BLASTX nr result

ID: Dioscorea21_contig00018816 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00018816
         (340 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24291.3| unnamed protein product [Vitis vinifera]              104   6e-21
ref|XP_002265928.1| PREDICTED: proteasome-associated protein ECM...   104   6e-21
emb|CAN63508.1| hypothetical protein VITISV_029436 [Vitis vinifera]   104   6e-21
ref|XP_003617203.1| Proteasome-associated protein ECM29-like pro...    99   5e-19
ref|XP_002299974.1| predicted protein [Populus trichocarpa] gi|2...    95   5e-18

>emb|CBI24291.3| unnamed protein product [Vitis vinifera]
          Length = 2456

 Score =  104 bits (260), Expect = 6e-21
 Identities = 57/105 (54%), Positives = 74/105 (70%), Gaps = 5/105 (4%)
 Frame = -3

Query: 302  GYSWTVKMSAFSTIKALCSKLSPVSKDKNEFSHDA--ISLIQEMFHSLTSKVLECIHTIK 129
            G+ WTVKMSAFS+IK LCS+L  +  +  E S D    SLI E+FHS++ KV+ECI T+K
Sbjct: 2330 GFPWTVKMSAFSSIKELCSRLHEIVDESEETSLDVGVTSLIYELFHSVSPKVVECISTVK 2389

Query: 128  ISQVHIAASECLLEVSKLYSKSPAL---DKGHEIKSELVHLLEVE 3
            I+QVHI ASECLLE+ +LY   P++   D G   K EL+HL E+E
Sbjct: 2390 IAQVHITASECLLEMIELYKNLPSVQWTDGG--FKDELLHLYEME 2432


>ref|XP_002265928.1| PREDICTED: proteasome-associated protein ECM29 homolog [Vitis
            vinifera]
          Length = 1813

 Score =  104 bits (260), Expect = 6e-21
 Identities = 57/105 (54%), Positives = 74/105 (70%), Gaps = 5/105 (4%)
 Frame = -3

Query: 302  GYSWTVKMSAFSTIKALCSKLSPVSKDKNEFSHDA--ISLIQEMFHSLTSKVLECIHTIK 129
            G+ WTVKMSAFS+IK LCS+L  +  +  E S D    SLI E+FHS++ KV+ECI T+K
Sbjct: 1687 GFPWTVKMSAFSSIKELCSRLHEIVDESEETSLDVGVTSLIYELFHSVSPKVVECISTVK 1746

Query: 128  ISQVHIAASECLLEVSKLYSKSPAL---DKGHEIKSELVHLLEVE 3
            I+QVHI ASECLLE+ +LY   P++   D G   K EL+HL E+E
Sbjct: 1747 IAQVHITASECLLEMIELYKNLPSVQWTDGG--FKDELLHLYEME 1789


>emb|CAN63508.1| hypothetical protein VITISV_029436 [Vitis vinifera]
          Length = 234

 Score =  104 bits (260), Expect = 6e-21
 Identities = 57/105 (54%), Positives = 74/105 (70%), Gaps = 5/105 (4%)
 Frame = -3

Query: 302 GYSWTVKMSAFSTIKALCSKLSPVSKDKNEFSHDA--ISLIQEMFHSLTSKVLECIHTIK 129
           G+ WTVKMSAFS+IK LCS+L  +  +  E S D    SLI E+FHS++ KV+ECI T+K
Sbjct: 108 GFPWTVKMSAFSSIKELCSRLHEIVDESEETSLDVGVTSLIYELFHSVSPKVVECISTVK 167

Query: 128 ISQVHIAASECLLEVSKLYSKSPAL---DKGHEIKSELVHLLEVE 3
           I+QVHI ASECLLE+ +LY   P++   D G   K EL+HL E+E
Sbjct: 168 IAQVHITASECLLEMIELYKNLPSVQWTDGG--FKDELLHLYEME 210


>ref|XP_003617203.1| Proteasome-associated protein ECM29-like protein [Medicago
            truncatula] gi|355518538|gb|AET00162.1|
            Proteasome-associated protein ECM29-like protein
            [Medicago truncatula]
          Length = 1976

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 53/102 (51%), Positives = 68/102 (66%), Gaps = 3/102 (2%)
 Frame = -3

Query: 299  YSWTVKMSAFSTIKALCSKLSPVSKDKNEFSHDA--ISLIQEMFHSLTSKVLECIHTIKI 126
            + WTVK +AF +IK LCS+L  V KD    +  A   SL+QEMFHS++ KVL CI TIKI
Sbjct: 1855 HKWTVKTTAFLSIKELCSRLHNVIKDSQGTNEHASVTSLVQEMFHSISPKVLHCISTIKI 1914

Query: 125  SQVHIAASECLLEVSKLYSKSPALDK-GHEIKSELVHLLEVE 3
            +QVH++ASECLLE+ KL    P +     E K EL+H  E+E
Sbjct: 1915 AQVHVSASECLLEIIKLAVAVPLVSAINEEFKEELLHQYEIE 1956


>ref|XP_002299974.1| predicted protein [Populus trichocarpa] gi|222847232|gb|EEE84779.1|
            predicted protein [Populus trichocarpa]
          Length = 1847

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 56/103 (54%), Positives = 70/103 (67%), Gaps = 3/103 (2%)
 Frame = -3

Query: 302  GYSWTVKMSAFSTIKALCSKLSP--VSKDKNEFSHD-AISLIQEMFHSLTSKVLECIHTI 132
            G+ WTVK+SAFS IK LCS+L    V   K    HD A S +QE+F+S++ K++ECI TI
Sbjct: 1728 GFQWTVKLSAFSLIKELCSRLQSILVEASKGASQHDSATSFVQELFYSVSPKIVECISTI 1787

Query: 131  KISQVHIAASECLLEVSKLYSKSPALDKGHEIKSELVHLLEVE 3
            KI+QVHI+ASECLLEV+ L S     D G   K EL+H  EVE
Sbjct: 1788 KIAQVHISASECLLEVTGLASVR-WTDVG--FKEELLHQYEVE 1827


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