BLASTX nr result

ID: Dioscorea21_contig00018789 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00018789
         (354 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277034.2| PREDICTED: zinc finger CCCH domain-containin...    99   4e-19
emb|CAN64331.1| hypothetical protein VITISV_014667 [Vitis vinifera]    99   4e-19
ref|XP_002320858.1| predicted protein [Populus trichocarpa] gi|2...    97   2e-18
ref|XP_002522169.1| RING finger protein 113A, putative [Ricinus ...    96   3e-18
ref|XP_004160720.1| PREDICTED: zinc finger CCCH domain-containin...    94   1e-17

>ref|XP_002277034.2| PREDICTED: zinc finger CCCH domain-containing protein 1-like [Vitis
           vinifera] gi|297745423|emb|CBI40503.3| unnamed protein
           product [Vitis vinifera]
          Length = 331

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 58/113 (51%), Positives = 71/113 (62%), Gaps = 6/113 (5%)
 Frame = +3

Query: 33  DPVCNFFRKDLTNKRIRKRKLNEXXXXXXXXXXHGSEDQQQQPQSMEKTKKPLR-DNKLY 209
           +PVCNFFRK   NK IRKR  +E            +ED +     + + KKP + DNKLY
Sbjct: 22  EPVCNFFRKPTKNKNIRKRTHDEDE----------NEDSKTGTSVLHQQKKPPKPDNKLY 71

Query: 210 FSS-----STADRASDKDSSLFRFESSNEIQVHNDSRATATLETETDFSRDAR 353
           FS+     ST D  + +   +F+FESS EIQV +DSRATATLETETDFSRDAR
Sbjct: 72  FSTGSSRKSTMDEPNKESEPIFQFESSKEIQVQHDSRATATLETETDFSRDAR 124


>emb|CAN64331.1| hypothetical protein VITISV_014667 [Vitis vinifera]
          Length = 846

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 58/113 (51%), Positives = 71/113 (62%), Gaps = 6/113 (5%)
 Frame = +3

Query: 33  DPVCNFFRKDLTNKRIRKRKLNEXXXXXXXXXXHGSEDQQQQPQSMEKTKKPLR-DNKLY 209
           +PVCNFFRK   NK IRKR  +E            +ED +     + + KKP + DNKLY
Sbjct: 459 EPVCNFFRKPTKNKNIRKRMHDEDE----------NEDSKTGTSVLHQQKKPPKPDNKLY 508

Query: 210 FSS-----STADRASDKDSSLFRFESSNEIQVHNDSRATATLETETDFSRDAR 353
           FS+     ST D  + +   +F+FESS EIQV +DSRATATLETETDFSRDAR
Sbjct: 509 FSTGSSRKSTMDEPNKESEPIFQFESSKEIQVQHDSRATATLETETDFSRDAR 561


>ref|XP_002320858.1| predicted protein [Populus trichocarpa] gi|222861631|gb|EEE99173.1|
           predicted protein [Populus trichocarpa]
          Length = 323

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 55/112 (49%), Positives = 71/112 (63%), Gaps = 5/112 (4%)
 Frame = +3

Query: 33  DPVCNFFRKDLTNKRIRKRKLNEXXXXXXXXXXHGSEDQQQQPQSMEKTKK-PLRDNKLY 209
           + VCNFFRK + NK IRKR ++E             ED + Q   +   KK P  DNKLY
Sbjct: 13  EAVCNFFRKPMKNKNIRKRMIDEDE----------DEDSKTQTSLLHSQKKAPKADNKLY 62

Query: 210 FSSSTADRASDKDSS----LFRFESSNEIQVHNDSRATATLETETDFSRDAR 353
           FS+    ++S+ ++     LF+FESS EIQV +DSRATATLETET+FS+DAR
Sbjct: 63  FSTGPLKKSSESNAEPERLLFQFESSKEIQVQHDSRATATLETETEFSKDAR 114


>ref|XP_002522169.1| RING finger protein 113A, putative [Ricinus communis]
           gi|223538607|gb|EEF40210.1| RING finger protein 113A,
           putative [Ricinus communis]
          Length = 325

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 57/121 (47%), Positives = 71/121 (58%), Gaps = 10/121 (8%)
 Frame = +3

Query: 21  SGSDDPVCNFFRKDLTNKRIRKRKLNEXXXXXXXXXXHGSEDQQQQPQSM---EKTKKPL 191
           S   +PVCNFFRK L NK IRKR + +             ED   + +S     + K P 
Sbjct: 7   SEQPEPVCNFFRKPLKNKNIRKRTIEKD-----------EEDDNSKTESSLLHNQKKAPK 55

Query: 192 RDNKLYFSS-------STADRASDKDSSLFRFESSNEIQVHNDSRATATLETETDFSRDA 350
            DNKLYFS+       S A+   + D  +F+FESS EIQV +DSRATATLETET+FS+DA
Sbjct: 56  PDNKLYFSTGPSKNSLSAAESVVESDRPVFQFESSKEIQVQHDSRATATLETETEFSKDA 115

Query: 351 R 353
           R
Sbjct: 116 R 116


>ref|XP_004160720.1| PREDICTED: zinc finger CCCH domain-containing protein 1-like
           [Cucumis sativus]
          Length = 300

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 55/114 (48%), Positives = 71/114 (62%), Gaps = 7/114 (6%)
 Frame = +3

Query: 33  DPVCNFFRKDLTNKRIRKRKLNEXXXXXXXXXXHGSEDQQQQPQSMEKTKK-PLRDNKLY 209
           + VC+FFRK   NK IRKR ++E             ED + +   +   KK P  ++KLY
Sbjct: 11  EQVCSFFRKPTKNKNIRKRTVDEDE----------EEDSKAETSFLLNQKKAPKTESKLY 60

Query: 210 FSSSTADRASDKDSS------LFRFESSNEIQVHNDSRATATLETETDFSRDAR 353
           FSS  +  +S  +S+      +F+FESS EIQVH+DSRATATLETETDFSRDAR
Sbjct: 61  FSSGPSKNSSSNESNVEPNKPIFQFESSKEIQVHHDSRATATLETETDFSRDAR 114


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