BLASTX nr result

ID: Dioscorea21_contig00018793 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00018793
         (1210 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282312.1| PREDICTED: rop guanine nucleotide exchange f...   399   e-108
ref|XP_002528427.1| Rop guanine nucleotide exchange factor, puta...   389   e-106
ref|XP_002312931.1| predicted protein [Populus trichocarpa] gi|2...   380   e-103
ref|XP_004139953.1| PREDICTED: rop guanine nucleotide exchange f...   374   e-101
ref|XP_002306208.1| predicted protein [Populus trichocarpa] gi|2...   373   e-101

>ref|XP_002282312.1| PREDICTED: rop guanine nucleotide exchange factor 1 [Vitis
           vinifera] gi|297744497|emb|CBI37759.3| unnamed protein
           product [Vitis vinifera]
          Length = 587

 Score =  399 bits (1024), Expect = e-108
 Identities = 210/326 (64%), Positives = 230/326 (70%), Gaps = 12/326 (3%)
 Frame = -3

Query: 944 MGSASEEDVSDRQSDRCGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS--PL------ 789
           MGS S E+  D QSDRCG                               +  PL      
Sbjct: 1   MGSVSSEEGVDDQSDRCGSYSLSADVSESESCSSFSCRRYDGEGASSSMTSSPLACRPVV 60

Query: 788 ----LPKARPQAPPMIPGADLVFWEGKPERREPDFAEVEMMKERFSKLLLGEDMSGGGKG 621
                P   P   P+I G D+V W  KPE+RE D +E EMMKERF+KLLLGEDMSGGGKG
Sbjct: 61  GNSSFPVGPPLMLPVIGGRDVVVWGEKPEKRETDLSEAEMMKERFAKLLLGEDMSGGGKG 120

Query: 620 VCTALAISNAITNLSATVFGELWRLEPLAPQRKSMWQREMEWLLCVSDYIVELIPSLQEF 441
           VCTALAISNAITNLSATVFGELWRLEPLAPQ+K+MW REMEWLLCVSD IVEL+PS+Q+F
Sbjct: 121 VCTALAISNAITNLSATVFGELWRLEPLAPQKKAMWCREMEWLLCVSDSIVELVPSIQQF 180

Query: 440 PGGGTFEVMVSRPRSDLYMNLPXXXXXXXXXXXXXDGFRNTEFWYVDRGILVAEADEDSG 261
           PGGGT+EVM +RPRSDLYMNLP             DGF  TEFWYVDRGI+VAEAD    
Sbjct: 181 PGGGTYEVMATRPRSDLYMNLPALKKLDAMLLSMLDGFCETEFWYVDRGIIVAEADNHDA 240

Query: 260 ESCPSSSFGRPSFRQEEKWWLPCPRVPTNGLSEDSRKRLQQCRDCANQILKAAMAINSGV 81
               +SS GRPS RQEEKWWLPCP+VP NGLSED+RKRLQQCRDC NQILKAAMAINS V
Sbjct: 241 YPLSASS-GRPSIRQEEKWWLPCPKVPPNGLSEDARKRLQQCRDCTNQILKAAMAINSSV 299

Query: 80  LAEMEIPDVYLETLPKSGKACLGEII 3
           LAEMEIP  YLETLPK+GKACLG+II
Sbjct: 300 LAEMEIPTAYLETLPKNGKACLGDII 325


>ref|XP_002528427.1| Rop guanine nucleotide exchange factor, putative [Ricinus communis]
           gi|223532163|gb|EEF33969.1| Rop guanine nucleotide
           exchange factor, putative [Ricinus communis]
          Length = 580

 Score =  389 bits (1000), Expect = e-106
 Identities = 204/323 (63%), Positives = 234/323 (72%), Gaps = 9/323 (2%)
 Frame = -3

Query: 944 MGSASEEDVSDRQSDRCGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS-----PLLPK 780
           MGS S +D  D QS+RCG                               +     P LP 
Sbjct: 9   MGSVSSDDGGDEQSERCGSYSLSADVSESESSTSSSFWCRRGFDGEGASTSITSSPPLPS 68

Query: 779 ARP---QAPPMIPGADLVFWEGKPERREPDFAEVEMMKERFSKLLLGEDMSGGGKGVCTA 609
           +     Q P ++P  DL+ W+ KPE+R+ D +EVEMMKERF+KLLLGEDMSGGGKGVCTA
Sbjct: 69  SAKFCFQTPLLLP-KDLLLWDIKPEKRDTDLSEVEMMKERFAKLLLGEDMSGGGKGVCTA 127

Query: 608 LAISNAITNLSATVFGELWRLEPLAPQRKSMWQREMEWLLCVSDYIVELIPSLQEFPGGG 429
           LAISNAITNLSATVFGELWRLEPLAPQ+KSMW+REMEWLLCVSD IVEL+PS+Q+FPGGG
Sbjct: 128 LAISNAITNLSATVFGELWRLEPLAPQKKSMWRREMEWLLCVSDSIVELVPSVQQFPGGG 187

Query: 428 TFEVMVSRPRSDLYMNLPXXXXXXXXXXXXXDGFRNTEFWYVDRGILVAE-ADEDSGESC 252
           T+E+M ++PRSDLY+NLP             DGF  TEFWYVDRGI++A+ AD D   S 
Sbjct: 188 TYEIMAAQPRSDLYVNLPALKKLDAMLISMLDGFCETEFWYVDRGIILADGADNDVYPS- 246

Query: 251 PSSSFGRPSFRQEEKWWLPCPRVPTNGLSEDSRKRLQQCRDCANQILKAAMAINSGVLAE 72
              S GRPS RQEEKWWLPCP++P+NGLSED+RKRLQQCRDC NQILKAAMAINS VLAE
Sbjct: 247 -GFSTGRPSIRQEEKWWLPCPKLPSNGLSEDARKRLQQCRDCTNQILKAAMAINSSVLAE 305

Query: 71  MEIPDVYLETLPKSGKACLGEII 3
           MEIP  YLETLPK GKACLG+II
Sbjct: 306 MEIPTAYLETLPKCGKACLGDII 328


>ref|XP_002312931.1| predicted protein [Populus trichocarpa] gi|222849339|gb|EEE86886.1|
           predicted protein [Populus trichocarpa]
          Length = 577

 Score =  380 bits (975), Expect = e-103
 Identities = 191/259 (73%), Positives = 212/259 (81%), Gaps = 2/259 (0%)
 Frame = -3

Query: 773 PQAPPMIPGADLVFWEGKPE-RREPDFAEVEMMKERFSKLLLGEDMSGGGKGVCTALAIS 597
           P   P+I G D+V W  K E RRE D +EVEMMKERF+KLLLGEDMSGGGKGVCTALAIS
Sbjct: 70  PVMVPVIGGKDVVVWGSKNEKRRETDLSEVEMMKERFAKLLLGEDMSGGGKGVCTALAIS 129

Query: 596 NAITNLSATVFGELWRLEPLAPQRKSMWQREMEWLLCVSDYIVELIPSLQEFPGGGTFEV 417
           NAITNLSATVFGELWRLEPL PQ+KSMW+REMEWLLCVSD IVEL+PS+Q+FPGGGT+EV
Sbjct: 130 NAITNLSATVFGELWRLEPLLPQKKSMWKREMEWLLCVSDSIVELVPSMQQFPGGGTYEV 189

Query: 416 MVSRPRSDLYMNLPXXXXXXXXXXXXXDGFRNTEFWYVDRGILVAEADEDSGESCPSS-S 240
           M +RPRSDLY+NLP             DGF  TEFWYVDRGI+V  AD    ++ PS  S
Sbjct: 190 MATRPRSDLYVNLPALKKLDAMLISMLDGFCETEFWYVDRGIVV--ADGGDCDAYPSGIS 247

Query: 239 FGRPSFRQEEKWWLPCPRVPTNGLSEDSRKRLQQCRDCANQILKAAMAINSGVLAEMEIP 60
            GRPS RQEEKWWLPCP+VP NGLS+D+RKRLQQCRDC NQILKAAMAINS VL EMEIP
Sbjct: 248 GGRPSIRQEEKWWLPCPKVPPNGLSDDARKRLQQCRDCTNQILKAAMAINSSVLVEMEIP 307

Query: 59  DVYLETLPKSGKACLGEII 3
             Y+ETLPK+GKACLG+II
Sbjct: 308 TAYMETLPKNGKACLGDII 326


>ref|XP_004139953.1| PREDICTED: rop guanine nucleotide exchange factor 1-like [Cucumis
           sativus] gi|449475751|ref|XP_004154542.1| PREDICTED: rop
           guanine nucleotide exchange factor 1-like [Cucumis
           sativus]
          Length = 570

 Score =  374 bits (959), Expect = e-101
 Identities = 192/321 (59%), Positives = 228/321 (71%), Gaps = 7/321 (2%)
 Frame = -3

Query: 944 MGSASEEDVSDRQSDRCGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS--PLLPKAR- 774
           MGS S +D SD+ SDRCG                               +  P    A  
Sbjct: 1   MGSVSSDDGSDQLSDRCGSYSLSADVSESESCSSFSCRRFDGEGASSSMASSPHPVSANF 60

Query: 773 ----PQAPPMIPGADLVFWEGKPERREPDFAEVEMMKERFSKLLLGEDMSGGGKGVCTAL 606
               P + P++ G D+  W+ K ++RE D +EVEMMKERF+KLLLGEDMSGGGKGVCTAL
Sbjct: 61  CFPPPVSLPVLGGKDVFVWDDKSKKREADLSEVEMMKERFAKLLLGEDMSGGGKGVCTAL 120

Query: 605 AISNAITNLSATVFGELWRLEPLAPQRKSMWQREMEWLLCVSDYIVELIPSLQEFPGGGT 426
           AISNAITNLSA+VFGELWRLEPLAPQ+++MW REMEWLLCV D IVEL+P++Q FPGGGT
Sbjct: 121 AISNAITNLSASVFGELWRLEPLAPQKRAMWHREMEWLLCVCDSIVELVPTVQPFPGGGT 180

Query: 425 FEVMVSRPRSDLYMNLPXXXXXXXXXXXXXDGFRNTEFWYVDRGILVAEADEDSGESCPS 246
           +EVM+S+PRSDL+MNLP              GF +TEFWYVDRGI++ + + D  +  P 
Sbjct: 181 YEVMMSKPRSDLHMNLPALKKLDALLLGILGGFCHTEFWYVDRGIVLGDLN-DCNDFLPG 239

Query: 245 SSFGRPSFRQEEKWWLPCPRVPTNGLSEDSRKRLQQCRDCANQILKAAMAINSGVLAEME 66
              GRPS RQE+KWWLPCP+VP +GLSED+RKRLQQCRDC NQILKAAMAINS VLAEME
Sbjct: 240 ---GRPSIRQEDKWWLPCPKVPADGLSEDARKRLQQCRDCTNQILKAAMAINSNVLAEME 296

Query: 65  IPDVYLETLPKSGKACLGEII 3
           +P  Y+ETLPKSGKACLG+II
Sbjct: 297 VPAAYMETLPKSGKACLGDII 317


>ref|XP_002306208.1| predicted protein [Populus trichocarpa] gi|222849172|gb|EEE86719.1|
           predicted protein [Populus trichocarpa]
          Length = 576

 Score =  373 bits (957), Expect = e-101
 Identities = 186/259 (71%), Positives = 211/259 (81%), Gaps = 2/259 (0%)
 Frame = -3

Query: 773 PQAPPMIPGADLVFWEGKPERR-EPDFAEVEMMKERFSKLLLGEDMSGGGKGVCTALAIS 597
           P   P+I G D+V W+ K E+R + D +EVEMMKERF+KLLLGEDMSGGGKGVCTALAIS
Sbjct: 70  PVMVPVIGGKDVVVWDSKNEKRGDADLSEVEMMKERFAKLLLGEDMSGGGKGVCTALAIS 129

Query: 596 NAITNLSATVFGELWRLEPLAPQRKSMWQREMEWLLCVSDYIVELIPSLQEFPGGGTFEV 417
           NAITNLSATVFGELWRLEPLA Q+KSMW+REMEWLLCVSD IVEL+PS+Q+FPGGGT+EV
Sbjct: 130 NAITNLSATVFGELWRLEPLALQKKSMWKREMEWLLCVSDSIVELVPSIQQFPGGGTYEV 189

Query: 416 MVSRPRSDLYMNLPXXXXXXXXXXXXXDGFRNTEFWYVDRGILVAEADEDSGESCPSS-S 240
           M +RPRSDLY+NLP             DGF  TEFWY DRGI+V   D    ++ PS  S
Sbjct: 190 MATRPRSDLYVNLPALKKLDAMLITMLDGFSETEFWYADRGIVV--GDGGDCDTYPSGIS 247

Query: 239 FGRPSFRQEEKWWLPCPRVPTNGLSEDSRKRLQQCRDCANQILKAAMAINSGVLAEMEIP 60
            GRPS RQE+KWWLPCP+VP +GLSED+RKRLQQCRDC NQILKAAMAINS VL EMEIP
Sbjct: 248 GGRPSIRQEDKWWLPCPKVPPDGLSEDARKRLQQCRDCTNQILKAAMAINSSVLVEMEIP 307

Query: 59  DVYLETLPKSGKACLGEII 3
             Y+ETLPK+GKACLG+II
Sbjct: 308 TAYMETLPKNGKACLGDII 326


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