BLASTX nr result

ID: Dioscorea21_contig00018906 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00018906
         (298 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307978.1| predicted protein [Populus trichocarpa] gi|2...    69   5e-10
ref|XP_003572803.1| PREDICTED: protein FAR1-RELATED SEQUENCE 4-l...    60   2e-07
ref|XP_002307977.1| predicted protein [Populus trichocarpa] gi|2...    56   3e-06
ref|XP_003576263.1| PREDICTED: protein FAR1-RELATED SEQUENCE 2-l...    55   8e-06

>ref|XP_002307978.1| predicted protein [Populus trichocarpa] gi|222853954|gb|EEE91501.1|
           predicted protein [Populus trichocarpa]
          Length = 470

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 34/76 (44%), Positives = 47/76 (61%)
 Frame = +1

Query: 70  KEKEQLTQPKDSLPSKIVPTAGMVFNSEQQVYNFYIEYARQEGFGITKNRTRSGDDGKLK 249
           KE E +    +  P    P+ GMVFN+  +V ++Y EYA   GF   K  T+SGDDG +K
Sbjct: 16  KESEGVGNDDEMKP----PSIGMVFNTPDEVRSYYDEYACHVGFNTIKKSTKSGDDGNVK 71

Query: 250 YYTLACVKSGKRISTA 297
           Y+TLAC +SGK + +A
Sbjct: 72  YFTLACSRSGKELPSA 87


>ref|XP_003572803.1| PREDICTED: protein FAR1-RELATED SEQUENCE 4-like [Brachypodium
           distachyon]
          Length = 573

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 28/61 (45%), Positives = 38/61 (62%)
 Frame = +1

Query: 100 DSLPSKIVPTAGMVFNSEQQVYNFYIEYARQEGFGITKNRTRSGDDGKLKYYTLACVKSG 279
           DSL  +  P  G++F+SE     FY  YA+ +GFG+ +   R GDD KL Y+TLAC + G
Sbjct: 33  DSLDGQ--PKKGIMFDSEDDAVRFYKGYAKTKGFGVVRRTARHGDDRKLNYFTLACSRQG 90

Query: 280 K 282
           K
Sbjct: 91  K 91


>ref|XP_002307977.1| predicted protein [Populus trichocarpa] gi|222853953|gb|EEE91500.1|
           predicted protein [Populus trichocarpa]
          Length = 536

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 24/53 (45%), Positives = 36/53 (67%)
 Frame = +1

Query: 124 PTAGMVFNSEQQVYNFYIEYARQEGFGITKNRTRSGDDGKLKYYTLACVKSGK 282
           P  GMVF S+++V ++Y  YA++ GFGI +  +R  DDG+L Y  L+C + GK
Sbjct: 44  PKIGMVFASQEEVRDYYNRYAQRVGFGIMRRSSRCDDDGRLTYIVLSCSQCGK 96


>ref|XP_003576263.1| PREDICTED: protein FAR1-RELATED SEQUENCE 2-like [Brachypodium
           distachyon]
          Length = 561

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 24/58 (41%), Positives = 35/58 (60%)
 Frame = +1

Query: 124 PTAGMVFNSEQQVYNFYIEYARQEGFGITKNRTRSGDDGKLKYYTLACVKSGKRISTA 297
           P  GM F++E  V  +Y  YA+ +GFG+T+  +   D+G+LKY TL C   GK  S +
Sbjct: 49  PELGMTFDTENDVRQYYKNYAKAKGFGVTRRSSNRDDNGQLKYLTLCCSCHGKTESNS 106


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