BLASTX nr result

ID: Dioscorea21_contig00018901 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00018901
         (361 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAO23078.1| polyprotein [Glycine max]                               88   8e-16
ref|XP_003537304.1| PREDICTED: uncharacterized protein LOC100816...    81   1e-13
ref|XP_003555002.1| PREDICTED: uncharacterized protein LOC100810...    78   6e-13
ref|XP_002333289.1| predicted protein [Populus trichocarpa] gi|2...    63   3e-08
ref|XP_003553022.1| PREDICTED: uncharacterized protein LOC100788...    61   8e-08

>gb|AAO23078.1| polyprotein [Glycine max]
          Length = 1552

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 49/119 (41%), Positives = 69/119 (57%)
 Frame = -1

Query: 361 HRCQNKRXXXXXXXXXXXEAKDNDTGEFLVELEQNSEGNEEVSSPKSSMNAMNSAIVSGT 182
           H+C N++             ++ D  +   ++    E N +  +   S+NAM  +   GT
Sbjct: 338 HKCPNRQVMLLQL-------EETDEDQTDEQVMVTEEANMDDDTHHLSLNAMRGSNGVGT 390

Query: 181 MRFTGHIKGQAVKILLDGGSDDNFIQPRVAEFLKLDVQPTNSFKVLVGDGNSLQVEGKV 5
           +RFTG + G AVKIL+DGGS DNFIQPRVA+ LKL V+P  + +VLVG+G  L  EG V
Sbjct: 391 IRFTGQVGGIAVKILVDGGSSDNFIQPRVAQVLKLPVEPAPNLRVLVGNGQILSAEGIV 449


>ref|XP_003537304.1| PREDICTED: uncharacterized protein LOC100816964 [Glycine max]
          Length = 751

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 38/70 (54%), Positives = 51/70 (72%)
 Frame = -1

Query: 220 SMNAMNSAIVSGTMRFTGHIKGQAVKILLDGGSDDNFIQPRVAEFLKLDVQPTNSFKVLV 41
           S NA+  +   GTM+F+  I G  V+ILLD GS DNF+QPR+A  LKL ++P ++F+VLV
Sbjct: 368 SYNALKGSSDLGTMKFSSTINGMVVQILLDSGSSDNFLQPRIANCLKLPIEPASNFQVLV 427

Query: 40  GDGNSLQVEG 11
           G+GNSL  EG
Sbjct: 428 GNGNSLVAEG 437


>ref|XP_003555002.1| PREDICTED: uncharacterized protein LOC100810380 [Glycine max]
          Length = 1273

 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 41/104 (39%), Positives = 62/104 (59%), Gaps = 6/104 (5%)
 Frame = -1

Query: 298 DNDTGEF-----LVELEQNSEGNEEVSSPKS-SMNAMNSAIVSGTMRFTGHIKGQAVKIL 137
           ++D GE      +V  + NS     + +P   S+NA+   +  GT+RF  HI    VK+L
Sbjct: 270 EDDKGEAEMSFDVVSRDNNSIAETVIDNPHHLSLNALKGGLGGGTIRFVAHINTLPVKVL 329

Query: 136 LDGGSDDNFIQPRVAEFLKLDVQPTNSFKVLVGDGNSLQVEGKV 5
           +D GS DNF+QPRVA+F KL ++P+  FKV+V +GN +   G +
Sbjct: 330 VDNGSSDNFLQPRVAKFFKLPIEPSPLFKVMVDNGNYMTPIGMI 373


>ref|XP_002333289.1| predicted protein [Populus trichocarpa] gi|222835888|gb|EEE74309.1|
           predicted protein [Populus trichocarpa]
          Length = 425

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 38/120 (31%), Positives = 63/120 (52%)
 Frame = -1

Query: 361 HRCQNKRXXXXXXXXXXXEAKDNDTGEFLVELEQNSEGNEEVSSPKSSMNAMNSAIVSGT 182
           H+CQ  R              D++T    ++ ++  EG+E    P+ S++A+    ++ T
Sbjct: 304 HKCQKPRLLLLEG--------DDETS---LQDDEEFEGDE----PQISLHAITGWSIART 348

Query: 181 MRFTGHIKGQAVKILLDGGSDDNFIQPRVAEFLKLDVQPTNSFKVLVGDGNSLQVEGKVD 2
           MR    I+ Q + +L+D GS  NFI  R+A +L L V PT  F V V +GN L+ +G+ +
Sbjct: 349 MRIMARIENQDLTVLIDSGSTHNFISERIANWLHLPVIPTQPFNVKVANGNPLKCQGRFE 408


>ref|XP_003553022.1| PREDICTED: uncharacterized protein LOC100788433 [Glycine max]
          Length = 1433

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 29/67 (43%), Positives = 41/67 (61%)
 Frame = -1

Query: 232 SPKSSMNAMNSAIVSGTMRFTGHIKGQAVKILLDGGSDDNFIQPRVAEFLKLDVQPTNSF 53
           +P  S+NA++      T R  G+I    + +L+D GS  NF+QPR+A FL L   PTN  
Sbjct: 333 TPHISLNALSGLPTPETFRLFGYINHTRITVLIDSGSTHNFLQPRLATFLHLPTVPTNPL 392

Query: 52  KVLVGDG 32
           +VLVG+G
Sbjct: 393 RVLVGNG 399


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