BLASTX nr result

ID: Dioscorea21_contig00018898 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00018898
         (427 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003553589.1| PREDICTED: uncharacterized protein LOC100814...    62   4e-08
ref|XP_002881441.1| hypothetical protein ARALYDRAFT_482616 [Arab...    60   1e-07
gb|ADL36702.1| GRF domain class transcription factor [Malus x do...    60   2e-07
ref|XP_002534110.1| conserved hypothetical protein [Ricinus comm...    58   7e-07
ref|NP_181181.1| growth-regulating factor 3 [Arabidopsis thalian...    58   7e-07

>ref|XP_003553589.1| PREDICTED: uncharacterized protein LOC100814842 [Glycine max]
          Length = 388

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 40/128 (31%), Positives = 61/128 (47%)
 Frame = +1

Query: 43  QQWGSQQESDQHQNQAKVSKLQLMTDEQEIHASALPLFSATPINHXXXXXXXXXXXXXXD 222
           ++W +Q ES++ Q+  K+ KL   +  Q+  A+ALPLF   P +                
Sbjct: 6   KEWRNQHESEEQQHSTKMPKLLPESHHQQPSATALPLFVPEPNSSSKVSTLSDSTLAAET 65

Query: 223 SSHTSRFSWGAGGGMVGLFSXXXXXXXXXXXXIYKYMLAGAPVPLDLILPIRKSLLSAHP 402
            + T+  +      M   FS            I++YMLAGA VP +L+ PI+KSLL +  
Sbjct: 66  ETMTTTTTNRLFPRMGSYFSLSQWQELELQALIFRYMLAGAAVPPELLQPIKKSLLHSPH 125

Query: 403 CYHHHQLQ 426
            + HH LQ
Sbjct: 126 YFLHHPLQ 133


>ref|XP_002881441.1| hypothetical protein ARALYDRAFT_482616 [Arabidopsis lyrata subsp.
           lyrata] gi|297327280|gb|EFH57700.1| hypothetical protein
           ARALYDRAFT_482616 [Arabidopsis lyrata subsp. lyrata]
          Length = 396

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 45/133 (33%), Positives = 64/133 (48%), Gaps = 5/133 (3%)
 Frame = +1

Query: 43  QQWGSQQESDQHQNQAKVSKL-QLMTDEQEIHAS---ALPLFSATPINHXXXXXXXXXXX 210
           +QW SQQ+  + + Q   +K+ + + D+ + H++   ALPLF+  P +            
Sbjct: 6   KQWRSQQQQTESEEQPSAAKIPKHVFDQIQSHSATSTALPLFAPEPTSSKLSSL------ 59

Query: 211 XXXDSSHTSRFSWGAGGGMVGLFSXXXXXXXXXXXXIYKYMLAGAPVPLDLILPIRKSLL 390
                  +SRF       M   FS            IY+YMLAGA VP +L+LPI+KSLL
Sbjct: 60  ---SPESSSRFP-----KMGSFFSWAQWQELELQALIYRYMLAGAAVPQELLLPIKKSLL 111

Query: 391 SAHPCYH-HHQLQ 426
              P Y  HH LQ
Sbjct: 112 HLSPSYFLHHPLQ 124


>gb|ADL36702.1| GRF domain class transcription factor [Malus x domestica]
          Length = 394

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 47/131 (35%), Positives = 58/131 (44%), Gaps = 3/131 (2%)
 Frame = +1

Query: 43  QQWGSQQESDQHQNQAKVSKLQL---MTDEQEIHASALPLFSATPINHXXXXXXXXXXXX 213
           +QW +QQ   + Q+ AK+ KL L      E      ALPLF   P               
Sbjct: 6   EQWRTQQHESEEQHSAKIPKLDLDPHQNSELPSAGYALPLFVPEP------NTKILSAAF 59

Query: 214 XXDSSHTSRFSWGAGGGMVGLFSXXXXXXXXXXXXIYKYMLAGAPVPLDLILPIRKSLLS 393
              S  TSRF    G      FS            I++YM+AGA VP +L+ PIRKSL S
Sbjct: 60  SESSPATSRFPKEMGS----YFSLSQWQELELQALIFRYMVAGAAVPPELLQPIRKSLHS 115

Query: 394 AHPCYHHHQLQ 426
           A P + HH LQ
Sbjct: 116 A-PYFLHHPLQ 125


>ref|XP_002534110.1| conserved hypothetical protein [Ricinus communis]
           gi|223525833|gb|EEF28270.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 428

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 46/143 (32%), Positives = 64/143 (44%), Gaps = 15/143 (10%)
 Frame = +1

Query: 43  QQWGSQQ---ESDQHQNQAKVSKLQL------MTDEQEIH------ASALPLFSATPINH 177
           +QW +QQ   E ++ Q   K+ KL L         EQ+ +      A+ LPLF   P ++
Sbjct: 6   KQWRNQQHESEEEEEQPSEKMPKLLLDPPHEPQQQEQQHYPISGSTAAPLPLFVPEPHSN 65

Query: 178 XXXXXXXXXXXXXXDSSHTSRFSWGAGGGMVGLFSXXXXXXXXXXXXIYKYMLAGAPVPL 357
                             T+RF    G G    FS            IY+YMLAGA +P 
Sbjct: 66  NKNSNLSAFLDSSTAPPATARFPRMGGSGY---FSLAQWQELELQALIYRYMLAGAAIPP 122

Query: 358 DLILPIRKSLLSAHPCYHHHQLQ 426
           +L+ PI+KSLL + P + HH LQ
Sbjct: 123 ELLQPIKKSLLHSPPYFLHHPLQ 145


>ref|NP_181181.1| growth-regulating factor 3 [Arabidopsis thaliana]
           gi|75206320|sp|Q9SJR5.1|GRF3_ARATH RecName:
           Full=Growth-regulating factor 3; Short=AtGRF3; AltName:
           Full=Transcription activator GRF3
           gi|4581140|gb|AAD24624.1| unknown protein [Arabidopsis
           thaliana] gi|21539884|gb|AAM52878.1| transcription
           activator [Arabidopsis thaliana]
           gi|111074412|gb|ABH04579.1| At2g36400 [Arabidopsis
           thaliana] gi|330254154|gb|AEC09248.1| growth-regulating
           factor 3 [Arabidopsis thaliana]
          Length = 398

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 50/134 (37%), Positives = 64/134 (47%), Gaps = 4/134 (2%)
 Frame = +1

Query: 37  SSQQWGSQQESDQHQNQAKVSKLQLMTDEQEIH---ASALPLFSATPINHXXXXXXXXXX 207
           S QQ   Q ES++  + AK+ K   + D+   H   ++ALPLF+  P +           
Sbjct: 10  SQQQQQHQTESEEQPSAAKIPKH--VFDQIHSHTATSTALPLFTPEPTSSKLSSLSP--- 64

Query: 208 XXXXDSSHTSRFSWGAGGGMVGLFSXXXXXXXXXXXXIYKYMLAGAPVPLDLILPIRKSL 387
               DSS  SRF       M   FS            IY+YMLAGA VP +L+LPI+KSL
Sbjct: 65  ----DSS--SRFP-----KMGSFFSWAQWQELELQALIYRYMLAGAAVPQELLLPIKKSL 113

Query: 388 LSAHPCYH-HHQLQ 426
           L   P Y  HH LQ
Sbjct: 114 LHLSPSYFLHHPLQ 127


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