G VYTWGWKECVP+GRVI DQ     +EKDE
Sbjct: 113 TPEAFPLPSDVAIARADAGWAHCVAITDEGVVYTWGWKECVPTGRVIADQASVGTLEKDE 172

Query: 285 KE------------------VKSRSNVSR-ASGVPVSSSETRGGEESAKRRKLSSTKQGQ 163
           ++                  V  RS VSR +SG     SE+RG E+S KRR+LSS KQG 
Sbjct: 173 RQSASANDQGISHNKGNSIAVSPRSQVSRTSSGAASGPSESRGTEDSTKRRRLSSAKQGN 232

Query: 162 ESSTSG 145
           +SSTSG
Sbjct: 233 DSSTSG 238


>ref|XP_002456629.1| hypothetical protein SORBIDRAFT_03g039710 [Sorghum bicolor]
           gi|241928604|gb|EES01749.1| hypothetical protein
           SORBIDRAFT_03g039710 [Sorghum bicolor]
          Length = 503

 Score =  228 bits (581), Expect = 7e-58
 Identities = 115/176 (65%), Positives = 134/176 (76%), Gaps = 10/176 (5%)
 Frame = -2

Query: 645 LLYPVAVSLP--GSLISGDSWKDVCGGGCGFAMAISESGKLLTWGSTDDMGQSYLTSGKH 472
           LL PV V LP   +  +GD W+DVCGGGCGFAMAISESGKLLTWGS DDMGQSY+T+GKH
Sbjct: 52  LLGPVPVRLPPAAAAAAGDGWRDVCGGGCGFAMAISESGKLLTWGSADDMGQSYVTAGKH 111

Query: 471 EEIPEAYPLPTQVAIVKAAAGWAHCVAVTAHGDVYTWGWKECVPSGRVIVDQTMEWAIEK 292
           EE PEA+PLP+ VAIV+A AGWAHCVA+T  GDVYTWGWKECVP+GRVI DQ+    +EK
Sbjct: 112 EETPEAFPLPSGVAIVRADAGWAHCVAITDEGDVYTWGWKECVPTGRVIGDQSSVGTMEK 171

Query: 291 DEK-------EVKSRSNVSR-ASGVPVSSSETRGGEESAKRRKLSSTKQGQESSTS 148
           DE+       +V  RS VSR +SG      E+RG ++S KRR+LSS K G ESSTS
Sbjct: 172 DERQMAMATDQVSPRSQVSRTSSGAASGPPESRGTDDSTKRRRLSSAKHGPESSTS 227


>gb|AFW84610.1| putative regulator of chromosome condensation (RCC1) family protein
           [Zea mays]
          Length = 588

 Score =  227 bits (579), Expect = 1e-57
 Identities = 115/176 (65%), Positives = 133/176 (75%), Gaps = 10/176 (5%)
 Frame = -2

Query: 645 LLYPVAVSLP--GSLISGDSWKDVCGGGCGFAMAISESGKLLTWGSTDDMGQSYLTSGKH 472
           LL PV V LP   +  +GD W+DVCGGGCGFAMAISESGKLLTWGS DDMGQSY+T+GKH
Sbjct: 139 LLGPVPVRLPPTAATAAGDGWRDVCGGGCGFAMAISESGKLLTWGSADDMGQSYVTAGKH 198

Query: 471 EEIPEAYPLPTQVAIVKAAAGWAHCVAVTAHGDVYTWGWKECVPSGRVIVDQTMEWAIEK 292
           EE PEA+PLP+ V IV+A AGWAHCVA+T   DVYTWGWKECVP+GRVI DQ+    +EK
Sbjct: 199 EETPEAFPLPSSVVIVRADAGWAHCVAITDEYDVYTWGWKECVPTGRVIGDQSSVGTMEK 258

Query: 291 DEK-------EVKSRSNVSR-ASGVPVSSSETRGGEESAKRRKLSSTKQGQESSTS 148
           DE+       +V  RS VSR +SG    SSE+RG ++S KRRKLS  K G ESSTS
Sbjct: 259 DERQMAMATDQVSPRSQVSRTSSGAAAGSSESRGTDDSTKRRKLSLAKHGPESSTS 314


>gb|AFW84609.1| putative regulator of chromosome condensation (RCC1) family protein
           [Zea mays]
          Length = 552

 Score =  227 bits (579), Expect = 1e-57
 Identities = 115/176 (65%), Positives = 133/176 (75%), Gaps = 10/176 (5%)
 Frame = -2

Query: 645 LLYPVAVSLP--GSLISGDSWKDVCGGGCGFAMAISESGKLLTWGSTDDMGQSYLTSGKH 472
           LL PV V LP   +  +GD W+DVCGGGCGFAMAISESGKLLTWGS DDMGQSY+T+GKH
Sbjct: 139 LLGPVPVRLPPTAATAAGDGWRDVCGGGCGFAMAISESGKLLTWGSADDMGQSYVTAGKH 198

Query: 471 EEIPEAYPLPTQVAIVKAAAGWAHCVAVTAHGDVYTWGWKECVPSGRVIVDQTMEWAIEK 292
           EE PEA+PLP+ V IV+A AGWAHCVA+T   DVYTWGWKECVP+GRVI DQ+    +EK
Sbjct: 199 EETPEAFPLPSSVVIVRADAGWAHCVAITDEYDVYTWGWKECVPTGRVIGDQSSVGTMEK 258

Query: 291 DEK-------EVKSRSNVSR-ASGVPVSSSETRGGEESAKRRKLSSTKQGQESSTS 148
           DE+       +V  RS VSR +SG    SSE+RG ++S KRRKLS  K G ESSTS
Sbjct: 259 DERQMAMATDQVSPRSQVSRTSSGAAAGSSESRGTDDSTKRRKLSLAKHGPESSTS 314


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