BLASTX nr result
ID: Dioscorea21_contig00018898
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00018898 (427 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003553589.1| PREDICTED: uncharacterized protein LOC100814... 62 4e-08 ref|XP_002881441.1| hypothetical protein ARALYDRAFT_482616 [Arab... 60 1e-07 gb|ADL36702.1| GRF domain class transcription factor [Malus x do... 60 2e-07 ref|XP_002534110.1| conserved hypothetical protein [Ricinus comm... 58 7e-07 ref|NP_181181.1| growth-regulating factor 3 [Arabidopsis thalian... 58 7e-07 >ref|XP_003553589.1| PREDICTED: uncharacterized protein LOC100814842 [Glycine max] Length = 388 Score = 62.4 bits (150), Expect = 4e-08 Identities = 40/128 (31%), Positives = 61/128 (47%) Frame = +1 Query: 43 QQWGSQQESDQHQNQAKVSKLQLMTDEQEIHASALPLFSATPINHXXXXXXXXXXXXXXD 222 ++W +Q ES++ Q+ K+ KL + Q+ A+ALPLF P + Sbjct: 6 KEWRNQHESEEQQHSTKMPKLLPESHHQQPSATALPLFVPEPNSSSKVSTLSDSTLAAET 65 Query: 223 SSHTSRFSWGAGGGMVGLFSXXXXXXXXXXXXIYKYMLAGAPVPLDLILPIRKSLLSAHP 402 + T+ + M FS I++YMLAGA VP +L+ PI+KSLL + Sbjct: 66 ETMTTTTTNRLFPRMGSYFSLSQWQELELQALIFRYMLAGAAVPPELLQPIKKSLLHSPH 125 Query: 403 CYHHHQLQ 426 + HH LQ Sbjct: 126 YFLHHPLQ 133 >ref|XP_002881441.1| hypothetical protein ARALYDRAFT_482616 [Arabidopsis lyrata subsp. lyrata] gi|297327280|gb|EFH57700.1| hypothetical protein ARALYDRAFT_482616 [Arabidopsis lyrata subsp. lyrata] Length = 396 Score = 60.5 bits (145), Expect = 1e-07 Identities = 45/133 (33%), Positives = 64/133 (48%), Gaps = 5/133 (3%) Frame = +1 Query: 43 QQWGSQQESDQHQNQAKVSKL-QLMTDEQEIHAS---ALPLFSATPINHXXXXXXXXXXX 210 +QW SQQ+ + + Q +K+ + + D+ + H++ ALPLF+ P + Sbjct: 6 KQWRSQQQQTESEEQPSAAKIPKHVFDQIQSHSATSTALPLFAPEPTSSKLSSL------ 59 Query: 211 XXXDSSHTSRFSWGAGGGMVGLFSXXXXXXXXXXXXIYKYMLAGAPVPLDLILPIRKSLL 390 +SRF M FS IY+YMLAGA VP +L+LPI+KSLL Sbjct: 60 ---SPESSSRFP-----KMGSFFSWAQWQELELQALIYRYMLAGAAVPQELLLPIKKSLL 111 Query: 391 SAHPCYH-HHQLQ 426 P Y HH LQ Sbjct: 112 HLSPSYFLHHPLQ 124 >gb|ADL36702.1| GRF domain class transcription factor [Malus x domestica] Length = 394 Score = 59.7 bits (143), Expect = 2e-07 Identities = 47/131 (35%), Positives = 58/131 (44%), Gaps = 3/131 (2%) Frame = +1 Query: 43 QQWGSQQESDQHQNQAKVSKLQL---MTDEQEIHASALPLFSATPINHXXXXXXXXXXXX 213 +QW +QQ + Q+ AK+ KL L E ALPLF P Sbjct: 6 EQWRTQQHESEEQHSAKIPKLDLDPHQNSELPSAGYALPLFVPEP------NTKILSAAF 59 Query: 214 XXDSSHTSRFSWGAGGGMVGLFSXXXXXXXXXXXXIYKYMLAGAPVPLDLILPIRKSLLS 393 S TSRF G FS I++YM+AGA VP +L+ PIRKSL S Sbjct: 60 SESSPATSRFPKEMGS----YFSLSQWQELELQALIFRYMVAGAAVPPELLQPIRKSLHS 115 Query: 394 AHPCYHHHQLQ 426 A P + HH LQ Sbjct: 116 A-PYFLHHPLQ 125 >ref|XP_002534110.1| conserved hypothetical protein [Ricinus communis] gi|223525833|gb|EEF28270.1| conserved hypothetical protein [Ricinus communis] Length = 428 Score = 58.2 bits (139), Expect = 7e-07 Identities = 46/143 (32%), Positives = 64/143 (44%), Gaps = 15/143 (10%) Frame = +1 Query: 43 QQWGSQQ---ESDQHQNQAKVSKLQL------MTDEQEIH------ASALPLFSATPINH 177 +QW +QQ E ++ Q K+ KL L EQ+ + A+ LPLF P ++ Sbjct: 6 KQWRNQQHESEEEEEQPSEKMPKLLLDPPHEPQQQEQQHYPISGSTAAPLPLFVPEPHSN 65 Query: 178 XXXXXXXXXXXXXXDSSHTSRFSWGAGGGMVGLFSXXXXXXXXXXXXIYKYMLAGAPVPL 357 T+RF G G FS IY+YMLAGA +P Sbjct: 66 NKNSNLSAFLDSSTAPPATARFPRMGGSGY---FSLAQWQELELQALIYRYMLAGAAIPP 122 Query: 358 DLILPIRKSLLSAHPCYHHHQLQ 426 +L+ PI+KSLL + P + HH LQ Sbjct: 123 ELLQPIKKSLLHSPPYFLHHPLQ 145 >ref|NP_181181.1| growth-regulating factor 3 [Arabidopsis thaliana] gi|75206320|sp|Q9SJR5.1|GRF3_ARATH RecName: Full=Growth-regulating factor 3; Short=AtGRF3; AltName: Full=Transcription activator GRF3 gi|4581140|gb|AAD24624.1| unknown protein [Arabidopsis thaliana] gi|21539884|gb|AAM52878.1| transcription activator [Arabidopsis thaliana] gi|111074412|gb|ABH04579.1| At2g36400 [Arabidopsis thaliana] gi|330254154|gb|AEC09248.1| growth-regulating factor 3 [Arabidopsis thaliana] Length = 398 Score = 58.2 bits (139), Expect = 7e-07 Identities = 50/134 (37%), Positives = 64/134 (47%), Gaps = 4/134 (2%) Frame = +1 Query: 37 SSQQWGSQQESDQHQNQAKVSKLQLMTDEQEIH---ASALPLFSATPINHXXXXXXXXXX 207 S QQ Q ES++ + AK+ K + D+ H ++ALPLF+ P + Sbjct: 10 SQQQQQHQTESEEQPSAAKIPKH--VFDQIHSHTATSTALPLFTPEPTSSKLSSLSP--- 64 Query: 208 XXXXDSSHTSRFSWGAGGGMVGLFSXXXXXXXXXXXXIYKYMLAGAPVPLDLILPIRKSL 387 DSS SRF M FS IY+YMLAGA VP +L+LPI+KSL Sbjct: 65 ----DSS--SRFP-----KMGSFFSWAQWQELELQALIYRYMLAGAAVPQELLLPIKKSL 113 Query: 388 LSAHPCYH-HHQLQ 426 L P Y HH LQ Sbjct: 114 LHLSPSYFLHHPLQ 127