BLASTX nr result

ID: Dioscorea21_contig00018745 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00018745
         (362 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002871756.1| SET domain-containing protein [Arabidopsis l...   122   3e-26
ref|XP_003563142.1| PREDICTED: protein SET DOMAIN GROUP 40-like ...   121   7e-26
ref|NP_197226.2| protein SET DOMAIN GROUP 40 [Arabidopsis thalia...   119   2e-25
ref|XP_004145844.1| PREDICTED: protein SET DOMAIN GROUP 40-like ...   116   2e-24
ref|XP_002305239.1| SET domain protein [Populus trichocarpa] gi|...   116   2e-24

>ref|XP_002871756.1| SET domain-containing protein [Arabidopsis lyrata subsp. lyrata]
           gi|297317593|gb|EFH48015.1| SET domain-containing
           protein [Arabidopsis lyrata subsp. lyrata]
          Length = 493

 Score =  122 bits (306), Expect = 3e-26
 Identities = 62/107 (57%), Positives = 77/107 (71%)
 Frame = +1

Query: 40  RWAAMVGIXXXXXXXXXXXXXXCLGHSLAVASFPDAGGRGLAAVRDLKKGELVLRVPRSA 219
           RWAA +GI              CLGHSL+VA FP AGGRGL AVR+LKKGELVL+VPR+A
Sbjct: 16  RWAAEIGISDSIDSSRYRDS--CLGHSLSVADFPHAGGRGLGAVRELKKGELVLKVPRNA 73

Query: 220 LLTRERVVDADEKLSGCIKRHPCLSSTQILTVCLLVEVGKGRKSWWY 360
           L+T E ++  D KL+  +  H  LSSTQIL+VCLL E+GKG++S+WY
Sbjct: 74  LMTTESMIAKDRKLNDAVILHGSLSSTQILSVCLLYEMGKGKRSFWY 120


>ref|XP_003563142.1| PREDICTED: protein SET DOMAIN GROUP 40-like [Brachypodium
           distachyon]
          Length = 480

 Score =  121 bits (303), Expect = 7e-26
 Identities = 64/108 (59%), Positives = 75/108 (69%), Gaps = 1/108 (0%)
 Frame = +1

Query: 40  RWAAMVGIXXXXXXXXXXXXXXCLGHSLAVASFPDAGGRGLAAVRDLKKGELVLRVPRSA 219
           RWAA +G+              CLGHSL VA FPDAGGRG AA RDL++GELVLRVPR+A
Sbjct: 6   RWAAELGVSDSPSSTSSSSS--CLGHSLVVADFPDAGGRGFAAARDLRRGELVLRVPRAA 63

Query: 220 LLTRERVVDADEKLSGCI-KRHPCLSSTQILTVCLLVEVGKGRKSWWY 360
           LLT +RV+  D +++ CI  RHP LSS Q L VCLL EVGKG+ S WY
Sbjct: 64  LLTSDRVMADDPEIASCIAARHPRLSSVQRLIVCLLAEVGKGKSSSWY 111


>ref|NP_197226.2| protein SET DOMAIN GROUP 40 [Arabidopsis thaliana]
           gi|75271674|sp|Q6NQJ8.1|SDG40_ARATH RecName:
           Full=Protein SET DOMAIN GROUP 40
           gi|34222078|gb|AAQ62875.1| At5g17240 [Arabidopsis
           thaliana] gi|51969984|dbj|BAD43684.1| unknown protein
           [Arabidopsis thaliana] gi|332005020|gb|AED92403.1|
           protein SET DOMAIN GROUP 40 [Arabidopsis thaliana]
          Length = 491

 Score =  119 bits (299), Expect = 2e-25
 Identities = 61/107 (57%), Positives = 74/107 (69%)
 Frame = +1

Query: 40  RWAAMVGIXXXXXXXXXXXXXXCLGHSLAVASFPDAGGRGLAAVRDLKKGELVLRVPRSA 219
           RWAA +GI              CLGHSL+V+ FPDAGGRGL A R+LKKGELVL+VPR A
Sbjct: 13  RWAAEIGISDSIDSSRFRDS--CLGHSLSVSDFPDAGGRGLGAARELKKGELVLKVPRKA 70

Query: 220 LLTRERVVDADEKLSGCIKRHPCLSSTQILTVCLLVEVGKGRKSWWY 360
           L+T E ++  D KLS  +  H  LSSTQIL+VCLL E+ K +KS+WY
Sbjct: 71  LMTTESIIAKDLKLSDAVNLHNSLSSTQILSVCLLYEMSKEKKSFWY 117


>ref|XP_004145844.1| PREDICTED: protein SET DOMAIN GROUP 40-like [Cucumis sativus]
          Length = 483

 Score =  116 bits (291), Expect = 2e-24
 Identities = 62/107 (57%), Positives = 70/107 (65%)
 Frame = +1

Query: 40  RWAAMVGIXXXXXXXXXXXXXXCLGHSLAVASFPDAGGRGLAAVRDLKKGELVLRVPRSA 219
           RWAA  GI              CLGHSL V+ FPD GGRGLAAVR LKKGELVLR P+S 
Sbjct: 12  RWAADHGISDSVDQPTSHS---CLGHSLCVSFFPDTGGRGLAAVRQLKKGELVLRAPKSI 68

Query: 220 LLTRERVVDADEKLSGCIKRHPCLSSTQILTVCLLVEVGKGRKSWWY 360
           LLT + +   DEKL   +KR+P LSSTQ LT CLL E+ KG  SWW+
Sbjct: 69  LLTTQSLSLEDEKLDMALKRYPSLSSTQKLTFCLLYEISKGPSSWWF 115


>ref|XP_002305239.1| SET domain protein [Populus trichocarpa]
           gi|222848203|gb|EEE85750.1| SET domain protein [Populus
           trichocarpa]
          Length = 518

 Score =  116 bits (290), Expect = 2e-24
 Identities = 63/111 (56%), Positives = 75/111 (67%), Gaps = 4/111 (3%)
 Frame = +1

Query: 40  RWAAMVGIXXXXXXXXXXXXXX--CLGHSLAVASFPDAGGRGLAAVRDLKKGELVLRVPR 213
           +WAA +GI                CLGHSL V+ FPDAGGRGLAAVRDLKKGELVLRVP+
Sbjct: 42  KWAANLGISDCTTNLSLHPQSPTSCLGHSLTVSHFPDAGGRGLAAVRDLKKGELVLRVPK 101

Query: 214 SALLTRERVVDADEKLSGCIKR--HPCLSSTQILTVCLLVEVGKGRKSWWY 360
           S L+TR+ ++  DEKL   +    +  LS TQIL VCLL E+GKG+ SWWY
Sbjct: 102 SVLITRDSLL-KDEKLCSFVNNNTYSSLSPTQILAVCLLYEMGKGKSSWWY 151


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