BLASTX nr result

ID: Dioscorea21_contig00018766 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00018766
         (226 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004138110.1| PREDICTED: putative exosome complex componen...    98   8e-19
ref|XP_002456088.1| hypothetical protein SORBIDRAFT_03g030230 [S...    96   4e-18
pir||D84647 hypothetical protein At2g25350 [imported] - Arabidop...    95   5e-18
ref|XP_002878850.1| hypothetical protein ARALYDRAFT_320337 [Arab...    95   5e-18
ref|XP_002282635.1| PREDICTED: putative exosome complex componen...    95   5e-18

>ref|XP_004138110.1| PREDICTED: putative exosome complex component rrp40-like [Cucumis
           sativus] gi|449477413|ref|XP_004155016.1| PREDICTED:
           putative exosome complex component rrp40-like [Cucumis
           sativus]
          Length = 243

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 47/58 (81%), Positives = 55/58 (94%)
 Frame = +1

Query: 1   PVLEALGKKMSFETAIGLNGRVWVNAPAPSTIILVSNAIINSEFLSGAQQRIMVEKLV 174
           PVLE+LGKK+SFETA+GLNGRVWVNA +PSTII+VSNAI+NSE LSG QQRIMV+KL+
Sbjct: 179 PVLESLGKKLSFETAVGLNGRVWVNADSPSTIIVVSNAILNSETLSGVQQRIMVDKLL 236


>ref|XP_002456088.1| hypothetical protein SORBIDRAFT_03g030230 [Sorghum bicolor]
           gi|241928063|gb|EES01208.1| hypothetical protein
           SORBIDRAFT_03g030230 [Sorghum bicolor]
          Length = 239

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 47/62 (75%), Positives = 54/62 (87%)
 Frame = +1

Query: 1   PVLEALGKKMSFETAIGLNGRVWVNAPAPSTIILVSNAIINSEFLSGAQQRIMVEKLVQR 180
           PVLEALGKK+SFE A+GLNGRVWVNAPA ST+ILVSNAI+ SE LSG +QR MVE L++R
Sbjct: 178 PVLEALGKKLSFEIAVGLNGRVWVNAPAASTVILVSNAIMRSESLSGIKQRAMVENLLER 237

Query: 181 FS 186
            S
Sbjct: 238 LS 239


>pir||D84647 hypothetical protein At2g25350 [imported] - Arabidopsis thaliana
          Length = 728

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 45/63 (71%), Positives = 55/63 (87%)
 Frame = +1

Query: 1   PVLEALGKKMSFETAIGLNGRVWVNAPAPSTIILVSNAIINSEFLSGAQQRIMVEKLVQR 180
           PVLEALGKK+SFETA GLNGR WV+A AP  +I+V+NA++NSE LSG QQRIMVEKL+++
Sbjct: 666 PVLEALGKKLSFETAFGLNGRCWVHAAAPRIVIIVANALMNSETLSGTQQRIMVEKLLEK 725

Query: 181 FSD 189
            SD
Sbjct: 726 ISD 728


>ref|XP_002878850.1| hypothetical protein ARALYDRAFT_320337 [Arabidopsis lyrata subsp.
           lyrata] gi|297324689|gb|EFH55109.1| hypothetical protein
           ARALYDRAFT_320337 [Arabidopsis lyrata subsp. lyrata]
          Length = 702

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 45/63 (71%), Positives = 55/63 (87%)
 Frame = +1

Query: 1   PVLEALGKKMSFETAIGLNGRVWVNAPAPSTIILVSNAIINSEFLSGAQQRIMVEKLVQR 180
           PVLEALGKK+SFETA GLNGR WV+A AP  +I+V+NA++NSE LSG QQRIMVEKL+++
Sbjct: 640 PVLEALGKKLSFETAFGLNGRCWVHAAAPRIVIIVANALMNSETLSGTQQRIMVEKLLEK 699

Query: 181 FSD 189
            SD
Sbjct: 700 ISD 702


>ref|XP_002282635.1| PREDICTED: putative exosome complex component rrp40 [Vitis
           vinifera] gi|297733775|emb|CBI15022.3| unnamed protein
           product [Vitis vinifera]
          Length = 237

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 46/60 (76%), Positives = 55/60 (91%)
 Frame = +1

Query: 1   PVLEALGKKMSFETAIGLNGRVWVNAPAPSTIILVSNAIINSEFLSGAQQRIMVEKLVQR 180
           PVLEALGKK+SFE A+GLNGRVWVNA +PST+ILV+NAI+NSE LS  QQ+IMV+KL+QR
Sbjct: 176 PVLEALGKKLSFEIAVGLNGRVWVNASSPSTVILVANAIMNSESLSVVQQKIMVDKLLQR 235


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