BLASTX nr result

ID: Dioscorea21_contig00018748 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00018748
         (239 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19280.3| unnamed protein product [Vitis vinifera]              105   5e-21
ref|XP_002283768.1| PREDICTED: uncharacterized protein LOC100248...   105   5e-21
emb|CAN68129.1| hypothetical protein VITISV_043707 [Vitis vinifera]   105   5e-21
ref|NP_001151503.1| rab geranylgeranyl transferase like protein ...   103   1e-20
ref|XP_002437444.1| hypothetical protein SORBIDRAFT_10g027180 [S...   103   2e-20

>emb|CBI19280.3| unnamed protein product [Vitis vinifera]
          Length = 269

 Score =  105 bits (261), Expect = 5e-21
 Identities = 52/73 (71%), Positives = 59/73 (80%), Gaps = 3/73 (4%)
 Frame = +1

Query: 16  MHGRPRNAPRSEE---SAAKAGKLRDLQAQLLHNHHNRIYTNEARAASARLLEINPEIYT 186
           MHGRPR AP+ E+   SAAKA KLR LQ+QLLHNHHN+IYT EA   SA+LLE NPE YT
Sbjct: 1   MHGRPRKAPKPEDAAASAAKAEKLRALQSQLLHNHHNQIYTKEALEISAKLLEANPESYT 60

Query: 187 AWNYRKLALQSNL 225
           AWNYRKLA++ NL
Sbjct: 61  AWNYRKLAVEHNL 73


>ref|XP_002283768.1| PREDICTED: uncharacterized protein LOC100248920 [Vitis vinifera]
          Length = 704

 Score =  105 bits (261), Expect = 5e-21
 Identities = 52/73 (71%), Positives = 59/73 (80%), Gaps = 3/73 (4%)
 Frame = +1

Query: 16  MHGRPRNAPRSEE---SAAKAGKLRDLQAQLLHNHHNRIYTNEARAASARLLEINPEIYT 186
           MHGRPR AP+ E+   SAAKA KLR LQ+QLLHNHHN+IYT EA   SA+LLE NPE YT
Sbjct: 1   MHGRPRKAPKPEDAAASAAKAEKLRALQSQLLHNHHNQIYTKEALEISAKLLEANPESYT 60

Query: 187 AWNYRKLALQSNL 225
           AWNYRKLA++ NL
Sbjct: 61  AWNYRKLAVEHNL 73


>emb|CAN68129.1| hypothetical protein VITISV_043707 [Vitis vinifera]
          Length = 542

 Score =  105 bits (261), Expect = 5e-21
 Identities = 52/73 (71%), Positives = 59/73 (80%), Gaps = 3/73 (4%)
 Frame = +1

Query: 16  MHGRPRNAPRSEE---SAAKAGKLRDLQAQLLHNHHNRIYTNEARAASARLLEINPEIYT 186
           MHGRPR AP+ E+   SAAKA KLR LQ+QLLHNHHN+IYT EA   SA+LLE NPE YT
Sbjct: 1   MHGRPRKAPKPEDAAASAAKAEKLRALQSQLLHNHHNQIYTKEALEISAKLLEANPESYT 60

Query: 187 AWNYRKLALQSNL 225
           AWNYRKLA++ NL
Sbjct: 61  AWNYRKLAVEHNL 73


>ref|NP_001151503.1| rab geranylgeranyl transferase like protein [Zea mays]
           gi|195647272|gb|ACG43104.1| rab geranylgeranyl
           transferase like protein [Zea mays]
          Length = 693

 Score =  103 bits (258), Expect = 1e-20
 Identities = 53/77 (68%), Positives = 59/77 (76%), Gaps = 3/77 (3%)
 Frame = +1

Query: 16  MHGRPRNA--PRSEESA-AKAGKLRDLQAQLLHNHHNRIYTNEARAASARLLEINPEIYT 186
           MHGRPR    P  EE+A AKA KLRDLQAQ+LHNHH R YT EA   S +LLEINPE YT
Sbjct: 1   MHGRPRRPAKPEDEEAASAKAAKLRDLQAQVLHNHHGRTYTKEAIGLSFKLLEINPEAYT 60

Query: 187 AWNYRKLALQSNLKEVT 237
           AWNYRKLA Q N+KE++
Sbjct: 61  AWNYRKLAFQHNVKELS 77


>ref|XP_002437444.1| hypothetical protein SORBIDRAFT_10g027180 [Sorghum bicolor]
           gi|241915667|gb|EER88811.1| hypothetical protein
           SORBIDRAFT_10g027180 [Sorghum bicolor]
          Length = 693

 Score =  103 bits (256), Expect = 2e-20
 Identities = 53/77 (68%), Positives = 59/77 (76%), Gaps = 3/77 (3%)
 Frame = +1

Query: 16  MHGRPRNA--PRSEESA-AKAGKLRDLQAQLLHNHHNRIYTNEARAASARLLEINPEIYT 186
           MHGRPR    P  EE+A AKA KLRDLQAQ+LHNHH R YT EA   S +LLEINPE YT
Sbjct: 1   MHGRPRRPAKPEDEEAASAKAAKLRDLQAQVLHNHHARTYTKEAIGLSFKLLEINPEAYT 60

Query: 187 AWNYRKLALQSNLKEVT 237
           AWNYRKLA Q N+KE++
Sbjct: 61  AWNYRKLAFQHNVKELS 77


Top