BLASTX nr result

ID: Dioscorea21_contig00018844 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00018844
         (446 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC98962.1| nucleic acid binding protein [Oryza sativa Japoni...   173   2e-41
ref|NP_001150003.1| PHD finger protein [Zea mays] gi|195635997|g...   173   2e-41
ref|NP_001045036.1| Os01g0887700 [Oryza sativa Japonica Group] g...   172   3e-41
ref|XP_003575168.1| PREDICTED: PHD finger protein ALFIN-LIKE 7-l...   172   3e-41
sp|A2WXR5.1|ALFL6_ORYSI RecName: Full=PHD finger protein ALFIN-L...   172   3e-41

>gb|AAC98962.1| nucleic acid binding protein [Oryza sativa Japonica Group]
          Length = 271

 Score =  173 bits (438), Expect = 2e-41
 Identities = 88/139 (63%), Positives = 102/139 (73%), Gaps = 3/139 (2%)
 Frame = +3

Query: 3   DPEKENLCLYGLPNETWDVTXXXXXXXXXXXXXXXGINFARDGMNDKDWLALVAVHSDAW 182
           DPEKENLCLYG PNETW+VT               GINFARDGMN+KDWLALVAVHSD+W
Sbjct: 60  DPEKENLCLYGYPNETWEVTLPAEEVPPEIPEPALGINFARDGMNEKDWLALVAVHSDSW 119

Query: 183 LLAVAFYFGARFGFDKEARRRLFNMINGLPTIYEVVTGTAKRQSQGREKTPXXXXXXXXX 362
           LL+VAFYFGARFGFD+EARRRLFNMIN LPTI+EVVTG AK+Q+  +EKTP         
Sbjct: 120 LLSVAFYFGARFGFDREARRRLFNMINNLPTIFEVVTGAAKKQA--KEKTPNSSSKSNKP 177

Query: 363 XXMQSQAKT---SKMAPPK 410
               S+A++   SK++ PK
Sbjct: 178 SSKVSKAESRSKSKLSAPK 196


>ref|NP_001150003.1| PHD finger protein [Zea mays] gi|195635997|gb|ACG37467.1| PHD
           finger protein [Zea mays] gi|413945388|gb|AFW78037.1|
           PHD finger protein [Zea mays]
          Length = 256

 Score =  173 bits (438), Expect = 2e-41
 Identities = 87/139 (62%), Positives = 98/139 (70%), Gaps = 3/139 (2%)
 Frame = +3

Query: 3   DPEKENLCLYGLPNETWDVTXXXXXXXXXXXXXXXGINFARDGMNDKDWLALVAVHSDAW 182
           DPEKENLCLYG PNETW+VT               GINFARDGMN+KDWLALVAVHSDAW
Sbjct: 44  DPEKENLCLYGYPNETWEVTLPAEEVPPEIPEPALGINFARDGMNEKDWLALVAVHSDAW 103

Query: 183 LLAVAFYFGARFGFDKEARRRLFNMINGLPTIYEVVTGTAKRQSQGRE---KTPXXXXXX 353
           LLAVAFYF ARFGFDKEARRRLFNMIN LPTI+EV TG AK+Q++ +E    +       
Sbjct: 104 LLAVAFYFAARFGFDKEARRRLFNMINNLPTIFEVATGVAKKQNKEKEPNNTSKSNKPSS 163

Query: 354 XXXXXMQSQAKTSKMAPPK 410
                 +S  K +K+APPK
Sbjct: 164 KMTTRPESHLKATKVAPPK 182


>ref|NP_001045036.1| Os01g0887700 [Oryza sativa Japonica Group]
           gi|75276135|sp|Q7F2Z1.1|ALFL6_ORYSJ RecName: Full=PHD
           finger protein ALFIN-LIKE 6 gi|4091117|gb|AAC98969.1|
           nucleic acid binding protein [Oryza sativa Japonica
           Group] gi|20804953|dbj|BAB92630.1| nucleic acid binding
           protein [Oryza sativa Japonica Group]
           gi|56785247|dbj|BAD82135.1| nucleic acid binding protein
           [Oryza sativa Japonica Group]
           gi|113534567|dbj|BAF06950.1| Os01g0887700 [Oryza sativa
           Japonica Group] gi|125572906|gb|EAZ14421.1| hypothetical
           protein OsJ_04343 [Oryza sativa Japonica Group]
          Length = 272

 Score =  172 bits (435), Expect = 3e-41
 Identities = 89/140 (63%), Positives = 104/140 (74%), Gaps = 4/140 (2%)
 Frame = +3

Query: 3   DPEKENLCLYGLPNETWDVTXXXXXXXXXXXXXXXGINFARDGMNDKDWLALVAVHSDAW 182
           DPEKENLCLYG PNETW+VT               GINFARDGMN+KDWLALVAVHSD+W
Sbjct: 60  DPEKENLCLYGYPNETWEVTLPAEEVPPEIPEPALGINFARDGMNEKDWLALVAVHSDSW 119

Query: 183 LLAVAFYFGARFGFDKEARRRLFNMINGLPTIYEVVTGTAKRQSQGREKTP-XXXXXXXX 359
           LL+VAFYFGARFGFD+EARRRLFNMIN LPTI+EVVTG AK+Q+  +EKTP         
Sbjct: 120 LLSVAFYFGARFGFDREARRRLFNMINNLPTIFEVVTGAAKKQA--KEKTPNSSSKSNKP 177

Query: 360 XXXMQSQAKT---SKMAPPK 410
              +QS+A++   SK++ PK
Sbjct: 178 SSKVQSKAESRSKSKLSAPK 197


>ref|XP_003575168.1| PREDICTED: PHD finger protein ALFIN-LIKE 7-like isoform 3
           [Brachypodium distachyon]
          Length = 260

 Score =  172 bits (435), Expect = 3e-41
 Identities = 85/139 (61%), Positives = 98/139 (70%), Gaps = 3/139 (2%)
 Frame = +3

Query: 3   DPEKENLCLYGLPNETWDVTXXXXXXXXXXXXXXXGINFARDGMNDKDWLALVAVHSDAW 182
           DPEKENLCLYGLPNETW+VT               GINFARDGM +KDWL+LVAVHSDAW
Sbjct: 50  DPEKENLCLYGLPNETWEVTLPAEEVPPELPEPALGINFARDGMIEKDWLSLVAVHSDAW 109

Query: 183 LLAVAFYFGARFGFDKEARRRLFNMINGLPTIYEVVTGTAKRQ---SQGREKTPXXXXXX 353
           LL+VAFYFGARFGFDKEARRRLF M+NGLPT+YE+VTG AK+Q   S G  K+       
Sbjct: 110 LLSVAFYFGARFGFDKEARRRLFTMVNGLPTVYEIVTGVAKKQPKPSNGGSKSSKSNSKV 169

Query: 354 XXXXXMQSQAKTSKMAPPK 410
                  S +K +K++ PK
Sbjct: 170 SIHSDSNSNSKPAKLSHPK 188


>sp|A2WXR5.1|ALFL6_ORYSI RecName: Full=PHD finger protein ALFIN-LIKE 6
           gi|125528647|gb|EAY76761.1| hypothetical protein
           OsI_04717 [Oryza sativa Indica Group]
          Length = 272

 Score =  172 bits (435), Expect = 3e-41
 Identities = 89/140 (63%), Positives = 104/140 (74%), Gaps = 4/140 (2%)
 Frame = +3

Query: 3   DPEKENLCLYGLPNETWDVTXXXXXXXXXXXXXXXGINFARDGMNDKDWLALVAVHSDAW 182
           DPEKENLCLYG PNETW+VT               GINFARDGMN+KDWLALVAVHSD+W
Sbjct: 60  DPEKENLCLYGYPNETWEVTLPAEEVPPEIPEPALGINFARDGMNEKDWLALVAVHSDSW 119

Query: 183 LLAVAFYFGARFGFDKEARRRLFNMINGLPTIYEVVTGTAKRQSQGREKTP-XXXXXXXX 359
           LL+VAFYFGARFGFD+EARRRLFNMIN LPTI+EVVTG AK+Q+  +EKTP         
Sbjct: 120 LLSVAFYFGARFGFDREARRRLFNMINNLPTIFEVVTGAAKKQA--KEKTPNSSSKSNKP 177

Query: 360 XXXMQSQAKT---SKMAPPK 410
              +QS+A++   SK++ PK
Sbjct: 178 SSKVQSKAESRSKSKLSAPK 197


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