BLASTX nr result

ID: Dioscorea21_contig00018800 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00018800
         (530 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316747.1| predicted protein [Populus trichocarpa] gi|2...    98   6e-22
ref|XP_002526919.1| conserved hypothetical protein [Ricinus comm...   100   1e-21
emb|CBI30774.3| unnamed protein product [Vitis vinifera]               95   2e-21
ref|XP_003546058.1| PREDICTED: pentatricopeptide repeat-containi...    95   4e-21
gb|ACU23441.1| unknown [Glycine max]                                   94   5e-21

>ref|XP_002316747.1| predicted protein [Populus trichocarpa] gi|222859812|gb|EEE97359.1|
           predicted protein [Populus trichocarpa]
          Length = 272

 Score = 97.8 bits (242), Expect(2) = 6e-22
 Identities = 43/66 (65%), Positives = 60/66 (90%)
 Frame = -3

Query: 528 HSRSISKRLFSRIISLYEHHHMPEKILEVFTDMEELGVRPDDDTVYRVGRAFEILGQSHK 349
           H+RS+SKRLFSR+ISLY+HH+M ++I+EVF DMEELGVRPD+DTV+RV RAF+ LGQ  K
Sbjct: 181 HTRSMSKRLFSRMISLYDHHNMQDEIIEVFADMEELGVRPDEDTVWRVARAFKKLGQEEK 240

Query: 348 KKMLMK 331
           ++++++
Sbjct: 241 RELVLE 246



 Score = 31.2 bits (69), Expect(2) = 6e-22
 Identities = 11/17 (64%), Positives = 15/17 (88%)
 Frame = -1

Query: 257 YRKRWRYLYFNGERVRV 207
           Y  +W+Y++FNGERVRV
Sbjct: 248 YLCKWKYIHFNGERVRV 264


>ref|XP_002526919.1| conserved hypothetical protein [Ricinus communis]
           gi|223533738|gb|EEF35472.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 224

 Score =  100 bits (249), Expect(2) = 1e-21
 Identities = 46/66 (69%), Positives = 58/66 (87%)
 Frame = -3

Query: 528 HSRSISKRLFSRIISLYEHHHMPEKILEVFTDMEELGVRPDDDTVYRVGRAFEILGQSHK 349
           H RSISKRLFSR+ISLY+HH+MP+ I+E+F DMEELGVRPD+DTV RV RAF+ LGQ  K
Sbjct: 134 HVRSISKRLFSRMISLYDHHNMPDGIIEIFADMEELGVRPDEDTVRRVARAFKELGQEEK 193

Query: 348 KKMLMK 331
           +K+++K
Sbjct: 194 QKLVLK 199



 Score = 27.7 bits (60), Expect(2) = 1e-21
 Identities = 11/23 (47%), Positives = 16/23 (69%), Gaps = 1/23 (4%)
 Frame = -1

Query: 257 YRKRWRYLYFNGER-VRVPAIEE 192
           Y  RW+Y++F GER  +V A +E
Sbjct: 201 YMSRWKYIHFKGERDAQVEAFQE 223


>emb|CBI30774.3| unnamed protein product [Vitis vinifera]
          Length = 277

 Score = 95.1 bits (235), Expect(2) = 2e-21
 Identities = 43/66 (65%), Positives = 57/66 (86%)
 Frame = -3

Query: 528 HSRSISKRLFSRIISLYEHHHMPEKILEVFTDMEELGVRPDDDTVYRVGRAFEILGQSHK 349
           H+RSISK+LFSR+ISLY+HH M +K++EVF DMEELGV+PD+DTV RV  AF+ LGQ  K
Sbjct: 185 HTRSISKQLFSRMISLYDHHDMRDKVIEVFADMEELGVKPDEDTVRRVACAFQTLGQEDK 244

Query: 348 KKMLMK 331
           +K+++K
Sbjct: 245 QKLVLK 250



 Score = 32.3 bits (72), Expect(2) = 2e-21
 Identities = 11/17 (64%), Positives = 16/17 (94%)
 Frame = -1

Query: 257 YRKRWRYLYFNGERVRV 207
           Y+ +W+Y++FNGERVRV
Sbjct: 252 YQCKWKYIHFNGERVRV 268


>ref|XP_003546058.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18975,
           chloroplastic-like [Glycine max]
          Length = 288

 Score = 94.7 bits (234), Expect(2) = 4e-21
 Identities = 42/66 (63%), Positives = 56/66 (84%)
 Frame = -3

Query: 528 HSRSISKRLFSRIISLYEHHHMPEKILEVFTDMEELGVRPDDDTVYRVGRAFEILGQSHK 349
           H RS+SKRLFSR+ISLY+HH+MP+KI++VF DMEEL ++PD+DTV RV RAF  LG   K
Sbjct: 193 HMRSVSKRLFSRMISLYDHHNMPDKIIDVFADMEELRLKPDEDTVRRVARAFRELGDEEK 252

Query: 348 KKMLMK 331
           +K+++K
Sbjct: 253 RKLVIK 258



 Score = 31.6 bits (70), Expect(2) = 4e-21
 Identities = 11/17 (64%), Positives = 15/17 (88%)
 Frame = -1

Query: 257 YRKRWRYLYFNGERVRV 207
           Y  +W+Y++FNGERVRV
Sbjct: 260 YGLKWKYIHFNGERVRV 276


>gb|ACU23441.1| unknown [Glycine max]
          Length = 288

 Score = 94.4 bits (233), Expect(2) = 5e-21
 Identities = 42/66 (63%), Positives = 56/66 (84%)
 Frame = -3

Query: 528 HSRSISKRLFSRIISLYEHHHMPEKILEVFTDMEELGVRPDDDTVYRVGRAFEILGQSHK 349
           H RS+SKRLFSR+ISLY+HH+MP+KI++VF DMEEL ++PD+DTV RV RAF  LG   K
Sbjct: 193 HLRSVSKRLFSRMISLYDHHNMPDKIIDVFADMEELRLKPDEDTVRRVARAFRELGDEEK 252

Query: 348 KKMLMK 331
           +K+++K
Sbjct: 253 RKLVIK 258



 Score = 31.6 bits (70), Expect(2) = 5e-21
 Identities = 11/17 (64%), Positives = 15/17 (88%)
 Frame = -1

Query: 257 YRKRWRYLYFNGERVRV 207
           Y  +W+Y++FNGERVRV
Sbjct: 260 YGLKWKYIHFNGERVRV 276


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