BLASTX nr result
ID: Dioscorea21_contig00018789
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00018789 (354 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002277034.2| PREDICTED: zinc finger CCCH domain-containin... 99 4e-19 emb|CAN64331.1| hypothetical protein VITISV_014667 [Vitis vinifera] 99 4e-19 ref|XP_002320858.1| predicted protein [Populus trichocarpa] gi|2... 97 2e-18 ref|XP_002522169.1| RING finger protein 113A, putative [Ricinus ... 96 3e-18 ref|XP_004160720.1| PREDICTED: zinc finger CCCH domain-containin... 94 1e-17 >ref|XP_002277034.2| PREDICTED: zinc finger CCCH domain-containing protein 1-like [Vitis vinifera] gi|297745423|emb|CBI40503.3| unnamed protein product [Vitis vinifera] Length = 331 Score = 99.0 bits (245), Expect = 4e-19 Identities = 58/113 (51%), Positives = 71/113 (62%), Gaps = 6/113 (5%) Frame = +3 Query: 33 DPVCNFFRKDLTNKRIRKRKLNEXXXXXXXXXXHGSEDQQQQPQSMEKTKKPLR-DNKLY 209 +PVCNFFRK NK IRKR +E +ED + + + KKP + DNKLY Sbjct: 22 EPVCNFFRKPTKNKNIRKRTHDEDE----------NEDSKTGTSVLHQQKKPPKPDNKLY 71 Query: 210 FSS-----STADRASDKDSSLFRFESSNEIQVHNDSRATATLETETDFSRDAR 353 FS+ ST D + + +F+FESS EIQV +DSRATATLETETDFSRDAR Sbjct: 72 FSTGSSRKSTMDEPNKESEPIFQFESSKEIQVQHDSRATATLETETDFSRDAR 124 >emb|CAN64331.1| hypothetical protein VITISV_014667 [Vitis vinifera] Length = 846 Score = 99.0 bits (245), Expect = 4e-19 Identities = 58/113 (51%), Positives = 71/113 (62%), Gaps = 6/113 (5%) Frame = +3 Query: 33 DPVCNFFRKDLTNKRIRKRKLNEXXXXXXXXXXHGSEDQQQQPQSMEKTKKPLR-DNKLY 209 +PVCNFFRK NK IRKR +E +ED + + + KKP + DNKLY Sbjct: 459 EPVCNFFRKPTKNKNIRKRMHDEDE----------NEDSKTGTSVLHQQKKPPKPDNKLY 508 Query: 210 FSS-----STADRASDKDSSLFRFESSNEIQVHNDSRATATLETETDFSRDAR 353 FS+ ST D + + +F+FESS EIQV +DSRATATLETETDFSRDAR Sbjct: 509 FSTGSSRKSTMDEPNKESEPIFQFESSKEIQVQHDSRATATLETETDFSRDAR 561 >ref|XP_002320858.1| predicted protein [Populus trichocarpa] gi|222861631|gb|EEE99173.1| predicted protein [Populus trichocarpa] Length = 323 Score = 96.7 bits (239), Expect = 2e-18 Identities = 55/112 (49%), Positives = 71/112 (63%), Gaps = 5/112 (4%) Frame = +3 Query: 33 DPVCNFFRKDLTNKRIRKRKLNEXXXXXXXXXXHGSEDQQQQPQSMEKTKK-PLRDNKLY 209 + VCNFFRK + NK IRKR ++E ED + Q + KK P DNKLY Sbjct: 13 EAVCNFFRKPMKNKNIRKRMIDEDE----------DEDSKTQTSLLHSQKKAPKADNKLY 62 Query: 210 FSSSTADRASDKDSS----LFRFESSNEIQVHNDSRATATLETETDFSRDAR 353 FS+ ++S+ ++ LF+FESS EIQV +DSRATATLETET+FS+DAR Sbjct: 63 FSTGPLKKSSESNAEPERLLFQFESSKEIQVQHDSRATATLETETEFSKDAR 114 >ref|XP_002522169.1| RING finger protein 113A, putative [Ricinus communis] gi|223538607|gb|EEF40210.1| RING finger protein 113A, putative [Ricinus communis] Length = 325 Score = 95.9 bits (237), Expect = 3e-18 Identities = 57/121 (47%), Positives = 71/121 (58%), Gaps = 10/121 (8%) Frame = +3 Query: 21 SGSDDPVCNFFRKDLTNKRIRKRKLNEXXXXXXXXXXHGSEDQQQQPQSM---EKTKKPL 191 S +PVCNFFRK L NK IRKR + + ED + +S + K P Sbjct: 7 SEQPEPVCNFFRKPLKNKNIRKRTIEKD-----------EEDDNSKTESSLLHNQKKAPK 55 Query: 192 RDNKLYFSS-------STADRASDKDSSLFRFESSNEIQVHNDSRATATLETETDFSRDA 350 DNKLYFS+ S A+ + D +F+FESS EIQV +DSRATATLETET+FS+DA Sbjct: 56 PDNKLYFSTGPSKNSLSAAESVVESDRPVFQFESSKEIQVQHDSRATATLETETEFSKDA 115 Query: 351 R 353 R Sbjct: 116 R 116 >ref|XP_004160720.1| PREDICTED: zinc finger CCCH domain-containing protein 1-like [Cucumis sativus] Length = 300 Score = 94.0 bits (232), Expect = 1e-17 Identities = 55/114 (48%), Positives = 71/114 (62%), Gaps = 7/114 (6%) Frame = +3 Query: 33 DPVCNFFRKDLTNKRIRKRKLNEXXXXXXXXXXHGSEDQQQQPQSMEKTKK-PLRDNKLY 209 + VC+FFRK NK IRKR ++E ED + + + KK P ++KLY Sbjct: 11 EQVCSFFRKPTKNKNIRKRTVDEDE----------EEDSKAETSFLLNQKKAPKTESKLY 60 Query: 210 FSSSTADRASDKDSS------LFRFESSNEIQVHNDSRATATLETETDFSRDAR 353 FSS + +S +S+ +F+FESS EIQVH+DSRATATLETETDFSRDAR Sbjct: 61 FSSGPSKNSSSNESNVEPNKPIFQFESSKEIQVHHDSRATATLETETDFSRDAR 114